FFCP PHASE1:Hg19::chr15:39886495..39886505,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11785|TSSclassifier=N|UniProt=|association_with_transcript=226bp_to_ENST00000559746_5end|coexpression_cluster_id=C142|description=CAGE_peak_39_at_THBS1_5end|id=chr15:39886495..39886505,+|ontology_enrichment_celltype=CL:0002139!1.49e-10!24;CL:0000057!2.33e-10!75;CL:0000115!4.89e-08!35;CL:0000055!9.83e-08!180;CL:0002371!5.80e-07!591|ontology_enrichment_celltype_v019=CL:0002580;1.33e-11;3!CL:0002139;8.82e-10;24!CL:0000197;1.18e-09;6!CL:0000098;1.18e-09;6!CL:0002167;1.18e-09;6!CL:0002544;2.43e-09;6!CL:1000413;2.75e-09;9!CL:0002138;4.12e-09;6!CL:0002617;3.27e-08;2!CL:0002545;1.19e-07;2!CL:0002334;1.92e-07;12!CL:0000115;3.02e-07;36|ontology_enrichment_celltype_v019_2=CL:0002580,1.01e-11,3;CL:0000197,8.10e-10,6;CL:0000098,8.10e-10,6;CL:0002167,8.10e-10,6;CL:0002139,1.22e-09,24;CL:0000057,3.22e-09,76;CL:0002544,3.64e-09,6;CL:0005020,4.15e-09,6;CL:0002138,4.15e-09,6;CL:0005022,4.15e-09,6;CL:1000413,4.54e-09,9;CL:0002617,5.59e-08,2;CL:0002545,1.37e-07,2;CL:0002334,1.77e-07,12;CL:0000115,1.94e-07,36|ontology_enrichment_development_v019=CL:0005022;4.12e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!6.78e-13!69;UBERON:0002049!1.98e-11!79;UBERON:0007798!1.98e-11!79;UBERON:0001981!7.95e-11!60;UBERON:0007500!7.95e-11!60;UBERON:0004537!7.95e-11!60;UBERON:0006965!7.95e-11!60;UBERON:0004872!8.52e-11!84;UBERON:0001637!6.02e-09!42;UBERON:0003509!6.02e-09!42;UBERON:0004572!6.02e-09!42;UBERON:0004535!3.05e-08!110;UBERON:0001009!4.41e-08!113;UBERON:0000467!4.83e-08!625;UBERON:0000468!4.93e-08!659;UBERON:0000480!6.01e-08!626;UBERON:0003914!9.83e-08!118;UBERON:0000487!7.70e-07!22|ontology_enrichment_uberon_v019=UBERON:0003688;1.18e-09;6!UBERON:0002358;1.18e-09;6!UBERON:0003684;1.18e-09;6!UBERON:0001178;1.18e-09;6!UBERON:0003915;2.75e-09;9!UBERON:0004700;2.75e-09;9!UBERON:0001917;2.75e-09;9!UBERON:0000310;7.13e-09;10!UBERON:0001443;4.95e-08;11!UBERON:0005800;1.19e-07;2!UBERON:0001515;1.19e-07;2!UBERON:0001473;7.63e-07;8!UBERON:0004536;7.63e-07;8!UBERON:0006558;7.63e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.29e-09,6;UBERON:0002358,2.29e-09,6;UBERON:0003684,2.29e-09,6;UBERON:0001178,2.29e-09,6;UBERON:0003915,4.54e-09,9;UBERON:0004700,4.54e-09,9;UBERON:0001917,4.54e-09,9;UBERON:0000310,8.08e-09,10;UBERON:0001443,5.53e-08,11;UBERON:0005800,1.37e-07,2;UBERON:0001515,1.37e-07,2;UBERON:0001473,7.67e-07,8;UBERON:0004536,7.67e-07,8;UBERON:0006558,7.67e-07,8|phase1_expression=1.09007027562334,4.06790995392868,1.26858963686374,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0.491467873003018,0,0.655324116390517,0.791300934685361,0,0,1.34465029290355,1.80808358407193,0,0.487932798790507,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,1.80490002723128,0.217010870715852,0,0,0,0.436194716338694,0,0,0.464858073811369,0,0,1.43846196161075,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.918251677112708,0.320929027076094,0,0,0.199463657621632,0,2.90209238628584,0,0,0.251248665256743,0,0,1.81619850790011,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0.50133791063589,0.144846518960824,0,1.45990461090791,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,2.82653970962005,1.25849830862972,0.550236083880135,0.835979866147242,0.258416759169329,1.06729878806013,1.67360306382335,0,0,0.24406205754817,1.10298924103761,1.62028389576352,0.892997282840798,0.673588117878509,0.788280363383256,0,0,0.916008719652036,0,0,0,2.48485975847659,0.379891534993739,0.794455084879313,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,3.95627086845691,0,0,0,0,0,0.438977620880838,1.5324389789951,1.80285670687916,0.340296549480063,1.25572744982203,1.49490172172997,1.05965950579781,0.600182192168805,0.618315175430633,0.515281080091258,2.04728541964749,0.675105328965065,0,0.757301322732344,0.736399189138395,0.484938170456436,1.77504796258307,0.503760491138201,0.847802961552438,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,0.288732895522148,1.85194205030644,1.14152491340759,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.268675568108545,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.45579603071565,3.3901507871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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=226bp_to_ENST00000559746_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_39_at_THBS1_5end | |||
