FFCP PHASE1:Hg19::chr17:36720259..36720277,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80725|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29506|TSSclassifier=S|UniProt=Q9C0H9|association_with_transcript=-27bp_to_uc002hqf.1_5end|coexpression_cluster_id=C11|description=CAGE_peak_14_at_SRCIN1_5end|id=chr17:36720259..36720277,-|ontology_enrichment_celltype=CL:0002322!1.68e-12!5;CL:0000039!5.13e-10!7;CL:0000586!5.13e-10!7|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3|ontology_enrichment_disease=DOID:3095!5.34e-14!22;DOID:2994!5.34e-14!22;DOID:171!2.52e-10!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.01e-35!57;UBERON:0005068!7.01e-35!57;UBERON:0006241!7.01e-35!57;UBERON:0007135!7.01e-35!57;UBERON:0001017!2.73e-31!82;UBERON:0002346!4.56e-31!90;UBERON:0000073!1.22e-30!94;UBERON:0001016!1.22e-30!94;UBERON:0005743!1.48e-29!86;UBERON:0002616!1.03e-27!59;UBERON:0000955!3.15e-27!69;UBERON:0006238!3.15e-27!69;UBERON:0003076!1.65e-26!15;UBERON:0003057!1.65e-26!15;UBERON:0003075!1.78e-25!86;UBERON:0007284!1.78e-25!86;UBERON:0004733!9.56e-22!12;UBERON:0002028!9.56e-22!12;UBERON:0007277!9.56e-22!12;UBERON:0004732!5.75e-20!13;UBERON:0000924!1.33e-17!173;UBERON:0006601!1.33e-17!173;UBERON:0002680!9.61e-17!9;UBERON:0001895!9.61e-17!9;UBERON:0010092!9.61e-17!9;UBERON:0002020!1.59e-16!34;UBERON:0003528!1.59e-16!34;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0003080!4.28e-15!42;UBERON:0007023!1.66e-14!115;UBERON:0002791!1.90e-14!33;UBERON:0004121!3.66e-14!169;UBERON:0001950!4.31e-14!20;UBERON:0001893!5.82e-14!34;UBERON:0000153!2.59e-13!129;UBERON:0007811!2.59e-13!129;UBERON:0000988!5.12e-13!3;UBERON:0000033!5.87e-13!123;UBERON:0002298!6.09e-13!8;UBERON:0002619!1.00e-12!22;UBERON:0001869!1.76e-12!32;UBERON:0003056!4.39e-11!61;UBERON:0000956!4.54e-11!25;UBERON:0000203!4.54e-11!25;UBERON:0000025!8.87e-10!194;UBERON:0002148!4.15e-09!2;UBERON:0009662!4.15e-09!2;UBERON:0000473!9.14e-09!8;UBERON:0002021!5.03e-08!5;UBERON:0001872!5.67e-08!5;UBERON:0002037!2.74e-07!6;UBERON:0006215!2.74e-07!6;UBERON:0002308!3.66e-07!9;UBERON:0000125!3.66e-07!9|ontology_enrichment_uberon_v019=UBERON:0002037;3.16e-43;6!UBERON:0004733;3.54e-38;12!UBERON:0002028;3.54e-38;12!UBERON:0004732;2.68e-35;13!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0000073;4.61e-11;53!UBERON:0002616;4.61e-11;53!UBERON:0001896;1.04e-10;3!UBERON:0005290;1.04e-10;3!UBERON:0002346;2.35e-08;4!UBERON:0000923;2.35e-08;4!UBERON:0010316;2.35e-08;4!UBERON:0005291;2.35e-08;4!UBERON:0001016;8.65e-08;83!UBERON:0001872;6.21e-07;5!UBERON:0002050;6.21e-07;5!UBERON:0005423;6.21e-07;5!UBERON:0000955;6.94e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0004733,3.07e-38,12;UBERON:0002028,3.07e-38,12;UBERON:0007277,3.07e-38,12;UBERON:0004732,2.34e-35,13;UBERON:0003076,9.68e-31,15;UBERON:0003057,9.68e-31,15;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0000073,1.76e-13,53;UBERON:0002616,1.76e-13,53;UBERON:0001049,8.65e-13,56;UBERON:0005068,8.65e-13,56;UBERON:0006241,8.65e-13,56;UBERON:0007135,8.65e-13,56;UBERON:0002346,5.68e-12,86;UBERON:0001896,8.99e-11,3;UBERON:0005290,8.99e-11,3;UBERON:0010096,8.99e-11,3;UBERON:0000955,1.78e-10,68;UBERON:0006238,1.78e-10,68;UBERON:0001017,7.02e-09,81;UBERON:0003075,7.02e-09,82;UBERON:0007284,7.02e-09,82;UBERON:0001016,4.90e-08,89;UBERON:0010371,4.54e-07,104;UBERON:0001872,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,38.1454340792708,33.0631987194362,11.2308095202348,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0.46852889145067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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29506 | |||
|TSSclassifier=S | |||
|UniProt=Q9C0H9 | |||
|association_with_transcript=-27bp_to_uc002hqf.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_14_at_SRCIN1_5end | |||
|id=chr17:36720259..36720277,- | |||
|ontology_enrichment_celltype=CL:0002322!1.68e-12!5;CL:0000039!5.13e-10!7;CL:0000586!5.13e-10!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | |||
