FFCP PHASE1:Hg19::chr16:30102828..30102840,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6911|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11605|TSSclassifier=S|UniProt=O95947|association_with_transcript=-258bp_to_ENST00000279386_5end|description=CAGE_peak_5_at_TBX6_5end|id=chr16:30102828..30102840,-|ontology_enrichment_celltype=CL:0002322!9.78e-12!5;CL:0002202!9.55e-09!9;CL:0002632!9.55e-09!9;CL:0000068!4.42e-08!3;CL:0000069!4.42e-08!3;CL:0000307!4.42e-08!3;CL:0000377!4.42e-08!3;CL:0000349!5.96e-08!3;CL:0002577!5.96e-08!3;CL:0002076!6.55e-07!43;CL:0002077!9.88e-07!33|ontology_enrichment_celltype_v019=CL:0000307;1.48e-18;3!CL:0002336;1.50e-14;1!CL:0002261;1.50e-14;1!CL:0002170;1.50e-14;1!CL:0000575;6.35e-08;2!CL:0002202;8.58e-07;9!CL:0002632;8.58e-07;9|ontology_enrichment_celltype_v019_2=CL:0000068,3.60e-18,3;CL:0000069,3.60e-18,3;CL:0000307,3.60e-18,3;CL:0000377,3.60e-18,3;CL:0002336,1.61e-14,1;CL:0002261,1.61e-14,1;CL:0002170,1.61e-14,1;CL:0000575,4.38e-08,2|ontology_enrichment_development_v019=CL:0000377;1.48e-18;3!UBERON:0008425;4.72e-15;1!UBERON:0009143;5.80e-15;1!UBERON:0004874;1.50e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.63e-10!169;UBERON:0000925!3.63e-10!169;UBERON:0006595!3.63e-10!169;UBERON:0005631!1.76e-09!14;UBERON:0000158!1.76e-09!14;UBERON:0007196!2.17e-09!14;UBERON:0001558!2.17e-09!14;UBERON:0004921!8.34e-09!129;UBERON:0004185!8.34e-09!129;UBERON:0003126!1.47e-08!7;UBERON:0001005!1.47e-08!7;UBERON:0000077!2.71e-08!130;UBERON:0005178!3.11e-08!34;UBERON:0002224!3.11e-08!34;UBERON:0005181!6.54e-08!35;UBERON:0001041!1.31e-07!98;UBERON:0000072!2.20e-07!46;UBERON:0001007!2.73e-07!155;UBERON:0001555!2.73e-07!155;UBERON:0007026!2.73e-07!155;UBERON:0000065!7.90e-07!53|ontology_enrichment_uberon_v019=UBERON:0003126;1.42e-17;7!UBERON:0001005;1.42e-17;7!UBERON:0002372;1.50e-14;1!UBERON:0000989;1.50e-14;1!UBERON:0008811;1.50e-14;1!UBERON:0001961;1.50e-14;1!UBERON:0001744;1.50e-14;1!UBERON:0001042;1.50e-14;1!UBERON:0001735;1.50e-14;1!UBERON:0007196;1.62e-08;15!UBERON:0001558;1.62e-08;15!UBERON:0003127;6.35e-08;2!UBERON:0006562;6.35e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.06e-17,7;UBERON:0001005,2.06e-17,7;UBERON:0002372,1.07e-14,1;UBERON:0001961,1.07e-14,1;UBERON:0001744,1.07e-14,1;UBERON:0001735,1.07e-14,1;UBERON:0000989,1.23e-14,1;UBERON:0008811,1.23e-14,1;UBERON:0006258,1.23e-14,1;UBERON:0005876,1.23e-14,1;UBERON:0004874,1.23e-14,1;UBERON:0007196,1.92e-08,15;UBERON:0001558,1.92e-08,15;UBERON:0003127,5.02e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.975789649036763,0.927708378250397,0.813357600086629,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10497186723076,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.789147245095469,0,0,0,0,0,0,5.85981999974511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0,0,0,0,0,3.4916045935831,0,0,0,0,0.0633107959558787,0,0,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0.443568258651136,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.760191006068622,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.639701945702943,0,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,1.54909721933551,1.57788851863888,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p5@TBX6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11605 | |||
|TSSclassifier=S | |||
|UniProt=O95947 | |||
|association_with_transcript=-258bp_to_ENST00000279386_5end | |||
|description=CAGE_peak_5_at_TBX6_5end | |||
|id=chr16:30102828..30102840,- | |||
