FFCP PHASE1:Hg19::chr15:99433535..99433552,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3480|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5465|TSSclassifier=S|UniProt=|association_with_transcript=-17bp_to_ENST00000558898_5end|description=CAGE_peak_16_at_IGF1R_5end|id=chr15:99433535..99433552,+|ontology_enrichment_celltype=CL:0002368!1.10e-11!13;CL:0000066!9.79e-10!254;CL:0000221!4.26e-09!71;CL:0000220!1.55e-08!246;CL:0002321!2.52e-08!248;CL:0000548!6.08e-08!679;CL:0000004!6.08e-08!679;CL:0000255!6.08e-08!679;CL:0000012!9.82e-08!682;CL:0000243!1.90e-07!15;CL:0000125!1.90e-07!15;CL:0000030!1.90e-07!15;CL:0000339!1.90e-07!15;CL:0002202!3.57e-07!9;CL:0002632!3.57e-07!9;CL:0002076!6.92e-07!43|ontology_enrichment_celltype_v019=CL:0002166;2.60e-15;3!CL:0002621;7.08e-15;3!CL:0002605;8.16e-15;3!CL:0000128;2.96e-11;7!CL:0000126;2.96e-11;7!CL:0000127;2.96e-11;7!CL:0002368;2.83e-09;13!CL:0002076;2.79e-08;42!CL:0000307;1.24e-07;3|ontology_enrichment_celltype_v019_2=CL:0002166,3.93e-15,3;CL:0002605,7.64e-15,3;CL:0002621,1.48e-14,3;CL:0000128,2.86e-11,7;CL:0000126,2.86e-11,7;CL:0000127,2.86e-11,7;CL:0002453,2.86e-11,7;CL:0002076,1.32e-09,42;CL:0002368,2.42e-09,13;CL:0000066,2.64e-09,253;CL:0000223,8.28e-08,58;CL:0000068,1.39e-07,3;CL:0000069,1.39e-07,3;CL:0000307,1.39e-07,3;CL:0000377,1.39e-07,3|ontology_enrichment_development_v019=UBERON:0008947;3.99e-09;29!CL:0000377;1.24e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!4.00e-13!9;UBERON:0000065!1.05e-09!53;UBERON:0008947!1.37e-09!38;UBERON:0003258!1.37e-09!38;UBERON:0001004!4.55e-09!72;UBERON:0000072!8.18e-08!46|ontology_enrichment_uberon_v019=UBERON:0001737;3.68e-32;9!UBERON:0001557;3.68e-32;9!UBERON:0001949;7.08e-15;3!UBERON:0000065;4.52e-14;44!UBERON:0000072;9.30e-13;37!UBERON:0001708;1.32e-11;4!UBERON:0008895;1.32e-11;4!UBERON:0001004;4.19e-10;65!UBERON:0003350;1.36e-09;8!UBERON:0000486;1.49e-09;12!UBERON:0011159;2.26e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.24e-32,9;UBERON:0001557,8.46e-15,19;UBERON:0001004,8.55e-15,74;UBERON:0001949,1.48e-14,3;UBERON:0008947,4.71e-13,38;UBERON:0003258,4.71e-13,38;UBERON:0000065,2.76e-12,54;UBERON:0001708,1.80e-11,4;UBERON:0008895,1.80e-11,4;UBERON:0000072,3.89e-10,47;UBERON:0003350,1.83e-09,8;UBERON:0011159,2.88e-09,5;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0010188,8.63e-08,6;UBERON:0002539,8.63e-08,6;UBERON:0008816,8.63e-08,6|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.61560529038394,0,0,1.14494394852423,3.28498620174922,1.63205431473244,0,0,0,0,0,0,0.919421224478927,1.8072355126695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.443458794925128,0.351339142772504,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0,0,0,4.44499962275583,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,2.24782920075703,2.19160097101532,1.44606617930089,1.98529150918309,2.83243277320128,1.42362371466658,1.61797569792197,0.588664395376038,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,1.15930404975077,0.469634776943287,0,0,0,0,0,0,0,0,3.74935335947108,3.19166043577833,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0.254094624222463,0,1.54657762555539,0.837581326671744,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.232420756919918,0,1.60405176242628,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,2.49847087574638,12.6336585369638,0.809262246844399,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,0.286822704408103,0,0.7133421029625,0.354761064070598,0,0,0.379473173765715,0,0.769776901804097,4.69211592875051,2.17781969722645,0,1.29151611801369,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0.164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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5465 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000558898_5end | |||
