FFCP PHASE1:Hg19::chr17:10102156..10102163,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4169|TSSclassifier=W|UniProt=O60861,F5H2K0|association_with_transcript=-288bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end|coexpression_cluster_id=C1427|description=CAGE_peak_23_at_GAS7_5end|id=chr17:10102156..10102163,-|ontology_enrichment_celltype=CL:0000557!8.99e-31!71;CL:0000839!7.31e-30!70;CL:0000766!7.87e-30!76;CL:0002057!1.22e-28!42;CL:0002194!3.73e-27!63;CL:0000576!3.73e-27!63;CL:0000040!3.73e-27!63;CL:0000559!3.73e-27!63;CL:0002009!1.15e-25!65;CL:0000860!1.55e-25!45;CL:0000763!5.64e-16!112;CL:0000049!5.64e-16!112;CL:0002031!1.90e-14!124;CL:0000738!4.88e-14!140;CL:0002087!1.33e-13!119;CL:0000037!1.16e-09!172;CL:0000566!1.16e-09!172;CL:0002032!3.26e-09!165;CL:0000837!3.26e-09!165;CL:0000988!2.29e-08!182;CL:0002393!1.74e-07!9;CL:0002397!1.74e-07!9|ontology_enrichment_celltype_v019=CL:0000860;4.26e-34;33!CL:0002057;4.26e-34;33!CL:0000473;1.81e-33;39!CL:0000234;1.81e-33;39!CL:0000576;3.40e-25;48!CL:0000766;1.90e-21;69!CL:0000097;1.26e-11;5!CL:0000763;1.61e-11;100!CL:0000738;1.52e-07;136|ontology_enrichment_celltype_v019_2=CL:0000557,8.74e-48,67;CL:0000473,2.42e-46,48;CL:0000234,2.42e-46,48;CL:0000839,2.38e-45,66;CL:0000766,7.06e-44,72;CL:0000860,9.21e-42,42;CL:0002057,9.21e-42,42;CL:0002194,1.96e-38,59;CL:0000576,1.96e-38,59;CL:0000040,1.96e-38,59;CL:0000559,1.96e-38,59;CL:0002009,6.08e-37,61;CL:0000763,2.05e-28,108;CL:0000049,2.05e-28,108;CL:0002031,1.86e-24,120;CL:0000738,3.96e-22,136;CL:0002087,4.61e-19,115;CL:0002032,1.17e-18,161;CL:0000837,1.17e-18,161;CL:0000037,1.69e-17,168;CL:0000988,3.79e-16,177;CL:0000097,1.46e-11,5;CL:0002028,1.46e-11,5|ontology_enrichment_development_v019=CL:0002057;1.60e-32;42!CL:0000049;4.77e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.40e-25!80;UBERON:0001474!6.01e-24!86;UBERON:0002390!1.46e-21!102;UBERON:0003061!1.46e-21!102;UBERON:0007023!1.18e-19!115;UBERON:0004765!2.95e-19!101;UBERON:0001434!2.95e-19!101;UBERON:0002193!9.46e-19!112;UBERON:0005743!2.96e-18!86;UBERON:0002405!3.77e-18!115;UBERON:0001017!4.51e-17!82;UBERON:0001049!9.37e-17!57;UBERON:0005068!9.37e-17!57;UBERON:0006241!9.37e-17!57;UBERON:0007135!9.37e-17!57;UBERON:0000955!1.04e-15!69;UBERON:0006238!1.04e-15!69;UBERON:0002616!1.15e-15!59;UBERON:0000073!3.61e-15!94;UBERON:0001016!3.61e-15!94;UBERON:0003075!1.23e-14!86;UBERON:0007284!1.23e-14!86;UBERON:0000062!1.72e-14!511;UBERON:0002346!2.10e-14!90;UBERON:0003080!9.86e-13!42;UBERON:0001893!2.87e-12!34;UBERON:0002020!4.49e-12!34;UBERON:0003528!4.49e-12!34;UBERON:0002780!4.79e-12!41;UBERON:0001890!4.79e-12!41;UBERON:0006240!4.79e-12!41;UBERON:0002791!9.78e-12!33;UBERON:0001869!5.16e-11!32;UBERON:0001950!6.85e-11!20;UBERON:0003056!8.45e-11!61;UBERON:0002619!1.05e-10!22;UBERON:0000956!1.37e-09!25;UBERON:0000203!1.37e-09!25;UBERON:0000153!1.71e-08!129;UBERON:0007811!1.71e-08!129;UBERON:0000033!5.09e-08!123;UBERON:0000468!3.41e-07!659;UBERON:0000479!8.12e-07!787|ontology_enrichment_uberon_v019=UBERON:0001897;1.29e-07;2!UBERON:0010225;1.