FFCP PHASE1:Hg19::chr16:53483936..53483954,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5934|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9894|TSSclassifier=S|UniProt=|association_with_transcript=-21bp_to_uc010vgw.1_5end|coexpression_cluster_id=C18|description=CAGE_peak_6_at_RBL2_5end|id=chr16:53483936..53483954,+|ontology_enrichment_celltype=CL:0000791!3.27e-26!18;CL:0000789!3.27e-26!18;CL:0002420!3.27e-26!18;CL:0002419!3.27e-26!18;CL:0000790!3.27e-26!18;CL:0000838!4.89e-25!52;CL:0000542!2.20e-24!53;CL:0000051!2.20e-24!53;CL:0000625!7.14e-22!11;CL:0000084!7.88e-20!25;CL:0000827!7.88e-20!25;CL:0002087!9.93e-13!119;CL:0000738!1.00e-10!140;CL:0002031!2.76e-09!124;CL:0000624!3.63e-08!6;CL:0000080!2.26e-07!6;CL:0000988!6.54e-07!182;CL:0000037!7.25e-07!172;CL:0000566!7.25e-07!172|ontology_enrichment_celltype_v019=CL:0000791;5.92e-51;18!CL:0000789;5.92e-51;18!CL:0002419;5.92e-51;18!CL:0000625;8.82e-47;11!CL:0000084;1.73e-40;25!CL:0000226;6.82e-13;3!CL:0000842;6.82e-13;3!CL:0000542;9.24e-13;53!CL:0000624;3.58e-11;6|ontology_enrichment_celltype_v019_2=CL:0000791,5.92e-51,18;CL:0000789,5.92e-51,18;CL:0002420,5.92e-51,18;CL:0002419,5.92e-51,18;CL:0000790,5.92e-51,18;CL:0000625,9.43e-47,11;CL:0000084,1.58e-40,25;CL:0000827,1.58e-40,25;CL:0000838,2.23e-22,52;CL:0000542,7.11e-22,53;CL:0000051,7.11e-22,53;CL:0000226,8.05e-13,3;CL:0000842,8.05e-13,3;CL:0000624,3.44e-11,6;CL:0002087,4.08e-11,115;CL:0000738,1.10e-08,136;CL:0002031,2.86e-07,120|ontology_enrichment_development_v019=CL:0000790;5.92e-51;18!CL:0000051;9.24e-13;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.39e-22!15;UBERON:0000179!2.39e-22!15;UBERON:0000463!2.39e-22!15|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-37;15!UBERON:0000179;4.56e-37;15!UBERON:0000463;4.56e-37;15!UBERON:0002390;2.67e-15;32!UBERON:0002193;1.17e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.72e-37,15;UBERON:0000179,4.72e-37,15;UBERON:0000463,4.72e-37,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.328402357799783,0.472264687882075,0,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,0.284338464974843,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,4.32761494250433,0.786021525498329,1.64481199199607,10.1983762188314,1.30368906653436,3.78758244587787,0,4.56782873229212,0,0,0.270803863765016,3.45846563259323,3.77172107923647,10.8529017038426,9.67225062250469,33.9069610310011,22.2429844743091,19.7980212786388,13.589618094647,22.5485591968157,6.89796888483458,5.49803912772208,9.1087089127021,25.4852331459277,27.3455050619696,26.6126572445545,6.77588035849977,7.55121005811069,34.9806034346568,26.5190522289299,20.5281999230262,5.84659555351724,2.13952156626806,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,0.862510299438069,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,1.07857100409308,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.56702848308952,2.29391162142713,3.41788312304498,5.00286728461357,4.52498500394814,2.59389324477087,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,2.21027132424918,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.992332043623902,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.375935671919414,0.193373663920732,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0.904244737704086,0.496597714366863,0,0,0,0,0,0.606168477131288,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,1.20764276154616,0.320568492303233|short_description=p6@RBL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_uc010vgw.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_RBL2_5end | |||
