FFCP PHASE1:Hg19::chr15:52043594..52043603,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=256586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28571|TSSclassifier=S|UniProt=|association_with_transcript=30bp_to_ENST00000558126_5end|coexpression_cluster_id=C78|description=CAGE_peak_13_at_LYSMD2_5end|id=chr15:52043594..52043603,-|ontology_enrichment_celltype=CL:0000945!6.01e-13!24;CL:0000826!6.01e-13!24;CL:0000838!6.04e-09!52;CL:0000542!9.49e-09!53;CL:0000051!9.49e-09!53;CL:0000167!7.97e-08!1;CL:0000164!7.97e-08!1;CL:0000502!7.97e-08!1;CL:0000172!7.97e-08!1;CL:0000173!7.97e-08!1;CL:0002351!7.97e-08!1;CL:0000946!1.11e-07!1;CL:0000786!1.11e-07!1;CL:0000980!1.11e-07!1|ontology_enrichment_celltype_v019=CL:0000945;1.33e-33;24!CL:0000542;5.01e-12;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.33e-33,24;CL:0000826,1.33e-33,24;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120|ontology_enrichment_development_v019=CL:0000051;5.01e-12;53|ontology_enrichment_disease=DOID:630!4.07e-08!1;DOID:0050177!4.07e-08!1;DOID:0050427!4.07e-08!1;DOID:4430!7.97e-08!1|ontology_enrichment_disease_v019=DOID:0060058;4.50e-45;10|ontology_enrichment_disease_v019_2=DOID:0060058,4.85e-45,10;DOID:2531,1.21e-09,51;DOID:0060083,1.21e-09,51|ontology_enrichment_uberon=UBERON:0000007!1.54e-14!2;UBERON:0002780!1.47e-08!41;UBERON:0001890!1.47e-08!41;UBERON:0006240!1.47e-08!41;UBERON:0003080!2.47e-08!42;UBERON:0007023!4.39e-08!115;UBERON:0001154!6.10e-08!1;UBERON:0001153!6.10e-08!1;UBERON:0001874!8.51e-08!1;UBERON:0002372!1.04e-07!1;UBERON:0001961!1.04e-07!1;UBERON:0001744!1.04e-07!1;UBERON:0001735!1.04e-07!1;UBERON:0003296!1.08e-07!4;UBERON:0010133!1.08e-07!4;UBERON:0007190!1.75e-07!1;UBERON:0002336!1.87e-07!1;UBERON:0001018!1.87e-07!1;UBERON:0002473!1.87e-07!1;UBERON:0005340!1.87e-07!1;UBERON:0002316!1.87e-07!1;UBERON:0003544!1.87e-07!1;UBERON:0001020!1.87e-07!1;UBERON:0005970!1.87e-07!1;UBERON:0002437!1.87e-07!1;UBERON:0001882!1.99e-07!1;UBERON:0005403!1.99e-07!1;UBERON:0000369!3.33e-07!4;UBERON:0002435!3.33e-07!4;UBERON:0000204!3.33e-07!4;UBERON:0010082!3.33e-07!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40148321798935,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49982267370988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.301925687133347,0,0,0.940634592723046,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466|short_description=p13@LYSMD2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=256586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28571 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000558126_5end | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_13_at_LYSMD2_5end | |||
|id=chr15:52043594..52043603,- | |||
|ontology_enrichment_celltype=CL:0000945!6.01e-13!24;CL:0000826!6.01e-13!24;CL:0000838!6.04e-09!52;CL:0000542!9.49e-09!53;CL:0000051!9.49e-09!53;CL:0000167!7.97e-08!1;CL:0000164!7.97e-08!1;CL:0000502!7.97e-08!1;CL:0000172!7.97e-08!1;CL:0000173!7.97e-08!1;CL:0002351!7.97e-08!1;CL:0000946!1.11e-07!1;CL:0000786!1.11e-07!1;CL:0000980!1.11e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.33e-33;24!CL:0000542;5.01e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.33e-33,24;CL:0000826,1.33e-33,24;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;5.01e-12;53 | |||
|ontology_enrichment_disease=DOID:630!4.07e-08!1;DOID:0050177!4.07e-08!1;DOID:0050427!4.07e-08!1;DOID:4430!7.97e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.50e-45;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.85e-45,10;DOID:2531,1.21e-09,51;DOID:0060083,1.21e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.54e-14!2;UBERON:0002780!1.47e-08!41;UBERON:0001890!1.47e-08!41;UBERON:0006240!1.47e-08!41;UBERON:0003080!2.47e-08!42;UBERON:0007023!4.39e-08!115;UBERON:0001154!6.10e-08!1;UBERON:0001153!6.10e-08!1;UBERON:0001874!8.51e-08!1;UBERON:0002372!1.04e-07!1;UBERON:0001961!1.04e-07!1;UBERON:0001744!1.04e-07!1;UBERON:0001735!1.04e-07!1;UBERON:0003296!1.08e-07!4;UBERON:0010133!1.08e-07!4;UBERON:0007190!1.75e-07!1;UBERON:0002336!1.87e-07!1;UBERON:0001018!1.87e-07!1;UBERON:0002473!1.87e-07!1;UBERON:0005340!1.87e-07!1;UBERON:0002316!1.87e-07!1;UBERON:0003544!1.87e-07!1;UBERON:0001020!1.87e-07!1;UBERON:0005970!1.87e-07!1;UBERON:0002437!1.87e-07!1;UBERON:0001882!1.99e-07!1;UBERON:0005403!1.99e-07!1;UBERON:0000369!3.33e-07!4;UBERON:0002435!3.33e-07!4;UBERON:0000204!3.33e-07!4;UBERON:0010082!3.33e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40148321798935,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49982267370988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.301925687133347,0,0,0.940634592723046,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p13@LYSMD2 | |||
}} |
Revision as of 07:24, 11 September 2013
Short description: | p13@LYSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_LYSMD2_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 30bp_to_ENST00000558126_5end |
EntrezGene: | LYSMD2 |
HGNC: | 28571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.33e-33 | 24 |
pro-B cell | 1.33e-33 | 24 |
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.85e-45 | 10 |
hematologic cancer | 1.21e-09 | 51 |
immune system cancer | 1.21e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.