FFCP PHASE1:Hg19::chr15:62353084..62353091,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54832|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23594|TSSclassifier=S|UniProt=|association_with_transcript=-412bp_to_ENST00000249837_5end|coexpression_cluster_id=C22|description=CAGE_peak_3_at_VPS13C_5end|id=chr15:62353084..62353091,-|ontology_enrichment_celltype=CL:0000738!2.85e-37!140;CL:0002087!5.28e-32!119;CL:0002031!6.51e-30!124;CL:0000037!8.20e-29!172;CL:0000566!8.20e-29!172;CL:0000838!2.05e-28!52;CL:0000542!1.02e-27!53;CL:0000051!1.02e-27!53;CL:0000988!2.19e-26!182;CL:0000791!4.70e-24!18;CL:0000789!4.70e-24!18;CL:0002420!4.70e-24!18;CL:0002419!4.70e-24!18;CL:0000790!4.70e-24!18;CL:0002032!6.01e-24!165;CL:0000837!6.01e-24!165;CL:0000084!3.05e-21!25;CL:0000827!3.05e-21!25;CL:0000624!1.51e-15!6;CL:0000625!8.34e-13!11;CL:0002057!1.00e-09!42;CL:0000766!2.74e-09!76;CL:0000860!8.09e-09!45;CL:0000623!1.58e-08!3;CL:0000825!1.58e-08!3;CL:0000898!1.87e-08!3;CL:0000842!7.05e-08!3;CL:0000767!1.22e-07!3;CL:0000134!1.99e-07!358;CL:0000557!3.12e-07!71;CL:0000236!3.93e-07!14;CL:0002320!4.96e-07!365|ontology_enrichment_celltype_v019=CL:0000624;9.88e-40;6!CL:0000791;3.96e-35;18!CL:0000789;3.96e-35;18!CL:0002419;3.96e-35;18!CL:0000084;7.14e-30;25!CL:0000623;1.49e-20;3!CL:0000898;2.44e-20;3!CL:0000542;4.77e-20;53!CL:0000815;6.62e-14;2!CL:0000792;6.62e-14;2!CL:0002677;6.62e-14;2!CL:0002393;5.60e-10;6!CL:0002397;5.60e-10;6!CL:0000625;9.29e-10;11!CL:0000895;3.55e-08;1!CL:0002087;5.66e-08;104|ontology_enrichment_celltype_v019_2=CL:0000624,1.21e-39,6;CL:0000791,4.04e-35,18;CL:0000789,4.04e-35,18;CL:0002420,4.04e-35,18;CL:0002419,4.04e-35,18;CL:0000790,4.04e-35,18;CL:0000838,7.15e-33,52;CL:0000542,3.46e-32,53;CL:0000051,3.46e-32,53;CL:0000084,7.56e-30,25;CL:0000827,7.56e-30,25;CL:0002087,1.31e-22,115;CL:0000623,1.76e-20,3;CL:0000825,1.76e-20,3;CL:0000898,2.78e-20,3;CL:0002031,2.09e-19,120;CL:0000738,1.78e-18,136;CL:0000037,3.76e-14,168;CL:0000815,7.55e-14,2;CL:0000792,7.55e-14,2;CL:0002677,7.55e-14,2;CL:0002032,1.97e-13,161;CL:0000837,1.97e-13,161;CL:0000988,3.25e-13,177;CL:0000625,8.78e-10,11;CL:0000810,3.55e-08,1;CL:0000895,3.55e-08,1;CL:0002436,3.55e-08,1;CL:0002427,3.55e-08,1;CL:0002428,3.55e-08,1;CL:0002429,3.55e-08,1;CL:0002433,3.55e-08,1;CL:0002431,3.55e-08,1;CL:0002432,3.55e-08,1;CL:0002393,9.28e-07,9;CL:0002397,9.28e-07,9|ontology_enrichment_development_v019=CL:0000790;3.96e-35;18!CL:0000051;4.77e-20;53!CL:0002427;3.55e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.30e-07!102;UBERON:0003061!4.30e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,2.21598163412751,1.00272223735071,2.17010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.918251677112708,0,0,0,0.199463657621632,0,0,0,1.86846674698672,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,2.27685187643779,3.52342313622563,2.6759125968766,0,1.68152568894461,0,12.1960057470577,13.3623659334716,7.40165396398233,0,3.58514493296949,4.2610302516126,5.84480185223734,0,3.24066498222321,0.664601683750863,2.43723477388514,0,0.130059347559878,0,0.276350017785848,0,4.59688345802387,10.4340922954988,6.27213142829861,0,8.04763036564035,4.12352934579156,3.79529538029254,0.318565414324097,0.651083453856419,0,1.35517607169996,0.127986611154418,0,0.473554504088034,0,7.66105624253983,3.7441627409691,13.4686695611003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31983052545203,4.09692392233083,5.39040752374943,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0|short_description=p3@VPS13C}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23594 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-412bp_to_ENST00000249837_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_3_at_VPS13C_5end | |||