|id=chr16:53483936..53483954,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.27e-26!18;CL:0000789!3.27e-26!18;CL:0002420!3.27e-26!18;CL:0002419!3.27e-26!18;CL:0000790!3.27e-26!18;CL:0000838!4.89e-25!52;CL:0000542!2.20e-24!53;CL:0000051!2.20e-24!53;CL:0000625!7.14e-22!11;CL:0000084!7.88e-20!25;CL:0000827!7.88e-20!25;CL:0002087!9.93e-13!119;CL:0000738!1.00e-10!140;CL:0002031!2.76e-09!124;CL:0000624!3.63e-08!6;CL:0000080!2.26e-07!6;CL:0000988!6.54e-07!182;CL:0000037!7.25e-07!172;CL:0000566!7.25e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.92e-51;18!CL:0000789;5.92e-51;18!CL:0002419;5.92e-51;18!CL:0000625;8.82e-47;11!CL:0000084;1.73e-40;25!CL:0000226;6.82e-13;3!CL:0000842;6.82e-13;3!CL:0000542;9.24e-13;53!CL:0000624;3.58e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.92e-51,18;CL:0000789,5.92e-51,18;CL:0002420,5.92e-51,18;CL:0002419,5.92e-51,18;CL:0000790,5.92e-51,18;CL:0000625,9.43e-47,11;CL:0000084,1.58e-40,25;CL:0000827,1.58e-40,25;CL:0000838,2.23e-22,52;CL:0000542,7.11e-22,53;CL:0000051,7.11e-22,53;CL:0000226,8.05e-13,3;CL:0000842,8.05e-13,3;CL:0000624,3.44e-11,6;CL:0002087,4.08e-11,115;CL:0000738,1.10e-08,136;CL:0002031,2.86e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;5.92e-51;18!CL:0000051;9.24e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.39e-22!15;UBERON:0000179!2.39e-22!15;UBERON:0000463!2.39e-22!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-37;15!UBERON:0000179;4.56e-37;15!UBERON:0000463;4.56e-37;15!UBERON:0002390;2.67e-15;32!UBERON:0002193;1.17e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.72e-37,15;UBERON:0000179,4.72e-37,15;UBERON:0000463,4.72e-37,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.328402357799783,0.472264687882075,0,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,0.284338464974843,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,4.32761494250433,0.786021525498329,1.64481199199607,10.1983762188314,1.30368906653436,3.78758244587787,0,4.56782873229212,0,0,0.270803863765016,3.45846563259323,3.77172107923647,10.8529017038426,9.67225062250469,33.9069610310011,22.2429844743091,19.7980212786388,13.589618094647,22.5485591968157,6.89796888483458,5.49803912772208,9.1087089127021,25.4852331459277,27.3455050619696,26.6126572445545,6.77588035849977,7.55121005811069,34.9806034346568,26.5190522289299,20.5281999230262,5.84659555351724,2.13952156626806,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,0.862510299438069,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,1.07857100409308,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.56702848308952,2.29391162142713,3.41788312304498,5.00286728461357,4.52498500394814,2.59389324477087,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,2.21027132424918,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.992332043623902,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.375935671919414,0.193373663920732,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0.904244737704086,0.496597714366863,0,0,0,0,0,0.606168477131288,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,1.20764276154616,0.320568492303233 | |||
|short_description=p6@RBL2 | |||
}} |
Revision as of 10:42, 11 September 2013
Short description: | p6@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -21bp_to_uc010vgw.1_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.92e-51 | 18 |
alpha-beta T cell | 5.92e-51 | 18 |
immature T cell | 5.92e-51 | 18 |
mature T cell | 5.92e-51 | 18 |
immature alpha-beta T cell | 5.92e-51 | 18 |
CD8-positive, alpha-beta T cell | 9.43e-47 | 11 |
T cell | 1.58e-40 | 25 |
pro-T cell | 1.58e-40 | 25 |
lymphoid lineage restricted progenitor cell | 2.23e-22 | 52 |
lymphocyte | 7.11e-22 | 53 |
common lymphoid progenitor | 7.11e-22 | 53 |
single nucleate cell | 8.05e-13 | 3 |
mononuclear cell | 8.05e-13 | 3 |
CD4-positive, alpha-beta T cell | 3.44e-11 | 6 |
nongranular leukocyte | 4.08e-11 | 115 |
leukocyte | 1.10e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.86e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 4.72e-37 | 15 |
haemolymphatic fluid | 4.72e-37 | 15 |
organism substance | 4.72e-37 | 15 |
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