|description=CAGE_peak_16_at_IGF1R_5end | |||
|id=chr15:99433535..99433552,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.10e-11!13;CL:0000066!9.79e-10!254;CL:0000221!4.26e-09!71;CL:0000220!1.55e-08!246;CL:0002321!2.52e-08!248;CL:0000548!6.08e-08!679;CL:0000004!6.08e-08!679;CL:0000255!6.08e-08!679;CL:0000012!9.82e-08!682;CL:0000243!1.90e-07!15;CL:0000125!1.90e-07!15;CL:0000030!1.90e-07!15;CL:0000339!1.90e-07!15;CL:0002202!3.57e-07!9;CL:0002632!3.57e-07!9;CL:0002076!6.92e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.60e-15;3!CL:0002621;7.08e-15;3!CL:0002605;8.16e-15;3!CL:0000128;2.96e-11;7!CL:0000126;2.96e-11;7!CL:0000127;2.96e-11;7!CL:0002368;2.83e-09;13!CL:0002076;2.79e-08;42!CL:0000307;1.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.93e-15,3;CL:0002605,7.64e-15,3;CL:0002621,1.48e-14,3;CL:0000128,2.86e-11,7;CL:0000126,2.86e-11,7;CL:0000127,2.86e-11,7;CL:0002453,2.86e-11,7;CL:0002076,1.32e-09,42;CL:0002368,2.42e-09,13;CL:0000066,2.64e-09,253;CL:0000223,8.28e-08,58;CL:0000068,1.39e-07,3;CL:0000069,1.39e-07,3;CL:0000307,1.39e-07,3;CL:0000377,1.39e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.99e-09;29!CL:0000377;1.24e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.00e-13!9;UBERON:0000065!1.05e-09!53;UBERON:0008947!1.37e-09!38;UBERON:0003258!1.37e-09!38;UBERON:0001004!4.55e-09!72;UBERON:0000072!8.18e-08!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.68e-32;9!UBERON:0001557;3.68e-32;9!UBERON:0001949;7.08e-15;3!UBERON:0000065;4.52e-14;44!UBERON:0000072;9.30e-13;37!UBERON:0001708;1.32e-11;4!UBERON:0008895;1.32e-11;4!UBERON:0001004;4.19e-10;65!UBERON:0003350;1.36e-09;8!UBERON:0000486;1.49e-09;12!UBERON:0011159;2.26e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.24e-32,9;UBERON:0001557,8.46e-15,19;UBERON:0001004,8.55e-15,74;UBERON:0001949,1.48e-14,3;UBERON:0008947,4.71e-13,38;UBERON:0003258,4.71e-13,38;UBERON:0000065,2.76e-12,54;UBERON:0001708,1.80e-11,4;UBERON:0008895,1.80e-11,4;UBERON:0000072,3.89e-10,47;UBERON:0003350,1.83e-09,8;UBERON:0011159,2.88e-09,5;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0010188,8.63e-08,6;UBERON:0002539,8.63e-08,6;UBERON:0008816,8.63e-08,6 | |||
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|short_description=p16@IGF1R | |||
}} |
Revision as of 09:06, 11 September 2013
Short description: | p16@IGF1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_IGF1R_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000558898_5end |
EntrezGene: | IGF1R |
HGNC: | 5465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.93e-15 | 3 |
astrocyte of the cerebral cortex | 7.64e-15 | 3 |
gingival epithelial cell | 1.48e-14 | 3 |
oligodendrocyte | 2.86e-11 | 7 |
macroglial cell | 2.86e-11 | 7 |
astrocyte | 2.86e-11 | 7 |
oligodendrocyte precursor cell | 2.86e-11 | 7 |
endo-epithelial cell | 1.32e-09 | 42 |
respiratory epithelial cell | 2.42e-09 | 13 |
epithelial cell | 2.64e-09 | 253 |
endodermal cell | 8.28e-08 | 58 |
duct epithelial cell | 1.39e-07 | 3 |
branched duct epithelial cell | 1.39e-07 | 3 |
tracheal epithelial cell | 1.39e-07 | 3 |
tracheoblast | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.24e-32 | 9 |
upper respiratory tract | 8.46e-15 | 19 |
respiratory system | 8.55e-15 | 74 |
gingival epithelium | 1.48e-14 | 3 |
respiratory primordium | 4.71e-13 | 38 |
endoderm of foregut | 4.71e-13 | 38 |
respiratory tract | 2.76e-12 | 54 |
jaw skeleton | 1.80e-11 | 4 |
splanchnocranium | 1.80e-11 | 4 |
segment of respiratory tract | 3.89e-10 | 47 |
epithelium of mucosa | 1.83e-09 | 8 |
primary subdivision of cranial skeletal system | 2.88e-09 | 5 |
endoderm-derived structure | 3.60e-08 | 160 |
endoderm | 3.60e-08 | 160 |
presumptive endoderm | 3.60e-08 | 160 |
protuberance | 8.63e-08 | 6 |
pharyngeal arch | 8.63e-08 | 6 |
embryonic head | 8.63e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.