FFCP PHASE1:Hg19::chr16:7353919..7353933,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:7353919..7353933,+|id=chr16:7353919..7353933,+|ontology_enrichment_celltype=CL:0000242!4.65e-09!2|ontology_enrichment_celltype_v019=CL:0000123;2.01e-34;2!CL:0000242;2.01e-34;2!CL:0000312;2.04e-14;5!CL:0000240;3.54e-12;6!CL:0000311;3.54e-12;6!CL:0000079;3.54e-12;6!CL:0000237;3.54e-12;6!CL:0000362;2.01e-08;9|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-34,2;CL:0000312,1.84e-14,5;CL:0000240,3.26e-12,6;CL:0000311,3.26e-12,6;CL:0000079,3.26e-12,6;CL:0000237,3.26e-12,6;CL:0000036,3.26e-12,6;CL:0000357,3.26e-12,6;CL:0000114,3.26e-12,6;CL:0000362,1.90e-08,9|ontology_enrichment_development_v019=CL:0000357;3.54e-12;6!CL:0000114;3.54e-12;6!UBERON:0006241;9.64e-07;3!UBERON:0003057;9.64e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;1.53e-10;7!DOID:3904;1.53e-10;7!DOID:154;9.07e-10;2!DOID:4236;9.07e-10;2!DOID:3905;2.12e-08;9|ontology_enrichment_disease_v019_2=DOID:5409,9.51e-18,4;DOID:1325,1.46e-10,7;DOID:3904,1.46e-10,7;DOID:154,9.46e-10,2;DOID:4236,9.46e-10,2;DOID:3905,2.05e-08,9;DOID:0050687,7.27e-07,143|ontology_enrichment_uberon=UBERON:0001893!8.00e-53!34;UBERON:0001049!4.01e-51!57;UBERON:0005068!4.01e-51!57;UBERON:0006241!4.01e-51!57;UBERON:0007135!4.01e-51!57;UBERON:0002780!5.76e-51!41;UBERON:0001890!5.76e-51!41;UBERON:0006240!5.76e-51!41;UBERON:0002791!6.67e-50!33;UBERON:0003080!1.27e-49!42;UBERON:0001869!2.90e-47!32;UBERON:0002619!1.52e-46!22;UBERON:0002020!4.85e-44!34;UBERON:0003528!4.85e-44!34;UBERON:0002616!2.04e-42!59;UBERON:0005743!4.77e-41!86;UBERON:0001017!1.19e-40!82;UBERON:0000956!1.23e-40!25;UBERON:0000203!1.23e-40!25;UBERON:0000955!2.18e-40!69;UBERON:0006238!2.18e-40!69;UBERON:0001950!3.70e-40!20;UBERON:0000073!5.71e-39!94;UBERON:0001016!5.71e-39!94;UBERON:0003075!2.56e-36!86;UBERON:0007284!2.56e-36!86;UBERON:0003056!3.58e-35!61;UBERON:0002346!2.35e-34!90;UBERON:0007023!5.52e-33!115;UBERON:0000033!1.94e-24!123;UBERON:0000153!6.19e-23!129;UBERON:0007811!6.19e-23!129;UBERON:0004121!2.07e-22!169;UBERON:0000924!1.09e-21!173;UBERON:0006601!1.09e-21!173;UBERON:0002021!1.69e-18!5;UBERON:0000200!1.01e-14!6;UBERON:0001872!4.42e-12!5;UBERON:0000025!7.68e-12!194;UBERON:0000349!1.04e-11!5;UBERON:0002771!3.60e-11!3;UBERON:0000483!1.25e-10!309;UBERON:0001871!1.58e-10!7;UBERON:0000119!1.95e-10!312;UBERON:0000475!1.47e-09!365;UBERON:0004111!1.50e-09!241;UBERON:0002420!2.47e-09!9;UBERON:0007245!2.47e-09!9;UBERON:0010009!2.47e-09!9;UBERON:0010011!2.47e-09!9;UBERON:0000454!2.47e-09!9;UBERON:0000369!1.41e-08!4;UBERON:0002435!1.41e-08!4;UBERON:0000204!1.41e-08!4;UBERON:0010082!1.41e-08!4;UBERON:0001954!2.09e-08!2;UBERON:0003022!2.09e-08!2;UBERON:0002421!2.09e-08!2;UBERON:0002600!2.09e-08!2;UBERON:0009663!4.01e-08!7;UBERON:0000064!4.67e-08!219;UBERON:0000477!1.77e-07!286|ontology_enrichment_uberon_v019=UBERON:0001954;1.17e-09;2!UBERON:0003022;1.17e-09;2!UBERON:0002421;1.17e-09;2!UBERON:0002600;1.17e-09;2!UBERON:0002240;9.64e-07;3!UBERON:0005174;9.64e-07;3!UBERON:0001137;9.64e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.33e-09,2;UBERON:0003022,1.33e-09,2;UBERON:0002421,1.33e-09,2;UBERON:0002600,1.33e-09,2;UBERON:0002240,9.12e-07,3;UBERON:0005174,9.12e-07,3;UBERON:0001137,9.12e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870036464629098,0,0,0.275673144969061,0,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,2.41320361269025,0,6.07687482266523,0,0.482385754501632,0,0,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:7353919..7353933,+ | |||
|id=chr16:7353919..7353933,+ | |||
