FFCP PHASE1:Hg19::chr16:12059021..12059048,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=608|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11913|TSSclassifier=S|UniProt=Q2TQ40|association_with_transcript=-31bp_to_ENST00000396495_5end|coexpression_cluster_id=C1196|description=CAGE_peak_2_at_TNFRSF17_5end|id=chr16:12059021..12059048,+|ontology_enrichment_celltype=CL:0000945!4.90e-66!24;CL:0000826!4.90e-66!24;CL:0000236!1.71e-36!14;CL:0000542!7.80e-29!53;CL:0000051!7.80e-29!53;CL:0000838!7.21e-27!52;CL:0002087!3.13e-13!119;CL:0000738!3.24e-13!140;CL:0002031!2.71e-11!124;CL:0000784!9.14e-10!3;CL:0000037!2.47e-09!172;CL:0000566!2.47e-09!172;CL:0000988!2.04e-08!182;CL:0002032!2.28e-08!165;CL:0000837!2.28e-08!165;CL:0000785!1.85e-07!2;CL:0000955!1.85e-07!2;CL:0000818!1.85e-07!2;CL:0000954!1.85e-07!2;CL:0000816!1.85e-07!2|ontology_enrichment_celltype_v019=CL:0000945;2.33e-114;24!CL:0000236;1.52e-57;13!CL:0000542;4.81e-32;53!CL:0000784;7.61e-16;3!CL:0002087;1.05e-07;104!CL:0000946;8.49e-07;1!CL:0000786;8.49e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,2.05e-114,24;CL:0000826,2.05e-114,24;CL:0000236,9.95e-63,14;CL:0000542,1.20e-53,53;CL:0000051,1.20e-53,53;CL:0000838,4.34e-50,52;CL:0002087,1.17e-23,115;CL:0000738,7.31e-23,136;CL:0002031,1.91e-20,120;CL:0000037,1.95e-17,168;CL:0000988,2.92e-16,177;CL:0000784,8.67e-16,3;CL:0002032,2.17e-15,161;CL:0000837,2.17e-15,161;CL:0000785,8.51e-12,2;CL:0000955,8.51e-12,2;CL:0000818,8.51e-12,2;CL:0000954,8.51e-12,2;CL:0000816,8.51e-12,2;CL:0000817,3.82e-08,3;CL:0000946,8.97e-07,1;CL:0000786,8.97e-07,1;CL:0000980,8.97e-07,1|ontology_enrichment_development_v019=CL:0000051;4.81e-32;53!CL:0000954;8.28e-12;2!UBERON:0004872;2.76e-07;7|ontology_enrichment_disease=DOID:0060058!5.18e-11!10|ontology_enrichment_disease_v019=DOID:0060058;7.93e-19;10!DOID:4960;6.25e-07;1!DOID:0070004;6.25e-07;1|ontology_enrichment_disease_v019_2=DOID:0060058,8.72e-19,10;DOID:4960,6.43e-07,1;DOID:0070004,6.43e-07,1|ontology_enrichment_uberon=UBERON:0007023!1.13e-15!115;UBERON:0004177!3.38e-10!7;UBERON:0002106!8.87e-10!3;UBERON:0004854!8.87e-10!3;UBERON:0009034!8.87e-10!3;UBERON:0002095!8.87e-10!3;UBERON:0004782!8.87e-10!3;UBERON:0003281!8.87e-10!3;UBERON:0009664!8.87e-10!3;UBERON:0002296!8.87e-10!3;UBERON:0005602!8.87e-10!3;UBERON:0001179!8.87e-10!3;UBERON:0006293!8.87e-10!3;UBERON:0003408!8.37e-07!10;UBERON:0001829!8.74e-07!2|ontology_enrichment_uberon_v019=UBERON:0002106;4.32e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.72e-08,3;UBERON:0004854,4.72e-08,3;UBERON:0009034,4.72e-08,3;UBERON:0002095,4.72e-08,3;UBERON:0004782,4.72e-08,3;UBERON:0003281,4.72e-08,3;UBERON:0009664,4.72e-08,3;UBERON:0002296,4.72e-08,3;UBERON:0005602,4.72e-08,3;UBERON:0001179,4.72e-08,3;UBERON:0006293,4.72e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6214633989652,12.8076919541915,16.6866856385,0,0,0.309632246632152,0,0,0,5.34523684004081,1.42169232487422,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0796995569058,18.0225741716503,11.5636203002262,17.4959391252268,8.40831572775626,14.9435634388166,9.91567309177293,10.494591299889,2.27685187643779,2.34894875748376,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,1.19245312152671,2.28797964312051,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0,1.90585420366231,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,8.36114288065734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,11.6930565188016,