|ontology_enrichment_celltype=CL:0002322!9.78e-12!5;CL:0002202!9.55e-09!9;CL:0002632!9.55e-09!9;CL:0000068!4.42e-08!3;CL:0000069!4.42e-08!3;CL:0000307!4.42e-08!3;CL:0000377!4.42e-08!3;CL:0000349!5.96e-08!3;CL:0002577!5.96e-08!3;CL:0002076!6.55e-07!43;CL:0002077!9.88e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.48e-18;3!CL:0002336;1.50e-14;1!CL:0002261;1.50e-14;1!CL:0002170;1.50e-14;1!CL:0000575;6.35e-08;2!CL:0002202;8.58e-07;9!CL:0002632;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.60e-18,3;CL:0000069,3.60e-18,3;CL:0000307,3.60e-18,3;CL:0000377,3.60e-18,3;CL:0002336,1.61e-14,1;CL:0002261,1.61e-14,1;CL:0002170,1.61e-14,1;CL:0000575,4.38e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.48e-18;3!UBERON:0008425;4.72e-15;1!UBERON:0009143;5.80e-15;1!UBERON:0004874;1.50e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.63e-10!169;UBERON:0000925!3.63e-10!169;UBERON:0006595!3.63e-10!169;UBERON:0005631!1.76e-09!14;UBERON:0000158!1.76e-09!14;UBERON:0007196!2.17e-09!14;UBERON:0001558!2.17e-09!14;UBERON:0004921!8.34e-09!129;UBERON:0004185!8.34e-09!129;UBERON:0003126!1.47e-08!7;UBERON:0001005!1.47e-08!7;UBERON:0000077!2.71e-08!130;UBERON:0005178!3.11e-08!34;UBERON:0002224!3.11e-08!34;UBERON:0005181!6.54e-08!35;UBERON:0001041!1.31e-07!98;UBERON:0000072!2.20e-07!46;UBERON:0001007!2.73e-07!155;UBERON:0001555!2.73e-07!155;UBERON:0007026!2.73e-07!155;UBERON:0000065!7.90e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;1.42e-17;7!UBERON:0001005;1.42e-17;7!UBERON:0002372;1.50e-14;1!UBERON:0000989;1.50e-14;1!UBERON:0008811;1.50e-14;1!UBERON:0001961;1.50e-14;1!UBERON:0001744;1.50e-14;1!UBERON:0001042;1.50e-14;1!UBERON:0001735;1.50e-14;1!UBERON:0007196;1.62e-08;15!UBERON:0001558;1.62e-08;15!UBERON:0003127;6.35e-08;2!UBERON:0006562;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.06e-17,7;UBERON:0001005,2.06e-17,7;UBERON:0002372,1.07e-14,1;UBERON:0001961,1.07e-14,1;UBERON:0001744,1.07e-14,1;UBERON:0001735,1.07e-14,1;UBERON:0000989,1.23e-14,1;UBERON:0008811,1.23e-14,1;UBERON:0006258,1.23e-14,1;UBERON:0005876,1.23e-14,1;UBERON:0004874,1.23e-14,1;UBERON:0007196,1.92e-08,15;UBERON:0001558,1.92e-08,15;UBERON:0003127,5.02e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.975789649036763,0.927708378250397,0.813357600086629,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10497186723076,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.789147245095469,0,0,0,0,0,0,5.85981999974511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0,0,0,0,0,3.4916045935831,0,0,0,0,0.0633107959558787,0,0,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0.443568258651136,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.760191006068622,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.639701945702943,0,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,1.54909721933551,1.57788851863888,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TBX6 | |||
}} |
Revision as of 10:05, 11 September 2013
Short description: | p5@TBX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TBX6_5end |
Coexpression cluster: | NA |
Association with transcript: | -258bp_to_ENST00000279386_5end |
EntrezGene: | TBX6 |
HGNC: | 11605 |
UniProt: | O95947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.60e-18 | 3 |
branched duct epithelial cell | 3.60e-18 | 3 |
tracheal epithelial cell | 3.60e-18 | 3 |
tracheoblast | 3.60e-18 | 3 |
buccal mucosa cell | 1.61e-14 | 1 |
endothelial cell of viscerocranial mucosa | 1.61e-14 | 1 |
keratinized cell of the oral mucosa | 1.61e-14 | 1 |
corneal epithelial cell | 4.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.06e-17 | 7 |
respiratory airway | 2.06e-17 | 7 |
tonsil | 1.07e-14 | 1 |
mucosa-associated lymphoid tissue | 1.07e-14 | 1 |
lymphoid tissue | 1.07e-14 | 1 |
tonsillar ring | 1.07e-14 | 1 |
penis | 1.23e-14 | 1 |
intromittent organ | 1.23e-14 | 1 |
lateral plate mesenchyme | 1.23e-14 | 1 |
undifferentiated genital tubercle | 1.23e-14 | 1 |
somatopleure | 1.23e-14 | 1 |
tracheobronchial tree | 1.92e-08 | 15 |
lower respiratory tract | 1.92e-08 | 15 |
open tracheal system trachea | 5.02e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.