|ontology_enrichment_celltype=CL:0000242!4.65e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.01e-34;2!CL:0000242;2.01e-34;2!CL:0000312;2.04e-14;5!CL:0000240;3.54e-12;6!CL:0000311;3.54e-12;6!CL:0000079;3.54e-12;6!CL:0000237;3.54e-12;6!CL:0000362;2.01e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-34,2;CL:0000312,1.84e-14,5;CL:0000240,3.26e-12,6;CL:0000311,3.26e-12,6;CL:0000079,3.26e-12,6;CL:0000237,3.26e-12,6;CL:0000036,3.26e-12,6;CL:0000357,3.26e-12,6;CL:0000114,3.26e-12,6;CL:0000362,1.90e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.54e-12;6!CL:0000114;3.54e-12;6!UBERON:0006241;9.64e-07;3!UBERON:0003057;9.64e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;1.53e-10;7!DOID:3904;1.53e-10;7!DOID:154;9.07e-10;2!DOID:4236;9.07e-10;2!DOID:3905;2.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,9.51e-18,4;DOID:1325,1.46e-10,7;DOID:3904,1.46e-10,7;DOID:154,9.46e-10,2;DOID:4236,9.46e-10,2;DOID:3905,2.05e-08,9;DOID:0050687,7.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001893!8.00e-53!34;UBERON:0001049!4.01e-51!57;UBERON:0005068!4.01e-51!57;UBERON:0006241!4.01e-51!57;UBERON:0007135!4.01e-51!57;UBERON:0002780!5.76e-51!41;UBERON:0001890!5.76e-51!41;UBERON:0006240!5.76e-51!41;UBERON:0002791!6.67e-50!33;UBERON:0003080!1.27e-49!42;UBERON:0001869!2.90e-47!32;UBERON:0002619!1.52e-46!22;UBERON:0002020!4.85e-44!34;UBERON:0003528!4.85e-44!34;UBERON:0002616!2.04e-42!59;UBERON:0005743!4.77e-41!86;UBERON:0001017!1.19e-40!82;UBERON:0000956!1.23e-40!25;UBERON:0000203!1.23e-40!25;UBERON:0000955!2.18e-40!69;UBERON:0006238!2.18e-40!69;UBERON:0001950!3.70e-40!20;UBERON:0000073!5.71e-39!94;UBERON:0001016!5.71e-39!94;UBERON:0003075!2.56e-36!86;UBERON:0007284!2.56e-36!86;UBERON:0003056!3.58e-35!61;UBERON:0002346!2.35e-34!90;UBERON:0007023!5.52e-33!115;UBERON:0000033!1.94e-24!123;UBERON:0000153!6.19e-23!129;UBERON:0007811!6.19e-23!129;UBERON:0004121!2.07e-22!169;UBERON:0000924!1.09e-21!173;UBERON:0006601!1.09e-21!173;UBERON:0002021!1.69e-18!5;UBERON:0000200!1.01e-14!6;UBERON:0001872!4.42e-12!5;UBERON:0000025!7.68e-12!194;UBERON:0000349!1.04e-11!5;UBERON:0002771!3.60e-11!3;UBERON:0000483!1.25e-10!309;UBERON:0001871!1.58e-10!7;UBERON:0000119!1.95e-10!312;UBERON:0000475!1.47e-09!365;UBERON:0004111!1.50e-09!241;UBERON:0002420!2.47e-09!9;UBERON:0007245!2.47e-09!9;UBERON:0010009!2.47e-09!9;UBERON:0010011!2.47e-09!9;UBERON:0000454!2.47e-09!9;UBERON:0000369!1.41e-08!4;UBERON:0002435!1.41e-08!4;UBERON:0000204!1.41e-08!4;UBERON:0010082!1.41e-08!4;UBERON:0001954!2.09e-08!2;UBERON:0003022!2.09e-08!2;UBERON:0002421!2.09e-08!2;UBERON:0002600!2.09e-08!2;UBERON:0009663!4.01e-08!7;UBERON:0000064!4.67e-08!219;UBERON:0000477!1.77e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.17e-09;2!UBERON:0003022;1.17e-09;2!UBERON:0002421;1.17e-09;2!UBERON:0002600;1.17e-09;2!UBERON:0002240;9.64e-07;3!UBERON:0005174;9.64e-07;3!UBERON:0001137;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.33e-09,2;UBERON:0003022,1.33e-09,2;UBERON:0002421,1.33e-09,2;UBERON:0002600,1.33e-09,2;UBERON:0002240,9.12e-07,3;UBERON:0005174,9.12e-07,3;UBERON:0001137,9.12e-07,3 | |||
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|short_description=p@chr16:7353919..7353933,+ | |||
}} |
Revision as of 11:30, 11 September 2013
Short description: | p@chr16:7353919..7353933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:7353919..7353933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-34 | 2 |
keratinocyte | 1.84e-14 | 5 |
stratified squamous epithelial cell | 3.26e-12 | 6 |
keratin accumulating cell | 3.26e-12 | 6 |
stratified epithelial cell | 3.26e-12 | 6 |
keratinizing barrier epithelial cell | 3.26e-12 | 6 |
epithelial fate stem cell | 3.26e-12 | 6 |
stratified epithelial stem cell | 3.26e-12 | 6 |
surface ectodermal cell | 3.26e-12 | 6 |
epidermal cell | 1.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.33e-09 | 2 |
lobe parts of cerebral cortex | 1.33e-09 | 2 |
hippocampal formation | 1.33e-09 | 2 |
limbic lobe | 1.33e-09 | 2 |
spinal cord | 9.12e-07 | 3 |
dorsal region element | 9.12e-07 | 3 |
dorsum | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 9.51e-18 | 4 |
bronchus cancer | 1.46e-10 | 7 |
bronchogenic carcinoma | 1.46e-10 | 7 |
mixed cell type cancer | 9.46e-10 | 2 |
carcinosarcoma | 9.46e-10 | 2 |
lung carcinoma | 2.05e-08 | 9 |
cell type cancer | 7.27e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.