FFCP PHASE1:Hg19::chr15:101142401..101142420,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55180|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30922|TSSclassifier=S|UniProt=Q8NG48|association_with_transcript=0bp_to_uc002bwe.2,uc002bwf.2,uc002bwg.2,uc002bwh.2,uc002bwi.2,uc010usa.1_5end|description=CAGE_peak_2_at_LINS_5end|id=chr15:101142401..101142420,-|ontology_enrichment_celltype=CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000791!1.54e-07!18;CL:0000789!1.54e-07!18;CL:0002420!1.54e-07!18;CL:0002419!1.54e-07!18;CL:0000790!1.54e-07!18|ontology_enrichment_celltype_v019=CL:0000791;6.74e-10;18!CL:0000789;6.74e-10;18!CL:0002419;6.74e-10;18!CL:0000084;1.21e-08;25!CL:0000625;2.37e-07;11|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-10,18;CL:0000789,5.31e-10,18;CL:0002420,5.31e-10,18;CL:0002419,5.31e-10,18;CL:0000790,5.31e-10,18;CL:0000084,1.74e-08,25;CL:0000827,1.74e-08,25;CL:0000625,1.70e-07,11|ontology_enrichment_development_v019=CL:0000790;6.74e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.363356758541113,0.428201047781966,0.845726424575827,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0,0.737201809504527,0,0.218441372130172,1.05506791291381,0.37129905888014,0,0.672325146451775,0,0,0,0.369363174230364,0,0,0.572471974262113,0.684372125364421,0.502170558379211,1.06978768047132,0.821005894499457,0.787107813136792,0.786728553697808,0.383829398097213,0.154816123316076,0,0,1.47901604066715,0.542270404062111,1.70603078984906,0.293600439334847,1.10799081706375,0.401088894940283,0.868043482863407,1.34349284543955,0.647787332037959,1.03030227053675,0.581592955118259,0,0.242584061187816,0,0.411167888021826,0.929119112685311,0.575384784644301,1.0246428261164,0.47296445977717,0.689491361473237,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0.989553900560148,0.598390972864896,1.27867425159808,0,0,0,1.50749199154046,0.521482918420201,1.3031330682307,0.605399502633369,0,0.632924774881769,0.422510572623884,0.850417199860174,0.209658645508376,0.561643155732475,0.750884464207532,0.48217676009124,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0.889509253863555,0,1.60158394814405,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,1.96709770113833,1.17903228824749,1.02800749499755,1.5046784585161,0.977766799900771,2.36723902867367,5.84480185223734,1.22551502573691,2.06224135232386,0.443067789167242,2.16643091012012,0.896639238079726,1.69077151827842,1.47994114143309,0.552700035571697,2.89803085735052,5.48660283699624,4.81573490561484,5.22677619024884,1.35971211237079,1.91610246800961,2.40539211837841,3.28925599625354,1.27426165729639,1.95325036156926,2.85135613334512,2.40920190524436,2.43174561193395,3.74792179657038,1.18388626022008,1.64225599384209,1.00803371612366,0.534880391567015,1.59306844271079,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,1.5905718941022,0,0.661743720148475,0.443458794925128,0.790513071238134,1.24430121722827,0.364295288292542,0.370784442784429,0.97364218096405,0.696518949197069,0.132957960518865,0.238490624305342,0.571994910780128,0,0.79504962946682,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0,0,0.760272105718513,0.24406205754817,1.10298924103761,0,0.714397826272638,0,0.337834441449967,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.633152558322899,1.58891016975863,2.0078563452417,1.06400514659507,0,0,0.49333509683432,0.933633106199299,0.942974704487816,1.47115712802113,0.605429710579726,0.576175924479999,0.468642863667593,0.624320153660641,0,0.149448680551801,0.822041490506354,0,0.561803226808994,1.02077085627447,0.122834317311768,0.516628905878827,0,0,0,0,0.336672227908132,0.500474079487857,0.277064115484183,0.877955241761676,0.30648779579902,0.300476117813194,0.340296549480063,1.79389635688862,0.85422955527427,0.847727604638247,2.40072876867522,0.412210116953756,1.03056216018252,0.558350568994769,2.70042131586026,0.584622030967192,1.51460264546469,0.552299391853796,0.484938170456436,2.4850671476163,0.403008392910561,0.169560592310488,0.57978255948989,0.818238361772504,0.286804595389004,0.365921118388786,0.397589304964456,0.580969714347592,0.207322110030741,0.504641701751257,0.36497735907583,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0.946454400318751,1.51726221070292,0.964044119533928,1.43382164552112,0.653638332277218,1.18635309555548,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0.614942192715568,0.171567810298526,0.219500570817251,0,0.502644862058154,0.277765335475589,0,0,0,0.579652024875384,0.469634776943287,0.288732895522148,0.462985512576611,0.570762456703795,1.58040879591855,0,0.492434012174795,1.17002132569619,0.445893486866185,2.81201501960331,0.335964256397719,0.708875486211932,1.61205340865127,1.45316969256981,0,1.9706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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55180 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30922 | |||
|TSSclassifier=S | |||
|UniProt=Q8NG48 | |||
|association_with_transcript=0bp_to_uc002bwe.2,uc002bwf.2,uc002bwg.2,uc002bwh.2,uc002bwi.2,uc010usa.1_5end | |||
|description=CAGE_peak_2_at_LINS_5end | |||
|id=chr15:101142401..101142420,- | |||
|ontology_enrichment_celltype=CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000791!1.54e-07!18;CL:0000789!1.54e-07!18;CL:0002420!1.54e-07!18;CL:0002419!1.54e-07!18;CL:0000790!1.54e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.74e-10;18!CL:0000789;6.74e-10;18!CL:0002419;6.74e-10;18!CL:0000084;1.21e-08;25!CL:0000625;2.37e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-10,18;CL:0000789,5.31e-10,18;CL:0002420,5.31e-10,18;CL:0002419,5.31e-10,18;CL:0000790,5.31e-10,18;CL:0000084,1.74e-08,25;CL:0000827,1.74e-08,25;CL:0000625,1.70e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.74e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@LINS | |||
}} |
Revision as of 06:18, 11 September 2013
Short description: | p2@LINS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LINS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002bwe.2, uc002bwf.2, uc002bwg.2, uc002bwh.2, uc002bwi.2, uc010usa.1_5end |
EntrezGene: | LINS |
HGNC: | 30922 |
UniProt: | Q8NG48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.31e-10 | 18 |
alpha-beta T cell | 5.31e-10 | 18 |
immature T cell | 5.31e-10 | 18 |
mature T cell | 5.31e-10 | 18 |
immature alpha-beta T cell | 5.31e-10 | 18 |
T cell | 1.74e-08 | 25 |
pro-T cell | 1.74e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.70e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.