FFCP PHASE1:Hg19::chr15:40544822..40544871,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56924|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16061|TSSclassifier=S|UniProt=|association_with_transcript=70bp_to_ENST00000560684_5end|description=CAGE_peak_1_at_PAK6_5end|id=chr15:40544822..40544871,+|ontology_enrichment_celltype=CL:0000066!2.20e-09!254;CL:0002076!8.36e-08!43|ontology_enrichment_celltype_v019=CL:0002076;5.81e-08;42!CL:1000507;6.05e-07;10!CL:1000494;6.05e-07;10!CL:0000039;9.45e-07;7!CL:0000586;9.45e-07;7|ontology_enrichment_celltype_v019_2=CL:0000066,6.12e-13,253;CL:0002076,2.01e-09,42;CL:1000507,5.44e-07,10;CL:1000494,5.44e-07,10;CL:0000039,6.79e-07,7;CL:0000586,6.79e-07,7;CL:1000449,9.12e-07,15;CL:0000223,9.97e-07,58|ontology_enrichment_development_v019=UBERON:0009117;2.48e-07;10!UBERON:0005564;2.48e-07;10|ontology_enrichment_disease=DOID:305!7.82e-09!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,7.04e-15,106;DOID:0050687,2.06e-10,143|ontology_enrichment_uberon=UBERON:0007023!2.38e-24!115;UBERON:0000064!3.36e-12!219;UBERON:0000464!3.19e-11!104;UBERON:0004119!3.27e-10!169;UBERON:0000925!3.27e-10!169;UBERON:0006595!3.27e-10!169;UBERON:0000466!3.23e-09!126;UBERON:0001007!1.49e-08!155;UBERON:0001555!1.49e-08!155;UBERON:0007026!1.49e-08!155;UBERON:0000058!2.48e-08!26;UBERON:0004921!9.44e-08!129;UBERON:0004185!9.44e-08!129;UBERON:0005911!1.29e-07!82;UBERON:0002780!2.79e-07!41;UBERON:0001890!2.79e-07!41;UBERON:0006240!2.79e-07!41;UBERON:0003064!3.07e-07!37;UBERON:0000481!4.06e-07!347;UBERON:0000080!4.37e-07!18;UBERON:0002120!4.37e-07!18;UBERON:0004875!4.37e-07!18;UBERON:0005721!4.37e-07!18;UBERON:0005754!4.37e-07!18;UBERON:0007297!4.37e-07!18;UBERON:0005178!5.09e-07!34;UBERON:0002224!5.09e-07!34;UBERON:0005177!5.96e-07!107;UBERON:0003080!6.59e-07!42;UBERON:0001008!7.72e-07!45;UBERON:0000062!9.48e-07!511|ontology_enrichment_uberon_v019=UBERON:0003101;1.32e-08;22!UBERON:0000079;1.32e-08;22!UBERON:0003135;1.44e-08;11!UBERON:0005178;4.44e-08;34!UBERON:0002224;4.44e-08;34!UBERON:0000473;8.99e-08;8!UBERON:0005181;3.52e-07;35!UBERON:0002048;3.67e-07;22!UBERON:0000117;3.67e-07;22!UBERON:0000171;3.67e-07;22!UBERON:0000170;3.67e-07;22!UBERON:0004807;4.93e-07;22!UBERON:0002294;5.86e-07;7!UBERON:0001173;5.86e-07;7!UBERON:0004211;6.05e-07;10!UBERON:0009773;6.05e-07;10!UBERON:0001231;6.05e-07;10!UBERON:0004810;6.05e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.55e-12,114;UBERON:0004119,1.67e-11,160;UBERON:0000925,1.67e-11,160;UBERON:0006595,1.67e-11,160;UBERON:0001007,1.72e-11,145;UBERON:0001555,1.72e-11,145;UBERON:0007026,1.72e-11,145;UBERON:0005177,7.26e-11,101;UBERON:0004921,5.15e-10,118;UBERON:0005178,4.05e-09,34;UBERON:0002224,4.05e-09,34;UBERON:0001008,6.98e-09,48;UBERON:0005181,1.04e-08,35;UBERON:0003135,1.14e-08,11;UBERON:0003101,1.17e-08,22;UBERON:0000079,1.17e-08,22;UBERON:0005157,1.49e-08,47;UBERON:0005911,1.76e-08,82;UBERON:0006554,2.73e-08,47;UBERON:0000473,6.12e-08,8;UBERON:0005153,7.07e-08,37;UBERON:0003103,1.34e-07,68;UBERON:0006555,1.90e-07,16;UBERON:0004819,1.90e-07,16;UBERON:0009569,2.27e-07,112;UBERON:0005156,2.58e-07,59;UBERON:0000990,2.58e-07,59;UBERON:0002048,3.01e-07,22;UBERON:0000117,3.01e-07,22;UBERON:0000171,3.01e-07,22;UBERON:0000170,3.01e-07,22;UBERON:0005597,3.01e-07,22;UBERON:0000118,3.01e-07,22;UBERON:0004810,5.44e-07,10;UBERON:0004211,9.12e-07,15;UBERON:0009773,9.12e-07,15;UBERON:0001231,9.12e-07,15;UBERON:0001285,9.12e-07,15;UBERON:0007684,9.12e-07,15;UBERON:0004208,9.12e-07,15;UBERON:0002294,9.89e-07,9;UBERON:0001173,9.89e-07,9;UBERON:0004912,9.89e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,11.8626198555313,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,2.75826367343678,2.10844143144775,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.602300476311091,0.76791966692651