FFCP PHASE1:Hg19::chr16:56303320..56303326,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:56303320..56303326,-|id=chr16:56303320..56303326,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000235;7.60e-42;6!CL:0000349;1.34e-08;19!CL:0002569;1.47e-07;6|ontology_enrichment_celltype_v019_2=CL:0000235,3.44e-42,6;CL:0000349,2.01e-08,19;CL:0002194,1.35e-07,59;CL:0000576,1.35e-07,59;CL:0000040,1.35e-07,59;CL:0000559,1.35e-07,59;CL:0002569,2.11e-07,6;CL:0002009,2.51e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.04e-08!448;UBERON:0004120!3.04e-08!448;UBERON:0006603!3.04e-08!448;UBERON:0002405!1.66e-07!115|ontology_enrichment_uberon_v019=UBERON:0000029;2.67e-11;1!UBERON:0002171;2.67e-11;1!UBERON:0006518;2.67e-11;1!UBERON:0008949;2.67e-11;1!UBERON:0000101;2.67e-11;1!UBERON:0002167;2.67e-11;1!UBERON:0003422;1.47e-07;6!UBERON:0000478;7.73e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.18e-11,1;UBERON:0002171,2.68e-11,1;UBERON:0006518,2.68e-11,1;UBERON:0008949,2.68e-11,1;UBERON:0000101,2.68e-11,1;UBERON:0002167,2.68e-11,1;UBERON:0002405,1.55e-07,93;UBERON:0002371,1.83e-07,76;UBERON:0003422,2.11e-07,6;UBERON:0001474,7.46e-07,82|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.90361775633475,0,0,0.142169232487422,0,0,0,0,0.671746422719773,0.971680998056939,4.37878464978117,0,0,0,0.929716147622738,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0.918251677112708,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0.22465726229299,0.300353785683013,0.32145117339416,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.174129737299267,1.19662164466979,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.302714855289863,0,0,0,0,0,0,0,0.561803226808994,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0.438977620880838,0.612975591598039,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.252320850875628,0,1.56449532329816,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0.217879444092406,0,0,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.368965315629341,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,1.96973604869918,0.936017060556951,1.48631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0.126995788584338,0,1.17217447210047,0,0.411309970813294,0,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,0,0,1.04007436911366,0.257207374262142,1.41849132023278,0,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0,0,0,1.2162378064119,2.00902836572851,4.21667878966063,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,1.21251028578504,0,0,0.248107807818777,0,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0.114814448164607,0,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0.460511024178389,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.823611089208164,0,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0.659215496907038,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0.332423363800313,0,0,0.503464760927528,0.189753732724185,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.561111741760736,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0.815985741090574,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26961417541674,0.688992370603241,0.0846733320657845,0,0,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0.157363764404994,0,0.35857467866569,0.191915197319445,0.714695326373367,0,0,0,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0,0.293104467356165,1.32506888912221,0,0,0.342173675768659,0,0.213574825135389,0,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.467426619694449,0,0.378806010550178,0.50313580350515,0,0.457680136793847,0,0.310874401165561,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.450772826991655,0,0.406870733204662,0.181848659202559,0,0.928067519756987,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0.655219697692825,0.491545817507439,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0.203909198930495,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.375935671919414,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0|short_description=p@chr16:56303320..56303326,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:56303320..56303326,- | |||
|id=chr16:56303320..56303326,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.60e-42;6!CL:0000349;1.34e-08;19!CL:0002569;1.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.44e-42,6;CL:0000349,2.01e-08,19;CL:0002194,1.35e-07,59;CL:0000576,1.35e-07,59;CL:0000040,1.35e-07,59;CL:0000559,1.35e-07,59;CL:0002569,2.11e-07,6;CL:0002009,2.51e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.04e-08!448;UBERON:0004120!3.04e-08!448;UBERON:0006603!3.04e-08!448;UBERON:0002405!1.66e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.67e-11;1!UBERON:0002171;2.67e-11;1!UBERON:0006518;2.67e-11;1!UBERON:0008949;2.67e-11;1!UBERON:0000101;2.67e-11;1!UBERON:0002167;2.67e-11;1!UBERON:0003422;1.47e-07;6!UBERON:0000478;7.73e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.18e-11,1;UBERON:0002171,2.68e-11,1;UBERON:0006518,2.68e-11,1;UBERON:0008949,2.68e-11,1;UBERON:0000101,2.68e-11,1;UBERON:0002167,2.68e-11,1;UBERON:0002405,1.55e-07,93;UBERON:0002371,1.83e-07,76;UBERON:0003422,2.11e-07,6;UBERON:0001474,7.46e-07,82 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.90361775633475,0,0,0.142169232487422,0,0,0,0,0.671746422719773,0.971680998056939,4.37878464978117,0,0,0,0.929716147622738,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0.918251677112708,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0.22465726229299,0.300353785683013,0.32145117339416,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.174129737299267,1.19662164466979,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.302714855289863,0,0,0,0,0,0,0,0.561803226808994,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0.438977620880838,0.612975591598039,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.252320850875628,0,1.56449532329816,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0.217879444092406,0,0,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.368965315629341,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,1.96973604869918,0.936017060556951,1.48631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0.126995788584338,0,1.17217447210047,0,0.411309970813294,0,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,0,0,1.04007436911366,0.257207374262142,1.41849132023278,0,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0,0,0,1.2162378064119,2.00902836572851,4.21667878966063,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,1.21251028578504,0,0,0.248107807818777,0,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0.114814448164607,0,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0.460511024178389,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.823611089208164,0,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0.659215496907038,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0.332423363800313,0,0,0.503464760927528,0.189753732724185,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.561111741760736,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0.815985741090574,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26961417541674,0.688992370603241,0.0846733320657845,0,0,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0.157363764404994,0,0.35857467866569,0.191915197319445,0.714695326373367,0,0,0,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0,0.293104467356165,1.32506888912221,0,0,0.342173675768659,0,0.213574825135389,0,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.467426619694449,0,0.378806010550178,0.50313580350515,0,0.457680136793847,0,0.310874401165561,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.450772826991655,0,0.406870733204662,0.181848659202559,0,0.928067519756987,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0.655219697692825,0.491545817507439,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0.203909198930495,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.375935671919414,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:56303320..56303326,- | |||
}} |
Revision as of 10:47, 11 September 2013
Short description: | p@chr16:56303320..56303326, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:56303320..56303326, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.44e-42 | 6 |
extraembryonic cell | 2.01e-08 | 19 |
monopoietic cell | 1.35e-07 | 59 |
monocyte | 1.35e-07 | 59 |
monoblast | 1.35e-07 | 59 |
promonocyte | 1.35e-07 | 59 |
mesenchymal stem cell of umbilical cord | 2.11e-07 | 6 |
macrophage dendritic cell progenitor | 2.51e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.18e-11 | 1 |
lower lobe of right lung | 2.68e-11 | 1 |
right lung lobe | 2.68e-11 | 1 |
lower lobe of lung | 2.68e-11 | 1 |
lobe of lung | 2.68e-11 | 1 |
right lung | 2.68e-11 | 1 |
immune system | 1.55e-07 | 93 |
bone marrow | 1.83e-07 | 76 |
mesenchyme of umbilical cord | 2.11e-07 | 6 |
bone element | 7.46e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.