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94606641907346,0.611030144933625,0,0,0,0,0,0,5.47364367646998,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,3.21758661849981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47316215268366,27.0727935700184,29.9609792017004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3994785355787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,10.3710588800201,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.218559560503957,0,0,0,0,0,0,0,2.16163011353663,0.322289439867886,11.3932917754419,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0,0.322944549180031,0.0620747142958579,0,0.0636471582781649,0,0,0,4.17582728690443,0.645499848534087,0,0,0,0,0,0,0,0,0,1.00636896795513,4.16739039994203|short_description=p2@TNFRSF17}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=608 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11913 | |||
|TSSclassifier=S | |||
|UniProt=Q2TQ40 | |||
|association_with_transcript=-31bp_to_ENST00000396495_5end | |||
|coexpression_cluster_id=C1196 | |||
|description=CAGE_peak_2_at_TNFRSF17_5end | |||
|id=chr16:12059021..12059048,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.90e-66!24;CL:0000826!4.90e-66!24;CL:0000236!1.71e-36!14;CL:0000542!7.80e-29!53;CL:0000051!7.80e-29!53;CL:0000838!7.21e-27!52;CL:0002087!3.13e-13!119;CL:0000738!3.24e-13!140;CL:0002031!2.71e-11!124;CL:0000784!9.14e-10!3;CL:0000037!2.47e-09!172;CL:0000566!2.47e-09!172;CL:0000988!2.04e-08!182;CL:0002032!2.28e-08!165;CL:0000837!2.28e-08!165;CL:0000785!1.85e-07!2;CL:0000955!1.85e-07!2;CL:0000818!1.85e-07!2;CL:0000954!1.85e-07!2;CL:0000816!1.85e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.33e-114;24!CL:0000236;1.52e-57;13!CL:0000542;4.81e-32;53!CL:0000784;7.61e-16;3!CL:0002087;1.05e-07;104!CL:0000946;8.49e-07;1!CL:0000786;8.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.05e-114,24;CL:0000826,2.05e-114,24;CL:0000236,9.95e-63,14;CL:0000542,1.20e-53,53;CL:0000051,1.20e-53,53;CL:0000838,4.34e-50,52;CL:0002087,1.17e-23,115;CL:0000738,7.31e-23,136;CL:0002031,1.91e-20,120;CL:0000037,1.95e-17,168;CL:0000988,2.92e-16,177;CL:0000784,8.67e-16,3;CL:0002032,2.17e-15,161;CL:0000837,2.17e-15,161;CL:0000785,8.51e-12,2;CL:0000955,8.51e-12,2;CL:0000818,8.51e-12,2;CL:0000954,8.51e-12,2;CL:0000816,8.51e-12,2;CL:0000817,3.82e-08,3;CL:0000946,8.97e-07,1;CL:0000786,8.97e-07,1;CL:0000980,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.81e-32;53!CL:0000954;8.28e-12;2!UBERON:0004872;2.76e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.18e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.93e-19;10!DOID:4960;6.25e-07;1!DOID:0070004;6.25e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.72e-19,10;DOID:4960,6.43e-07,1;DOID:0070004,6.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-15!115;UBERON:0004177!3.38e-10!7;UBERON:0002106!8.87e-10!3;UBERON:0004854!8.87e-10!3;UBERON:0009034!8.87e-10!3;UBERON:0002095!8.87e-10!3;UBERON:0004782!8.87e-10!3;UBERON:0003281!8.87e-10!3;UBERON:0009664!8.87e-10!3;UBERON:0002296!8.87e-10!3;UBERON:0005602!8.87e-10!3;UBERON:0001179!8.87e-10!3;UBERON:0006293!8.87e-10!3;UBERON:0003408!8.37e-07!10;UBERON:0001829!8.74e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.32e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.72e-08,3;UBERON:0004854,4.72e-08,3;UBERON:0009034,4.72e-08,3;UBERON:0002095,4.72e-08,3;UBERON:0004782,4.72e-08,3;UBERON:0003281,4.72e-08,3;UBERON:0009664,4.72e-08,3;UBERON:0002296,4.72e-08,3;UBERON:0005602,4.72e-08,3;UBERON:0001179,4.72e-08,3;UBERON:0006293,4.72e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6214633989652,12.8076919541915,16.6866856385,0,0,0.309632246632152,0,0,0,5.34523684004081,1.42169232487422,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0796995569058,18.0225741716503,11.5636203002262,17.4959391252268,8.40831572775626,14.9435634388166,9.91567309177293,10.494591299889,2.27685187643779,2.34894875748376,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,1.19245312152671,2.28797964312051,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0,1.90585420366231,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,8.36114288065734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,11.6930565188016,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94606641907346,0.611030144933625,0,0,0,0,0,0,5.47364367646998,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,3.21758661849981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47316215268366,27.0727935700184,29.9609792017004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3994785355787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,10.3710588800201,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.218559560503957,0,0,0,0,0,0,0,2.16163011353663,0.322289439867886,11.3932917754419,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0,0.322944549180031,0.0620747142958579,0,0.0636471582781649,0,0,0,4.17582728690443,0.645499848534087,0,0,0,0,0,0,0,0,0,1.00636896795513,4.16739039994203 | |||
|short_description=p2@TNFRSF17 | |||
}} |
Revision as of 09:15, 11 September 2013
Short description: | p2@TNFRSF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TNFRSF17_5end |
Coexpression cluster: | C1196_lymphoma_CD19_diffuse_lymphangiectasia_B_xeroderma_b |
Association with transcript: | -31bp_to_ENST00000396495_5end |
EntrezGene: | TNFRSF17 |
HGNC: | 11913 |
UniProt: | Q2TQ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.05e-114 | 24 |
pro-B cell | 2.05e-114 | 24 |
B cell | 9.95e-63 | 14 |
lymphocyte | 1.20e-53 | 53 |
common lymphoid progenitor | 1.20e-53 | 53 |
lymphoid lineage restricted progenitor cell | 4.34e-50 | 52 |
nongranular leukocyte | 1.17e-23 | 115 |
leukocyte | 7.31e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 1.91e-20 | 120 |
hematopoietic stem cell | 1.95e-17 | 168 |
hematopoietic cell | 2.92e-16 | 177 |
plasmacytoid dendritic cell | 8.67e-16 | 3 |
hematopoietic oligopotent progenitor cell | 2.17e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-15 | 161 |
mature B cell | 8.51e-12 | 2 |
pre-B-II cell | 8.51e-12 | 2 |
transitional stage B cell | 8.51e-12 | 2 |
small pre-B-II cell | 8.51e-12 | 2 |
immature B cell | 8.51e-12 | 2 |
precursor B cell | 3.82e-08 | 3 |
antibody secreting cell | 8.97e-07 | 1 |
plasma cell | 8.97e-07 | 1 |
plasmablast | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.72e-08 | 3 |
gastrointestinal system mesentery | 4.72e-08 | 3 |
stomach region | 4.72e-08 | 3 |
mesentery | 4.72e-08 | 3 |
gastrointestinal system serosa | 4.72e-08 | 3 |
mesentery of stomach | 4.72e-08 | 3 |
gut mesentery | 4.72e-08 | 3 |
dorsal mesentery | 4.72e-08 | 3 |
dorsal mesogastrium | 4.72e-08 | 3 |
peritoneal cavity | 4.72e-08 | 3 |
spleen primordium | 4.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.72e-19 | 10 |
bone marrow cancer | 6.43e-07 | 1 |
myeloma | 6.43e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.