FFCP PHASE1:Hg19::chr15:75498518..75498532,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56905|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24497|TSSclassifier=S|UniProt=F8WBD1|association_with_transcript=-2bp_to_ENST00000446981_5end|coexpression_cluster_id=C13|description=CAGE_peak_13_at_C15orf39_5end|id=chr15:75498518..75498532,+|ontology_enrichment_celltype=CL:0000860!9.94e-30!45;CL:0002057!4.08e-29!42;CL:0000766!4.47e-19!76;CL:0002194!1.60e-17!63;CL:0000576!1.60e-17!63;CL:0000040!1.60e-17!63;CL:0000559!1.60e-17!63;CL:0002009!2.29e-17!65;CL:0000763!2.30e-17!112;CL:0000049!2.30e-17!112;CL:0000839!3.94e-17!70;CL:0000738!1.45e-16!140;CL:0000557!1.85e-16!71;CL:0000037!5.05e-16!172;CL:0000566!5.05e-16!172;CL:0002032!4.03e-15!165;CL:0000837!4.03e-15!165;CL:0002087!2.38e-14!119;CL:0000988!3.23e-14!182;CL:0002031!5.89e-13!124|ontology_enrichment_celltype_v019=CL:0000860;5.34e-66;33!CL:0002057;5.34e-66;33!CL:0000473;5.16e-49;39!CL:0000234;5.16e-49;39!CL:0000576;5.09e-38;48!CL:0000766;1.19e-32;69!CL:0000775;2.10e-17;3!CL:0000763;1.25e-14;100!CL:0000094;4.45e-11;8!CL:0000738;1.48e-09;136!CL:0002087;3.35e-09;104!CL:0002393;4.18e-08;6!CL:0002397;4.18e-08;6!CL:0000081;4.53e-08;11|ontology_enrichment_celltype_v019_2=CL:0000860,4.80e-72,42;CL:0002057,4.80e-72,42;CL:0000473,2.35e-62,48;CL:0000234,2.35e-62,48;CL:0000766,2.31e-58,72;CL:0002194,8.70e-49,59;CL:0000576,8.70e-49,59;CL:0000040,8.70e-49,59;CL:0000559,8.70e-49,59;CL:0002009,4.91e-47,61;CL:0000839,7.26e-47,66;CL:0000557,4.30e-46,67;CL:0000763,5.06e-37,108;CL:0000049,5.06e-37,108;CL:0000738,2.69e-30,136;CL:0002087,1.32e-24,115;CL:0002031,2.08e-23,120;CL:0000037,2.44e-23,168;CL:0002032,7.63e-23,161;CL:0000837,7.63e-23,161;CL:0000988,7.84e-22,177;CL:0000775,1.79e-17,3;CL:0000094,4.24e-11,8;CL:0000134,2.86e-10,354;CL:0002320,6.15e-10,361;CL:0000219,9.16e-09,386;CL:0000081,4.38e-08,11;CL:0000048,4.44e-08,427;CL:0000723,7.21e-08,433;CL:0000034,1.35e-07,441|ontology_enrichment_development_v019=CL:0002057;2.99e-54;42!CL:0000049;6.85e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.73e-16!102;UBERON:0003061!1.73e-16!102;UBERON:0002193!6.31e-16!112;UBERON:0002405!2.54e-14!115;UBERON:0002371!1.69e-13!80;UBERON:0001474!6.84e-12!86;UBERON:0004765!2.59e-09!101;UBERON:0001434!2.59e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.84e-40,76;UBERON:0001474,9.79e-37,82;UBERON:0002390,3.98e-35,98;UBERON:0003061,3.98e-35,98;UBERON:0004765,5.26e-33,90;UBERON:0002405,9.03e-32,93;UBERON:0002193,2.36e-31,108;UBERON:0001434,3.57e-29,100;UBERON:0002204,1.02e-16,167;UBERON:0003081,1.45e-16,203;UBERON:0002384,1.75e-09,371;UBERON:0000926,1.85e-08,315;UBERON:0004120,1.85e-08,315;UBERON:0006603,1.85e-08,315|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,1.34465029290355,0,0,0,0,0,0,0,0.136874425072884,0,0.764134057479513,0.821005894499457,0.550975469195755,0,0,0.464448369948228,0,0,0.739508020333575,0,0,0,0,1.80490002723128,1.08505435357926,0,0,0,1.59938062657521,1.88937971844405,0.727752183563449,3.0215774797739,2.05583944010913,1.85823822537062,3.45230870786581,3.07392847834921,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,3.57660445130949,0.818718450173537,0.674170453335254,2.44867113896722,0.962787081228281,1.27867425159808,1.64925650093358,2.79249120670285,2.55734850319616,2.32167390902867,1.70215567407342,2.4912889959823,1.25624332628372,4.17186334736161,0.217188844705117,3.02699751316684,0.368277635987565,0.316462387440884,1.26753171787165,0.425208599930087,0,0.44931452458598,0.450530678524519,1.12507910687956,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0.366403487860815,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,1.47798971368783,0,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24497 | |||
|TSSclassifier=S | |||
|UniProt=F8WBD1 | |||
|association_with_transcript=-2bp_to_ENST00000446981_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_13_at_C15orf39_5end | |||