|ontology_enrichment_disease=DOID:3095!5.34e-14!22;DOID:2994!5.34e-14!22;DOID:171!2.52e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.01e-35!57;UBERON:0005068!7.01e-35!57;UBERON:0006241!7.01e-35!57;UBERON:0007135!7.01e-35!57;UBERON:0001017!2.73e-31!82;UBERON:0002346!4.56e-31!90;UBERON:0000073!1.22e-30!94;UBERON:0001016!1.22e-30!94;UBERON:0005743!1.48e-29!86;UBERON:0002616!1.03e-27!59;UBERON:0000955!3.15e-27!69;UBERON:0006238!3.15e-27!69;UBERON:0003076!1.65e-26!15;UBERON:0003057!1.65e-26!15;UBERON:0003075!1.78e-25!86;UBERON:0007284!1.78e-25!86;UBERON:0004733!9.56e-22!12;UBERON:0002028!9.56e-22!12;UBERON:0007277!9.56e-22!12;UBERON:0004732!5.75e-20!13;UBERON:0000924!1.33e-17!173;UBERON:0006601!1.33e-17!173;UBERON:0002680!9.61e-17!9;UBERON:0001895!9.61e-17!9;UBERON:0010092!9.61e-17!9;UBERON:0002020!1.59e-16!34;UBERON:0003528!1.59e-16!34;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0003080!4.28e-15!42;UBERON:0007023!1.66e-14!115;UBERON:0002791!1.90e-14!33;UBERON:0004121!3.66e-14!169;UBERON:0001950!4.31e-14!20;UBERON:0001893!5.82e-14!34;UBERON:0000153!2.59e-13!129;UBERON:0007811!2.59e-13!129;UBERON:0000988!5.12e-13!3;UBERON:0000033!5.87e-13!123;UBERON:0002298!6.09e-13!8;UBERON:0002619!1.00e-12!22;UBERON:0001869!1.76e-12!32;UBERON:0003056!4.39e-11!61;UBERON:0000956!4.54e-11!25;UBERON:0000203!4.54e-11!25;UBERON:0000025!8.87e-10!194;UBERON:0002148!4.15e-09!2;UBERON:0009662!4.15e-09!2;UBERON:0000473!9.14e-09!8;UBERON:0002021!5.03e-08!5;UBERON:0001872!5.67e-08!5;UBERON:0002037!2.74e-07!6;UBERON:0006215!2.74e-07!6;UBERON:0002308!3.66e-07!9;UBERON:0000125!3.66e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.16e-43;6!UBERON:0004733;3.54e-38;12!UBERON:0002028;3.54e-38;12!UBERON:0004732;2.68e-35;13!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0000073;4.61e-11;53!UBERON:0002616;4.61e-11;53!UBERON:0001896;1.04e-10;3!UBERON:0005290;1.04e-10;3!UBERON:0002346;2.35e-08;4!UBERON:0000923;2.35e-08;4!UBERON:0010316;2.35e-08;4!UBERON:0005291;2.35e-08;4!UBERON:0001016;8.65e-08;83!UBERON:0001872;6.21e-07;5!UBERON:0002050;6.21e-07;5!UBERON:0005423;6.21e-07;5!UBERON:0000955;6.94e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0004733,3.07e-38,12;UBERON:0002028,3.07e-38,12;UBERON:0007277,3.07e-38,12;UBERON:0004732,2.34e-35,13;UBERON:0003076,9.68e-31,15;UBERON:0003057,9.68e-31,15;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0000073,1.76e-13,53;UBERON:0002616,1.76e-13,53;UBERON:0001049,8.65e-13,56;UBERON:0005068,8.65e-13,56;UBERON:0006241,8.65e-13,56;UBERON:0007135,8.65e-13,56;UBERON:0002346,5.68e-12,86;UBERON:0001896,8.99e-11,3;UBERON:0005290,8.99e-11,3;UBERON:0010096,8.99e-11,3;UBERON:0000955,1.78e-10,68;UBERON:0006238,1.78e-10,68;UBERON:0001017,7.02e-09,81;UBERON:0003075,7.02e-09,82;UBERON:0007284,7.02e-09,82;UBERON:0001016,4.90e-08,89;UBERON:0010371,4.54e-07,104;UBERON:0001872,6.77e-07,5 | |||
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|short_description=p14@SRCIN1 | |||
}} |
Revision as of 13:12, 11 September 2013
Short description: | p14@SRCIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SRCIN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -27bp_to_uc002hqf.1_5end |
EntrezGene: | SRCIN1 |
HGNC: | 29506 |
UniProt: | Q9C0H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.16e-43 | 6 |
rhombic lip | 3.16e-43 | 6 |
segmental subdivision of hindbrain | 3.07e-38 | 12 |
hindbrain | 3.07e-38 | 12 |
presumptive hindbrain | 3.07e-38 | 12 |
segmental subdivision of nervous system | 2.34e-35 | 13 |
posterior neural tube | 9.68e-31 | 15 |
chordal neural plate | 9.68e-31 | 15 |
regional part of metencephalon | 3.84e-29 | 9 |
metencephalon | 3.84e-29 | 9 |
future metencephalon | 3.84e-29 | 9 |
regional part of nervous system | 1.76e-13 | 53 |
regional part of brain | 1.76e-13 | 53 |
neural tube | 8.65e-13 | 56 |
neural rod | 8.65e-13 | 56 |
future spinal cord | 8.65e-13 | 56 |
neural keel | 8.65e-13 | 56 |
neurectoderm | 5.68e-12 | 86 |
medulla oblongata | 8.99e-11 | 3 |
myelencephalon | 8.99e-11 | 3 |
future myelencephalon | 8.99e-11 | 3 |
brain | 1.78e-10 | 68 |
future brain | 1.78e-10 | 68 |
central nervous system | 7.02e-09 | 81 |
neural plate | 7.02e-09 | 82 |
presumptive neural plate | 7.02e-09 | 82 |
nervous system | 4.90e-08 | 89 |
ecto-epithelium | 4.54e-07 | 104 |
parietal lobe | 6.77e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.