FFCP PHASE1:Hg19::chr15:86126091..86126118,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=371|TSSclassifier=S|UniProt=|association_with_transcript=-22bp_to_ENST00000560340_5end|coexpression_cluster_id=C2353|description=CAGE_peak_7_at_AKAP13_5end|id=chr15:86126091..86126118,+|ontology_enrichment_celltype=CL:0000738!3.09e-45!140;CL:0000037!1.14e-39!172;CL:0000566!1.14e-39!172;CL:0000988!6.74e-39!182;CL:0002031!4.42e-38!124;CL:0002032!2.18e-36!165;CL:0000837!2.18e-36!165;CL:0002087!1.45e-33!119;CL:0000766!4.28e-29!76;CL:0000557!7.09e-28!71;CL:0000839!4.50e-26!70;CL:0000763!5.35e-25!112;CL:0000049!5.35e-25!112;CL:0002057!8.99e-24!42;CL:0002009!2.24e-23!65;CL:0002194!5.95e-22!63;CL:0000576!5.95e-22!63;CL:0000040!5.95e-22!63;CL:0000559!5.95e-22!63;CL:0000860!1.72e-21!45;CL:0000084!5.43e-11!25;CL:0000827!5.43e-11!25;CL:0000791!5.68e-11!18;CL:0000789!5.68e-11!18;CL:0002420!5.68e-11!18;CL:0002419!5.68e-11!18;CL:0000790!5.68e-11!18;CL:0000838!8.65e-11!52;CL:0000542!2.66e-10!53;CL:0000051!2.66e-10!53;CL:0000451!2.01e-07!10;CL:0000625!2.18e-07!11;CL:0000134!7.17e-07!358|ontology_enrichment_celltype_v019=CL:0000860;3.35e-24;33!CL:0002057;3.35e-24;33!CL:0000473;3.43e-23;39!CL:0000234;3.43e-23;39!CL:0000766;7.77e-17;69!CL:0000576;1.09e-16;48!CL:0000791;6.56e-14;18!CL:0000789;6.56e-14;18!CL:0002419;6.56e-14;18!CL:0000084;2.38e-13;25!CL:0002087;1.97e-12;104!CL:0000738;1.09e-11;136!CL:0000625;1.38e-09;11!CL:0000451;9.74e-09;10!CL:0000763;4.36e-08;100!CL:0000988;5.04e-08;177!CL:0000097;1.91e-07;5|ontology_enrichment_celltype_v019_2=CL:0000738,1.23e-55,136;CL:0000037,8.44e-44,168;CL:0000988,2.49e-43,177;CL:0002031,4.44e-43,120;CL:0002032,2.85e-39,161;CL:0000837,2.85e-39,161;CL:0002087,3.78e-39,115;CL:0000766,7.91e-39,72;CL:0000557,8.42e-37,67;CL:0000839,4.01e-32,66;CL:0002009,2.07e-30,61;CL:0000473,9.49e-30,48;CL:0000234,9.49e-30,48;CL:0000763,2.13e-28,108;CL:0000049,2.13e-28,108;CL:0002194,2.15e-28,59;CL:0000576,2.15e-28,59;CL:0000040,2.15e-28,59;CL:0000559,2.15e-28,59;CL:0000860,5.90e-26,42;CL:0002057,5.90e-26,42;CL:0000791,4.83e-14,18;CL:0000789,4.83e-14,18;CL:0002420,4.83e-14,18;CL:0002419,4.83e-14,18;CL:0000790,4.83e-14,18;CL:0000084,2.52e-13,25;CL:0000827,2.52e-13,25;CL:0000838,2.82e-10,52;CL:0000542,6.57e-10,53;CL:0000051,6.57e-10,53;CL:0000625,6.99e-10,11;CL:0000134,6.96e-09,354;CL:0000451,9.17e-09,10;CL:0002320,3.57e-08,361;CL:0000097,1.92e-07,5;CL:0002028,1.92e-07,5|ontology_enrichment_development_v019=CL:0002057;1.87e-19;42!CL:0000790;6.56e-14;18!CL:0000049;2.95e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.79e-30!112;UBERON:0002390!4.96e-29!102;UBERON:0003061!4.96e-29!102;UBERON:0002371!1.40e-22!80;UBERON:0002405!2.02e-19!115;UBERON:0001474!4.81e-19!86;UBERON:0003081!4.14e-18!216;UBERON:0007023!2.35e-16!115;UBERON:0004765!3.38e-13!101;UBERON:0001434!3.38e-13!101|ontology_enrichment_uberon_v019=UBERON:0000178;6.64e-07;15!UBERON:0000179;6.64e-07;15!UBERON:0000463;6.64e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-40,98;UBERON:0003061,1.90e-40,98;UBERON:0002193,7.15e-40,108;UBERON:0002405,1.48e-33,93;UBERON:0002371,2.29e-31,76;UBERON:0001474,1.44e-27,82;UBERON:0003081,4.88e-25,203;UBERON:0004765,2.44e-23,90;UBERON:0001434,4.48e-19,100;UBERON:0000926,3.89e-11,315;UBERON:0004120,3.89e-11,315;UBERON:0006603,3.89e-11,315;UBERON:0002204,2.85e-08,167;UBERON:0002384,1.23e-07,371;UBERON:0000178,6.66e-07,15;UBERON:0000179,6.66e-07,15;UBERON:0000463,6.66e-07,15|phase1_expression=0,0.428201047781966,0.845726424575827,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0.534893840235659,0.164201178899891,0.472264687882075,19.2748495655963,21.1106168953467,8.51488678238418,0,0,0,0.0774672005803016,0.568676929949686,2.93600439334847,9.41792194504192,19.2522669571336,10.8505435357926,1.56740831967947,3.56283032620878,2.31818010870768,10.3232749533491,13.2256580291083,16.2531320995837,9.76201955003875,11.5127008646111,9.60089749774821,4.60307827715441,3.58624989140741,8.0403958162119,9.3081333798887,12.9096936716765,13.5426486594342,17.3182952379196,15.2827444032394,16.1800908800461,13.1616073719488,28.2417543826962,14.7047538933779,5.93732340336089,4.3882004676759,9.80316926225197,12.7692064996577,17.0215567407342,15.5705562248894,4.01997864410789,6.25779502104242,12.3797641481916,3.63239701580021,19.5187147073409,18.9877432464531,1.05627643155971,1.4882300997553,0.628975936525128,0.336985893439485,0.750884464207532,0.64290234678832,0.285012743741249,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,15.9379631350646,18.2043528704991,8.02773779062981,6.60856642895129,19.6177997043538,0.526768169550154,13.5729741378545,27.9037641551907,20.3545484009514,2.34061093546949,0.32592226663359,0.946895611469467,0,10.8068143178618,12.0788422064683,7.75368631042674,15.9774279621359,9.99112293860266,10.7949258474699,0.9866274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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=371 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000560340_5end | |||
|coexpression_cluster_id=C2353 | |||
|description=CAGE_peak_7_at_AKAP13_5end | |||
|id=chr15:86126091..86126118,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.09e-45!140;CL:0000037!1.14e-39!172;CL:0000566!1.14e-39!172;CL:0000988!6.74e-39!182;CL:0002031!4.42e-38!124;CL:0002032!2.18e-36!165;CL:0000837!2.18e-36!165;CL:0002087!1.45e-33!119;CL:0000766!4.28e-29!76;CL:0000557!7.09e-28!71;CL:0000839!4.50e-26!70;CL:0000763!5.35e-25!112;CL:0000049!5.35e-25!112;CL:0002057!8.99e-24!42;CL:0002009!2.24e-23!65;CL:0002194!5.95e-22!63;CL:0000576!5.95e-22!63;CL:0000040!5.95e-22!63;CL:0000559!5.95e-22!63;CL:0000860!1.72e-21!45;CL:0000084!5.43e-11!25;CL:0000827!5.43e-11!25;CL:0000791!5.68e-11!18;CL:0000789!5.68e-11!18;CL:0002420!5.68e-11!18;CL:0002419!5.68e-11!18;CL:0000790!5.68e-11!18;CL:0000838!8.65e-11!52;CL:0000542!2.66e-10!53;CL:0000051!2.66e-10!53;CL:0000451!2.01e-07!10;CL:0000625!2.18e-07!11;CL:0000134!7.17e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-24;33!CL:0002057;3.35e-24;33!CL:0000473;3.43e-23;39!CL:0000234;3.43e-23;39!CL:0000766;7.77e-17;69!CL:0000576;1.09e-16;48!CL:0000791;6.56e-14;18!CL:0000789;6.56e-14;18!CL:0002419;6.56e-14;18!CL:0000084;2.38e-13;25!CL:0002087;1.97e-12;104!CL:0000738;1.09e-11;136!CL:0000625;1.38e-09;11!CL:0000451;9.74e-09;10!CL:0000763;4.36e-08;100!CL:0000988;5.04e-08;177!CL:0000097;1.