|id=chr15:75498518..75498532,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.94e-30!45;CL:0002057!4.08e-29!42;CL:0000766!4.47e-19!76;CL:0002194!1.60e-17!63;CL:0000576!1.60e-17!63;CL:0000040!1.60e-17!63;CL:0000559!1.60e-17!63;CL:0002009!2.29e-17!65;CL:0000763!2.30e-17!112;CL:0000049!2.30e-17!112;CL:0000839!3.94e-17!70;CL:0000738!1.45e-16!140;CL:0000557!1.85e-16!71;CL:0000037!5.05e-16!172;CL:0000566!5.05e-16!172;CL:0002032!4.03e-15!165;CL:0000837!4.03e-15!165;CL:0002087!2.38e-14!119;CL:0000988!3.23e-14!182;CL:0002031!5.89e-13!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.34e-66;33!CL:0002057;5.34e-66;33!CL:0000473;5.16e-49;39!CL:0000234;5.16e-49;39!CL:0000576;5.09e-38;48!CL:0000766;1.19e-32;69!CL:0000775;2.10e-17;3!CL:0000763;1.25e-14;100!CL:0000094;4.45e-11;8!CL:0000738;1.48e-09;136!CL:0002087;3.35e-09;104!CL:0002393;4.18e-08;6!CL:0002397;4.18e-08;6!CL:0000081;4.53e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.80e-72,42;CL:0002057,4.80e-72,42;CL:0000473,2.35e-62,48;CL:0000234,2.35e-62,48;CL:0000766,2.31e-58,72;CL:0002194,8.70e-49,59;CL:0000576,8.70e-49,59;CL:0000040,8.70e-49,59;CL:0000559,8.70e-49,59;CL:0002009,4.91e-47,61;CL:0000839,7.26e-47,66;CL:0000557,4.30e-46,67;CL:0000763,5.06e-37,108;CL:0000049,5.06e-37,108;CL:0000738,2.69e-30,136;CL:0002087,1.32e-24,115;CL:0002031,2.08e-23,120;CL:0000037,2.44e-23,168;CL:0002032,7.63e-23,161;CL:0000837,7.63e-23,161;CL:0000988,7.84e-22,177;CL:0000775,1.79e-17,3;CL:0000094,4.24e-11,8;CL:0000134,2.86e-10,354;CL:0002320,6.15e-10,361;CL:0000219,9.16e-09,386;CL:0000081,4.38e-08,11;CL:0000048,4.44e-08,427;CL:0000723,7.21e-08,433;CL:0000034,1.35e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-54;42!CL:0000049;6.85e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-16!102;UBERON:0003061!1.73e-16!102;UBERON:0002193!6.31e-16!112;UBERON:0002405!2.54e-14!115;UBERON:0002371!1.69e-13!80;UBERON:0001474!6.84e-12!86;UBERON:0004765!2.59e-09!101;UBERON:0001434!2.59e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.84e-40,76;UBERON:0001474,9.79e-37,82;UBERON:0002390,3.98e-35,98;UBERON:0003061,3.98e-35,98;UBERON:0004765,5.26e-33,90;UBERON:0002405,9.03e-32,93;UBERON:0002193,2.36e-31,108;UBERON:0001434,3.57e-29,100;UBERON:0002204,1.02e-16,167;UBERON:0003081,1.45e-16,203;UBERON:0002384,1.75e-09,371;UBERON:0000926,1.85e-08,315;UBERON:0004120,1.85e-08,315;UBERON:0006603,1.85e-08,315 | |||
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| |||
|short_description=p13@C15orf39 | |||
}} |
Revision as of 08:18, 11 September 2013
Short description: | p13@C15orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_C15orf39_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -2bp_to_ENST00000446981_5end |
EntrezGene: | C15orf39 |
HGNC: | 24497 |
UniProt: | F8WBD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.80e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.80e-72 | 42 |
defensive cell | 2.35e-62 | 48 |
phagocyte | 2.35e-62 | 48 |
myeloid leukocyte | 2.31e-58 | 72 |
monopoietic cell | 8.70e-49 | 59 |
monocyte | 8.70e-49 | 59 |
monoblast | 8.70e-49 | 59 |
promonocyte | 8.70e-49 | 59 |
macrophage dendritic cell progenitor | 4.91e-47 | 61 |
myeloid lineage restricted progenitor cell | 7.26e-47 | 66 |
granulocyte monocyte progenitor cell | 4.30e-46 | 67 |
myeloid cell | 5.06e-37 | 108 |
common myeloid progenitor | 5.06e-37 | 108 |
leukocyte | 2.69e-30 | 136 |
nongranular leukocyte | 1.32e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 2.08e-23 | 120 |
hematopoietic stem cell | 2.44e-23 | 168 |
hematopoietic oligopotent progenitor cell | 7.63e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.63e-23 | 161 |
hematopoietic cell | 7.84e-22 | 177 |
neutrophil | 1.79e-17 | 3 |
granulocyte | 4.24e-11 | 8 |
mesenchymal cell | 2.86e-10 | 354 |
connective tissue cell | 6.15e-10 | 361 |
motile cell | 9.16e-09 | 386 |
blood cell | 4.38e-08 | 11 |
multi fate stem cell | 4.44e-08 | 427 |
somatic stem cell | 7.21e-08 | 433 |
stem cell | 1.35e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.84e-40 | 76 |
bone element | 9.79e-37 | 82 |
hematopoietic system | 3.98e-35 | 98 |
blood island | 3.98e-35 | 98 |
skeletal element | 5.26e-33 | 90 |
immune system | 9.03e-32 | 93 |
hemolymphoid system | 2.36e-31 | 108 |
skeletal system | 3.57e-29 | 100 |
musculoskeletal system | 1.02e-16 | 167 |
lateral plate mesoderm | 1.45e-16 | 203 |
connective tissue | 1.75e-09 | 371 |
mesoderm | 1.85e-08 | 315 |
mesoderm-derived structure | 1.85e-08 | 315 |
presumptive mesoderm | 1.85e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.