FFCP PHASE1:Hg19::chr15:85201601..85201612,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4828|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7842|TSSclassifier=N|UniProt=P08949|association_with_transcript=166bp_to_ENST00000360476_5end|description=CAGE_peak_4_at_NMB_5end|id=chr15:85201601..85201612,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002567;1.89e-12;3!CL:0002681;4.04e-07;12!CL:0002584;4.04e-07;12|ontology_enrichment_celltype_v019_2=CL:0002567,1.05e-12,3;CL:0002681,4.55e-07,12;CL:0002584,4.55e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001851;1.28e-09;15!UBERON:0003891;1.45e-09;4!UBERON:0000964;1.45e-09;4!UBERON:0010409;1.45e-09;4!UBERON:0001225;4.04e-07;12!UBERON:0008987;4.04e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001851,1.45e-09,15;UBERON:0000964,2.15e-09,4;UBERON:0010409,2.15e-09,4;UBERON:0004348,2.15e-09,4;UBERON:0005427,2.15e-09,4;UBERON:0003891,2.54e-09,4;UBERON:0001225,4.55e-07,12;UBERON:0008987,4.55e-07,12|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0.821127996921047,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0.289693037921647,0,0,0.0945348171640679,0.886917589850256,0.087834785693126,0.654895377488563,1.09288586487763,0,0.97364218096405,1.0447784237956,0.132957960518865,0,0,0,0,1.72046919021225,0.694281003215189,0,0,0.550236083880135,0.626984899610432,0.775250277507987,1.06729878806013,0.33472061276467,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.535798369704479,0.673588117878509,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0,1.12135520028461,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0.624320153660641,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0,0.907457465280168,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,3.37205259772859,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,1.44331342025273,0,0,0.577465791044295,0,0,0,0,0,0,0.148631162288728,1.87467667973554,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,1.90994212779139,0,1.71072446022705,0.308482478109971,0.600686115687835,0,0,0.43596006883328,0.36669142910475,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,0,0,0.434343920002738,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0.321707842287215,0,0,0.532685175939381,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0,3.08454505380579,0.270946437543853,1.00337954770971,0.509752546090077,1.66215201785745,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0,0.340906509664404,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0.74129687641568,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0.405820753925408,0,0.845086807596724,0,0,0.7133421029625,0,0,0.329294892959902,0,0.349934720244983,0.48111056362756,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0.199579371432817,0.383010740264733,0,0.324621940274555,0,0.456469358066384,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0.894704431569664,0.333698283423817,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,2.30584991324076,0.222886768554957,0.284136146806413,0,0.29696468083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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4828 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7842 | |||
|TSSclassifier=N | |||
|UniProt=P08949 | |||
|association_with_transcript=166bp_to_ENST00000360476_5end | |||
|description=CAGE_peak_4_at_NMB_5end | |||
|id=chr15:85201601..85201612,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.89e-12;3!CL:0002681;4.04e-07;12!CL:0002584;4.04e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.05e-12,3;CL:0002681,4.55e-07,12;CL:0002584,4.55e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;1.28e-09;15!UBERON:0003891;1.45e-09;4!UBERON:0000964;1.45e-09;4!UBERON:0010409;1.45e-09;4!UBERON:0001225;4.04e-07;12!UBERON:0008987;4.04e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,1.45e-09,15;UBERON:0000964,2.15e-09,4;UBERON:0010409,2.15e-09,4;UBERON:0004348,2.15e-09,4;UBERON:0005427,2.15e-09,4;UBERON:0003891,2.54e-09,4;UBERON:0001225,4.55e-07,12;UBERON:0008987,4.55e-07,12 | |||
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| |||
|short_description=p4@NMB | |||
}} |
Revision as of 08:38, 11 September 2013
Short description: | p4@NMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NMB_5end |
Coexpression cluster: | NA |
Association with transcript: | 166bp_to_ENST00000360476_5end |
EntrezGene: | NMB |
HGNC: | 7842 |
UniProt: | P08949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.05e-12 | 3 |
kidney cortical cell | 4.55e-07 | 12 |
renal cortical epithelial cell | 4.55e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cortex | 1.45e-09 | 15 |
cornea | 2.15e-09 | 4 |
eye surface | 2.15e-09 | 4 |
optic eminence | 2.15e-09 | 4 |
corneal primordium | 2.15e-09 | 4 |
stroma | 2.54e-09 | 4 |
cortex of kidney | 4.55e-07 | 12 |
renal parenchyma | 4.55e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.