|id=chr15:62353084..62353091,- | |||
|ontology_enrichment_celltype=CL:0000738!2.85e-37!140;CL:0002087!5.28e-32!119;CL:0002031!6.51e-30!124;CL:0000037!8.20e-29!172;CL:0000566!8.20e-29!172;CL:0000838!2.05e-28!52;CL:0000542!1.02e-27!53;CL:0000051!1.02e-27!53;CL:0000988!2.19e-26!182;CL:0000791!4.70e-24!18;CL:0000789!4.70e-24!18;CL:0002420!4.70e-24!18;CL:0002419!4.70e-24!18;CL:0000790!4.70e-24!18;CL:0002032!6.01e-24!165;CL:0000837!6.01e-24!165;CL:0000084!3.05e-21!25;CL:0000827!3.05e-21!25;CL:0000624!1.51e-15!6;CL:0000625!8.34e-13!11;CL:0002057!1.00e-09!42;CL:0000766!2.74e-09!76;CL:0000860!8.09e-09!45;CL:0000623!1.58e-08!3;CL:0000825!1.58e-08!3;CL:0000898!1.87e-08!3;CL:0000842!7.05e-08!3;CL:0000767!1.22e-07!3;CL:0000134!1.99e-07!358;CL:0000557!3.12e-07!71;CL:0000236!3.93e-07!14;CL:0002320!4.96e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000624;9.88e-40;6!CL:0000791;3.96e-35;18!CL:0000789;3.96e-35;18!CL:0002419;3.96e-35;18!CL:0000084;7.14e-30;25!CL:0000623;1.49e-20;3!CL:0000898;2.44e-20;3!CL:0000542;4.77e-20;53!CL:0000815;6.62e-14;2!CL:0000792;6.62e-14;2!CL:0002677;6.62e-14;2!CL:0002393;5.60e-10;6!CL:0002397;5.60e-10;6!CL:0000625;9.29e-10;11!CL:0000895;3.55e-08;1!CL:0002087;5.66e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.21e-39,6;CL:0000791,4.04e-35,18;CL:0000789,4.04e-35,18;CL:0002420,4.04e-35,18;CL:0002419,4.04e-35,18;CL:0000790,4.04e-35,18;CL:0000838,7.15e-33,52;CL:0000542,3.46e-32,53;CL:0000051,3.46e-32,53;CL:0000084,7.56e-30,25;CL:0000827,7.56e-30,25;CL:0002087,1.31e-22,115;CL:0000623,1.76e-20,3;CL:0000825,1.76e-20,3;CL:0000898,2.78e-20,3;CL:0002031,2.09e-19,120;CL:0000738,1.78e-18,136;CL:0000037,3.76e-14,168;CL:0000815,7.55e-14,2;CL:0000792,7.55e-14,2;CL:0002677,7.55e-14,2;CL:0002032,1.97e-13,161;CL:0000837,1.97e-13,161;CL:0000988,3.25e-13,177;CL:0000625,8.78e-10,11;CL:0000810,3.55e-08,1;CL:0000895,3.55e-08,1;CL:0002436,3.55e-08,1;CL:0002427,3.55e-08,1;CL:0002428,3.55e-08,1;CL:0002429,3.55e-08,1;CL:0002433,3.55e-08,1;CL:0002431,3.55e-08,1;CL:0002432,3.55e-08,1;CL:0002393,9.28e-07,9;CL:0002397,9.28e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;3.96e-35;18!CL:0000051;4.77e-20;53!CL:0002427;3.55e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-07!102;UBERON:0003061!4.30e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,2.21598163412751,1.00272223735071,2.17010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.918251677112708,0,0,0,0.199463657621632,0,0,0,1.86846674698672,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,2.27685187643779,3.52342313622563,2.6759125968766,0,1.68152568894461,0,12.1960057470577,13.3623659334716,7.40165396398233,0,3.58514493296949,4.2610302516126,5.84480185223734,0,3.24066498222321,0.664601683750863,2.43723477388514,0,0.130059347559878,0,0.276350017785848,0,4.59688345802387,10.4340922954988,6.27213142829861,0,8.04763036564035,4.12352934579156,3.79529538029254,0.318565414324097,0.651083453856419,0,1.35517607169996,0.127986611154418,0,0.473554504088034,0,7.66105624253983,3.7441627409691,13.4686695611003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31983052545203,4.09692392233083,5.39040752374943,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p3@VPS13C | |||
}} |
Revision as of 07:43, 11 September 2013
Short description: | p3@VPS13C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_VPS13C_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -412bp_to_ENST00000249837_5end |
EntrezGene: | VPS13C |
HGNC: | 23594 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.