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.86e-41,76;UBERON:0001474,1.64e-37,82;UBERON:0002405,3.64e-34,93;UBERON:0004765,2.01e-33,90;UBERON:0002390,5.63e-32,98;UBERON:0003061,5.63e-32,98;UBERON:0001434,3.15e-29,100;UBERON:0002193,3.33e-28,108;UBERON:0003081,7.43e-15,203;UBERON:0002204,4.18e-14,167;UBERON:0000926,7.89e-09,315;UBERON:0004120,7.89e-09,315;UBERON:0006603,7.89e-09,315;UBERON:0001897,2.03e-07,2;UBERON:0010225,2.03e-07,2;UBERON:0002050,7.23e-07,564|phase1_expression=0,0.214100523890983,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0.767658796194425,3.2511385896376,0,0,0,0,0,0.293600439334847,0.553995408531877,2.20598892217156,1.30206522429511,0.671746422719773,1.6194683300949,0.77272670290256,1.30858414901608,2.26725566213286,2.42584061187816,1.39457422143411,0,1.23882548358041,2.58923153089935,0.768482119587302,0.945928919554341,1.03423704220986,1.93645405075148,1.35426486594342,1.69418105588344,1.36453075028923,0.224723484445085,1.83650335422542,0.962787081228281,1.91801137739712,1.64925650093358,1.39624560335142,1.27867425159808,1.7412554317715,2.8369261234557,0.622822248995575,1.25624332628372,1.5644487552606,0.217188844705117,1.81619850790011,0.368277635987565,0.949387162322653,0.633765858935825,0.850417199860174,2.30624510059213,0.336985893439485,0.150176892841506,0.16072558669708,0.285012743741249,0.79566670879636,1.46131323011707,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0.795285947051099,0.973269740605272,0,0,0.175669571386252,0.982343066232845,0,0,0,0.174129737299267,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |||
|TSSclassifier=W | |||
|UniProt=O60861,F5H2K0 | |||
|association_with_transcript=-288bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end | |||
|coexpression_cluster_id=C1427 | |||
|description=CAGE_peak_23_at_GAS7_5end | |||
|id=chr17:10102156..10102163,- | |||
|ontology_enrichment_celltype=CL:0000557!8.99e-31!71;CL:0000839!7.31e-30!70;CL:0000766!7.87e-30!76;CL:0002057!1.22e-28!42;CL:0002194!3.73e-27!63;CL:0000576!3.73e-27!63;CL:0000040!3.73e-27!63;CL:0000559!3.73e-27!63;CL:0002009!1.15e-25!65;CL:0000860!1.55e-25!45;CL:0000763!5.64e-16!112;CL:0000049!5.64e-16!112;CL:0002031!1.90e-14!124;CL:0000738!4.88e-14!140;CL:0002087!1.33e-13!119;CL:0000037!1.16e-09!172;CL:0000566!1.16e-09!172;CL:0002032!3.26e-09!165;CL:0000837!3.26e-09!165;CL:0000988!2.29e-08!182;CL:0002393!1.74e-07!9;CL:0002397!1.74e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.26e-34;33!CL:0002057;4.26e-34;33!CL:0000473;1.81e-33;39!CL:0000234;1.81e-33;39!CL:0000576;3.40e-25;48!CL:0000766;1.90e-21;69!CL:0000097;1.26e-11;5!CL:0000763;1.61e-11;100!CL:0000738;1.52e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.74e-48,67;CL:0000473,2.42e-46,48;CL:0000234,2.42e-46,48;CL:0000839,2.38e-45,66;CL:0000766,7.06e-44,72;CL:0000860,9.21e-42,42;CL:0002057,9.21e-42,42;CL:0002194,1.96e-38,59;CL:0000576,1.96e-38,59;CL:0000040,1.96e-38,59;CL:0000559,1.96e-38,59;CL:0002009,6.08e-37,61;CL:0000763,2.05e-28,108;CL:0000049,2.05e-28,108;CL:0002031,1.86e-24,120;CL:0000738,3.96e-22,136;CL:0002087,4.61e-19,115;CL:0002032,1.17e-18,161;CL:0000837,1.17e-18,161;CL:0000037,1.69e-17,168;CL:0000988,3.79e-16,177;CL:0000097,1.46e-11,5;CL:0002028,1.46e-11,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-32;42!CL:0000049;4.77e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.40e-25!80;UBERON:0001474!6.01e-24!86;UBERON:0002390!1.46e-21!102;UBERON:0003061!1.46e-21!102;UBERON:0007023!1.18e-19!115;UBERON:0004765!2.95e-19!101;UBERON:0001434!2.95e-19!101;UBERON:0002193!9.46e-19!112;UBERON:0005743!2.96e-18!86;UBERON:0002405!3.77e-18!115;UBERON:0001017!4.51e-17!82;UBERON:0001049!9.37e-17!57;UBERON:0005068!9.37e-17!57;UBERON:0006241!9.37e-17!57;UBERON:0007135!9.37e-17!57;UBERON:0000955!1.04e-15!69;UBERON:0006