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.23e-55,136;CL:0000037,8.44e-44,168;CL:0000988,2.49e-43,177;CL:0002031,4.44e-43,120;CL:0002032,2.85e-39,161;CL:0000837,2.85e-39,161;CL:0002087,3.78e-39,115;CL:0000766,7.91e-39,72;CL:0000557,8.42e-37,67;CL:0000839,4.01e-32,66;CL:0002009,2.07e-30,61;CL:0000473,9.49e-30,48;CL:0000234,9.49e-30,48;CL:0000763,2.13e-28,108;CL:0000049,2.13e-28,108;CL:0002194,2.15e-28,59;CL:0000576,2.15e-28,59;CL:0000040,2.15e-28,59;CL:0000559,2.15e-28,59;CL:0000860,5.90e-26,42;CL:0002057,5.90e-26,42;CL:0000791,4.83e-14,18;CL:0000789,4.83e-14,18;CL:0002420,4.83e-14,18;CL:0002419,4.83e-14,18;CL:0000790,4.83e-14,18;CL:0000084,2.52e-13,25;CL:0000827,2.52e-13,25;CL:0000838,2.82e-10,52;CL:0000542,6.57e-10,53;CL:0000051,6.57e-10,53;CL:0000625,6.99e-10,11;CL:0000134,6.96e-09,354;CL:0000451,9.17e-09,10;CL:0002320,3.57e-08,361;CL:0000097,1.92e-07,5;CL:0002028,1.92e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-19;42!CL:0000790;6.56e-14;18!CL:0000049;2.95e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.79e-30!112;UBERON:0002390!4.96e-29!102;UBERON:0003061!4.96e-29!102;UBERON:0002371!1.40e-22!80;UBERON:0002405!2.02e-19!115;UBERON:0001474!4.81e-19!86;UBERON:0003081!4.14e-18!216;UBERON:0007023!2.35e-16!115;UBERON:0004765!3.38e-13!101;UBERON:0001434!3.38e-13!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.64e-07;15!UBERON:0000179;6.64e-07;15!UBERON:0000463;6.64e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-40,98;UBERON:0003061,1.90e-40,98;UBERON:0002193,7.15e-40,108;UBERON:0002405,1.48e-33,93;UBERON:0002371,2.29e-31,76;UBERON:0001474,1.44e-27,82;UBERON:0003081,4.88e-25,203;UBERON:0004765,2.44e-23,90;UBERON:0001434,4.48e-19,100;UBERON:0000926,3.89e-11,315;UBERON:0004120,3.89e-11,315;UBERON:0006603,3.89e-11,315;UBERON:0002204,2.85e-08,167;UBERON:0002384,1.23e-07,371;UBERON:0000178,6.66e-07,15;UBERON:0000179,6.66e-07,15;UBERON:0000463,6.66e-07,15 | |||
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| |||
|short_description=p7@AKAP13 | |||
}} |
Revision as of 08:41, 11 September 2013
Short description: | p7@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_AKAP13_5end |
Coexpression cluster: | C2353_Mast_immature_Natural_CD8_CD4_CD14_Basophils |
Association with transcript: | -22bp_to_ENST00000560340_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.90e-40 | 98 |
blood island | 1.90e-40 | 98 |
hemolymphoid system | 7.15e-40 | 108 |
immune system | 1.48e-33 | 93 |
bone marrow | 2.29e-31 | 76 |
bone element | 1.44e-27 | 82 |
lateral plate mesoderm | 4.88e-25 | 203 |
skeletal element | 2.44e-23 | 90 |
skeletal system | 4.48e-19 | 100 |
mesoderm | 3.89e-11 | 315 |
mesoderm-derived structure | 3.89e-11 | 315 |
presumptive mesoderm | 3.89e-11 | 315 |
musculoskeletal system | 2.85e-08 | 167 |
connective tissue | 1.23e-07 | 371 |
blood | 6.66e-07 | 15 |
haemolymphatic fluid | 6.66e-07 | 15 |
organism substance | 6.66e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.