|id=chr15:39886495..39886505,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.49e-10!24;CL:0000057!2.33e-10!75;CL:0000115!4.89e-08!35;CL:0000055!9.83e-08!180;CL:0002371!5.80e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.33e-11;3!CL:0002139;8.82e-10;24!CL:0000197;1.18e-09;6!CL:0000098;1.18e-09;6!CL:0002167;1.18e-09;6!CL:0002544;2.43e-09;6!CL:1000413;2.75e-09;9!CL:0002138;4.12e-09;6!CL:0002617;3.27e-08;2!CL:0002545;1.19e-07;2!CL:0002334;1.92e-07;12!CL:0000115;3.02e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.01e-11,3;CL:0000197,8.10e-10,6;CL:0000098,8.10e-10,6;CL:0002167,8.10e-10,6;CL:0002139,1.22e-09,24;CL:0000057,3.22e-09,76;CL:0002544,3.64e-09,6;CL:0005020,4.15e-09,6;CL:0002138,4.15e-09,6;CL:0005022,4.15e-09,6;CL:1000413,4.54e-09,9;CL:0002617,5.59e-08,2;CL:0002545,1.37e-07,2;CL:0002334,1.77e-07,12;CL:0000115,1.94e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;4.12e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.78e-13!69;UBERON:0002049!1.98e-11!79;UBERON:0007798!1.98e-11!79;UBERON:0001981!7.95e-11!60;UBERON:0007500!7.95e-11!60;UBERON:0004537!7.95e-11!60;UBERON:0006965!7.95e-11!60;UBERON:0004872!8.52e-11!84;UBERON:0001637!6.02e-09!42;UBERON:0003509!6.02e-09!42;UBERON:0004572!6.02e-09!42;UBERON:0004535!3.05e-08!110;UBERON:0001009!4.41e-08!113;UBERON:0000467!4.83e-08!625;UBERON:0000468!4.93e-08!659;UBERON:0000480!6.01e-08!626;UBERON:0003914!9.83e-08!118;UBERON:0000487!7.70e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.18e-09;6!UBERON:0002358;1.18e-09;6!UBERON:0003684;1.18e-09;6!UBERON:0001178;1.18e-09;6!UBERON:0003915;2.75e-09;9!UBERON:0004700;2.75e-09;9!UBERON:0001917;2.75e-09;9!UBERON:0000310;7.13e-09;10!UBERON:0001443;4.95e-08;11!UBERON:0005800;1.19e-07;2!UBERON:0001515;1.19e-07;2!UBERON:0001473;7.63e-07;8!UBERON:0004536;7.63e-07;8!UBERON:0006558;7.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.29e-09,6;UBERON:0002358,2.29e-09,6;UBERON:0003684,2.29e-09,6;UBERON:0001178,2.29e-09,6;UBERON:0003915,4.54e-09,9;UBERON:0004700,4.54e-09,9;UBERON:0001917,4.54e-09,9;UBERON:0000310,8.08e-09,10;UBERON:0001443,5.53e-08,11;UBERON:0005800,1.37e-07,2;UBERON:0001515,1.37e-07,2;UBERON:0001473,7.67e-07,8;UBERON:0004536,7.67e-07,8;UBERON:0006558,7.67e-07,8 | |||
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| |||
|short_description=p39@THBS1 | |||
}} |
Revision as of 06:51, 11 September 2013
Short description: | p39@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_39_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 226bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.01e-11 | 3 |
receptor cell | 8.10e-10 | 6 |
sensory epithelial cell | 8.10e-10 | 6 |
olfactory epithelial cell | 8.10e-10 | 6 |
endothelial cell of vascular tree | 1.22e-09 | 24 |
fibroblast | 3.22e-09 | 76 |
aortic endothelial cell | 3.64e-09 | 6 |
lymphangioblast | 4.15e-09 | 6 |
endothelial cell of lymphatic vessel | 4.15e-09 | 6 |
vascular lymphangioblast | 4.15e-09 | 6 |
endothelial cell of artery | 4.54e-09 | 9 |
adipocyte of breast | 5.59e-08 | 2 |
thoracic aorta endothelial cell | 1.37e-07 | 2 |
preadipocyte | 1.77e-07 | 12 |
endothelial cell | 1.94e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.29e-09 | 6 |
peritoneum | 2.29e-09 | 6 |
abdominal cavity | 2.29e-09 | 6 |
visceral peritoneum | 2.29e-09 | 6 |
endothelial tube | 4.54e-09 | 9 |
arterial system endothelium | 4.54e-09 | 9 |
endothelium of artery | 4.54e-09 | 9 |
breast | 8.08e-09 | 10 |
chest | 5.53e-08 | 11 |
segment of aorta | 1.37e-07 | 2 |
thoracic aorta | 1.37e-07 | 2 |
lymphatic vessel | 7.67e-07 | 8 |
lymph vasculature | 7.67e-07 | 8 |
lymphatic part of lymphoid system | 7.67e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.