,0,0.710331756132051,2.46338399076314,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,2.29213382120997,5.46442932438813,4.82019775619758,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.36373060295417,2.00763216772303,1.34171076742555,1.85541675650079,1.62671520017326,2.17688215532278,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,5.28850285735388,0,0.109750285408626,0,0.703702806881416,0.740707561268237,0,0,0,0,0.117408694235822,0.144366447761074,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863,0,5.85553856159117,8.89315631416165,3.48346796635138,1.71116650542641,3.97377112786066,2.58199939413635,0.99798106963804,8.87295627859622,0.106727345877715,0,0.808426818959282,2.34640942403454,0.611207220914332,1.22068853494722,1.99727032255654,1.00636896795513,0|short_description=p1@PAK6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56924 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=70bp_to_ENST00000560684_5end | |||
|description=CAGE_peak_1_at_PAK6_5end | |||
|id=chr15:40544822..40544871,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.20e-09!254;CL:0002076!8.36e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.81e-08;42!CL:1000507;6.05e-07;10!CL:1000494;6.05e-07;10!CL:0000039;9.45e-07;7!CL:0000586;9.45e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.12e-13,253;CL:0002076,2.01e-09,42;CL:1000507,5.44e-07,10;CL:1000494,5.44e-07,10;CL:0000039,6.79e-07,7;CL:0000586,6.79e-07,7;CL:1000449,9.12e-07,15;CL:0000223,9.97e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.48e-07;10!UBERON:0005564;2.48e-07;10 | |||
|ontology_enrichment_disease=DOID:305!7.82e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.04e-15,106;DOID:0050687,2.06e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-24!115;UBERON:0000064!3.36e-12!219;UBERON:0000464!3.19e-11!104;UBERON:0004119!3.27e-10!169;UBERON:0000925!3.27e-10!169;UBERON:0006595!3.27e-10!169;UBERON:0000466!3.23e-09!126;UBERON:0001007!1.49e-08!155;UBERON:0001555!1.49e-08!155;UBERON:0007026!1.49e-08!155;UBERON:0000058!2.48e-08!26;UBERON:0004921!9.44e-08!129;UBERON:0004185!9.44e-08!129;UBERON:0005911!1.29e-07!82;UBERON:0002780!2.79e-07!41;UBERON:0001890!2.79e-07!41;UBERON:0006240!2.79e-07!41;UBERON:0003064!3.07e-07!37;UBERON:0000481!4.06e-07!347;UBERON:0000080!4.37e-07!18;UBERON:0002120!4.37e-07!18;UBERON:0004875!4.37e-07!18;UBERON:0005721!4.37e-07!18;UBERON:0005754!4.37e-07!18;UBERON:0007297!4.37e-07!18;UBERON:0005178!5.09e-07!34;UBERON:0002224!5.09e-07!34;UBERON:0005177!5.96e-07!107;UBERON:0003080!6.59e-07!42;UBERON:0001008!7.72e-07!45;UBERON:0000062!9.48e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;1.32e-08;22!UBERON:0000079;1.32e-08;22!UBERON:0003135;1.44e-08;11!UBERON:0005178;4.44e-08;34!UBERON:0002224;4.44e-08;34!UBERON:0000473;8.99e-08;8!UBERON:0005181;3.52e-07;35!UBERON:0002048;3.67e-07;22!UBERON:0000117;3.67e-07;22!UBERON:0000171;3.67e-07;22!UBERON:0000170;3.67e-07;22!UBERON:0004807;4.93e-07;22!UBERON:0002294;5.86e-07;7!UBERON:0001173;5.86e-07;7!UBERON:0004211;6.05e-07;10!UBERON:0009773;6.05e-07;10!UBERON:0001231;6.05e-07;10!UBERON:0004810;6.05e-07;10 | |||
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| |||
|short_description=p1@PAK6 | |||
}} |
Revision as of 06:54, 11 September 2013
Short description: | p1@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000560684_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.12e-13 | 253 |
endo-epithelial cell | 2.01e-09 | 42 |
kidney tubule cell | 5.44e-07 | 10 |
nephron tubule epithelial cell | 5.44e-07 | 10 |
germ line cell | 6.79e-07 | 7 |
germ cell | 6.79e-07 | 7 |
epithelial cell of nephron | 9.12e-07 | 15 |
endodermal cell | 9.97e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.04e-15 | 106 |
cell type cancer | 2.06e-10 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.