238!1.04e-15!69;UBERON:0002616!1.15e-15!59;UBERON:0000073!3.61e-15!94;UBERON:0001016!3.61e-15!94;UBERON:0003075!1.23e-14!86;UBERON:0007284!1.23e-14!86;UBERON:0000062!1.72e-14!511;UBERON:0002346!2.10e-14!90;UBERON:0003080!9.86e-13!42;UBERON:0001893!2.87e-12!34;UBERON:0002020!4.49e-12!34;UBERON:0003528!4.49e-12!34;UBERON:0002780!4.79e-12!41;UBERON:0001890!4.79e-12!41;UBERON:0006240!4.79e-12!41;UBERON:0002791!9.78e-12!33;UBERON:0001869!5.16e-11!32;UBERON:0001950!6.85e-11!20;UBERON:0003056!8.45e-11!61;UBERON:0002619!1.05e-10!22;UBERON:0000956!1.37e-09!25;UBERON:0000203!1.37e-09!25;UBERON:0000153!1.71e-08!129;UBERON:0007811!1.71e-08!129;UBERON:0000033!5.09e-08!123;UBERON:0000468!3.41e-07!659;UBERON:0000479!8.12e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;1.29e-07;2!UBERON:0010225;1.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.86e-41,76;UBERON:0001474,1.64e-37,82;UBERON:0002405,3.64e-34,93;UBERON:0004765,2.01e-33,90;UBERON:0002390,5.63e-32,98;UBERON:0003061,5.63e-32,98;UBERON:0001434,3.15e-29,100;UBERON:0002193,3.33e-28,108;UBERON:0003081,7.43e-15,203;UBERON:0002204,4.18e-14,167;UBERON:0000926,7.89e-09,315;UBERON:0004120,7.89e-09,315;UBERON:0006603,7.89e-09,315;UBERON:0001897,2.03e-07,2;UBERON:0010225,2.03e-07,2;UBERON:0002050,7.23e-07,564 | |||
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| |||
|short_description=p23@GAS7 | |||
}} |
Revision as of 12:11, 11 September 2013
Short description: | p23@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_GAS7_5end |
Coexpression cluster: | C1427_Mast_Monocytederived_granulocyte_CD14_testicular_Macrophage_acute |
Association with transcript: | -288bp_to_ENST00000323816, ENST00000540214, NM_201433, uc002gmg.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | O60861F5H2K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.74e-48 | 67 |
defensive cell | 2.42e-46 | 48 |
phagocyte | 2.42e-46 | 48 |
myeloid lineage restricted progenitor cell | 2.38e-45 | 66 |
myeloid leukocyte | 7.06e-44 | 72 |
classical monocyte | 9.21e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.21e-42 | 42 |
monopoietic cell | 1.96e-38 | 59 |
monocyte | 1.96e-38 | 59 |
monoblast | 1.96e-38 | 59 |
promonocyte | 1.96e-38 | 59 |
macrophage dendritic cell progenitor | 6.08e-37 | 61 |
myeloid cell | 2.05e-28 | 108 |
common myeloid progenitor | 2.05e-28 | 108 |
hematopoietic lineage restricted progenitor cell | 1.86e-24 | 120 |
leukocyte | 3.96e-22 | 136 |
nongranular leukocyte | 4.61e-19 | 115 |
hematopoietic oligopotent progenitor cell | 1.17e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-18 | 161 |
hematopoietic stem cell | 1.69e-17 | 168 |
hematopoietic cell | 3.79e-16 | 177 |
mast cell | 1.46e-11 | 5 |
basophil mast progenitor cell | 1.46e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.86e-41 | 76 |
bone element | 1.64e-37 | 82 |
immune system | 3.64e-34 | 93 |
skeletal element | 2.01e-33 | 90 |
hematopoietic system | 5.63e-32 | 98 |
blood island | 5.63e-32 | 98 |
skeletal system | 3.15e-29 | 100 |
hemolymphoid system | 3.33e-28 | 108 |
lateral plate mesoderm | 7.43e-15 | 203 |
musculoskeletal system | 4.18e-14 | 167 |
mesoderm | 7.89e-09 | 315 |
mesoderm-derived structure | 7.89e-09 | 315 |
presumptive mesoderm | 7.89e-09 | 315 |
dorsal plus ventral thalamus | 2.03e-07 | 2 |
thalamic complex | 2.03e-07 | 2 |
embryonic structure | 7.23e-07 | 564 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.