FFCP PHASE1:Hg19::chr16:447209..447225,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7852 | |||
|TSSclassifier=S | |||
|UniProt=O00746,Q4TT34 | |||
|association_with_transcript=0bp_to_ENST00000219479,ENST00000382940_5end | |||
|coexpression_cluster_id=C2373 | |||
|description=CAGE_peak_2_at_NME4_5end | |||
|id=chr16:447209..447225,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.96e-29!180;CL:0002321!3.03e-28!248;CL:0000220!7.35e-28!246;CL:0000222!1.25e-22!119;CL:0000144!8.99e-21!625;CL:0000183!2.41e-20!59;CL:0002371!5.57e-18!591;CL:0000187!6.99e-18!54;CL:0000680!1.77e-17!57;CL:0000056!1.77e-17!57;CL:0000355!1.77e-17!57;CL:0000393!4.35e-17!60;CL:0000211!4.35e-17!60;CL:0000192!9.78e-17!42;CL:0000514!9.78e-17!42;CL:0000012!1.35e-16!682;CL:0000548!1.61e-16!679;CL:0000004!1.61e-16!679;CL:0000255!1.61e-16!679;CL:0000359!4.82e-13!32;CL:0000057!3.39e-08!75;CL:0000221!3.74e-08!71;CL:0000325!5.97e-08!39;CL:0000115!1.57e-07!35;CL:0002078!3.46e-07!44;CL:0000213!4.00e-07!57;CL:0000215!4.00e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.38e-12;32!CL:0000192;4.33e-12;43!CL:0000187;2.07e-10;55!CL:0000393;6.19e-09;61!CL:0000211;6.19e-09;61 | |||
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| |||
|short_description=p2@NME4 | |||
}} |
Revision as of 10:25, 11 September 2013
Short description: | p2@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NME4_5end |
Coexpression cluster: | C2373_Mesenchymal_Renal_leiomyoblastoma_Hepatic_Pericytes_Fibroblast_Smooth |
Association with transcript: | 0bp_to_ENST00000219479, ENST00000382940_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | O00746Q4TT34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.45e-29 | 250 |
mesodermal cell | 5.69e-23 | 121 |
muscle cell | 7.80e-18 | 55 |
muscle precursor cell | 1.92e-17 | 58 |
myoblast | 1.92e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-17 | 58 |
electrically responsive cell | 4.58e-17 | 61 |
electrically active cell | 4.58e-17 | 61 |
smooth muscle cell | 1.20e-16 | 43 |
smooth muscle myoblast | 1.20e-16 | 43 |
vascular associated smooth muscle cell | 4.76e-13 | 32 |
fibroblast | 2.09e-08 | 76 |
ectodermal cell | 2.11e-08 | 72 |
endothelial cell | 8.48e-08 | 36 |
meso-epithelial cell | 1.93e-07 | 45 |
lining cell | 2.30e-07 | 58 |
barrier cell | 2.30e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.