FFCP PHASE1:Hg19::chr14:80678512..80678529,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2884|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000553968,uc010tvq.1,uc010tvr.1_5end|coexpression_cluster_id=C30|description=CAGE_peak_1_at_DIO2_5end|id=chr14:80678512..80678529,-|ontology_enrichment_celltype=CL:0000055!1.12e-09!180;CL:0000192!1.67e-09!42;CL:0000514!1.67e-09!42;CL:0000359!4.23e-08!32;CL:0000680!5.17e-07!57;CL:0000056!5.17e-07!57;CL:0000355!5.17e-07!57;CL:0000187!6.15e-07!54|ontology_enrichment_celltype_v019=CL:0000192;7.35e-08;43|ontology_enrichment_celltype_v019_2=CL:0000192,6.62e-09,43;CL:0000514,6.62e-09,43|ontology_enrichment_development_v019=CL:0000514;7.35e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!6.30e-14!347;UBERON:0000475!1.71e-12!365;UBERON:0000477!7.34e-11!286;UBERON:0003075!5.37e-08!86;UBERON:0007284!5.37e-08!86;UBERON:0000468!1.17e-07!659;UBERON:0007023!1.17e-07!115;UBERON:0002385!2.82e-07!63;UBERON:0001015!2.82e-07!63;UBERON:0000383!2.82e-07!63;UBERON:0001134!2.87e-07!61;UBERON:0002036!2.87e-07!61;UBERON:0003082!2.87e-07!61;UBERON:0002346!3.11e-07!90;UBERON:0000064!3.99e-07!219;UBERON:0004111!6.35e-07!241;UBERON:0000062!6.73e-07!511;UBERON:0000483!8.30e-07!309;UBERON:0007625!8.69e-07!11;UBERON:0004573!9.62e-07!33;UBERON:0004571!9.62e-07!33|ontology_enrichment_uberon_v019=UBERON:0001737;4.05e-08;9!UBERON:0001557;4.05e-08;9!UBERON:0007625;4.35e-08;11!UBERON:0000020;6.44e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.04e-08,9;UBERON:0007625,4.55e-08,11|phase1_expression=0.54503513781167,2.14100523890983,1.9733616573436,25.0183245882826,4.46961094427288,6.97870819280295,0,0,0,1.72013755551056,0.697801167972428,0,0,19.8026164736075,25.5175979310495,0.672325146451775,0.602694528023977,2.19093027116212,0.487932798790507,0.246242116153576,0.204000691244253,0,1.43117993565528,4.51685602740518,0.376627918784408,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,1.80719576192283,4.51204119572301,9.70471677037519,0,0.973269740605272,3.97046232089085,18.8469987843179,41.4580188471555,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39293562831038,1.98613771219828,1.43418310374407,0.709336764396714,2.24271040056923,1.06748995729705,2.4666754841716,1.55605517699883,6.7355336034844,0.653847612453835,1.05950199351452,2.30470369792,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,1.34323515528495,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.340296549480063,47.1794741861707,8.11518077510556,15.8948925869671,43.5132089322383,27.5150253066632,59.2573242104947,25.1257756047646,0,2.43592512902997,21.2044370365056,7.64014158731085,1.2931684545505,21.6555851435135,15.5158231270566,30.8600278005087,0,0,0,0,0.132529768321485,1.04574548582567,1.0366105501537,0.252320850875628,0,3.12899064659632,4.5026865673502,0,28.7908115379827,2.88751792667834,8.99131680302814,8.26064981382698,12.0505514941741,9.0441057640563,8.71517776369625,9.49082476444386,12.1348177344148,12.1657308377715,11.9271618653381,0,0,0,0,0,0,0,0,0,26.2498749756744,0.109750285408626,0,0,0,0,0,31.7528952455601,0.231860809950154,13.6194085313553,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0.87192013766656,0,1.55126058909333,0,0,11.7012771297343,8.32059495290929,0,0,0,122.389162571374,2.71310802695722,0,0,56.5073198500648,0,0.602878754119172,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,27.8509686202448,7.50255781589516,1.08506009479894,2.49565033836969,0.535286966391485,0.946214490203608,1.99140405487612,0,0,0,0.664225598535437,0.553107505625109,1.65078867489357,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.460385919864187,0.841980283299221,0.640695746278505,22.515118958935,2.2519548960105,1.48418066444991,0.308419387605311,1.59805552781814,0.574890092096664,29.5975024634664,0.581051892299796,0,0,0,29.6221276264685,66.281185154445,24.2580167674935,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,2.56450125116389,141.702326942273,89.4790585326833,4.84292754744295,1.19040304263846,1.07262349896764,0,0,0,0,0.770243085573222,0.307007349452259,0,0,0,0.170453254832202,0.178064071293475,0,0,0,0,1.39453664789186,3.77774816196768,0.6970372701606,4.00443654228915,4.7907542728532,3.47973196830029,1.48259375283136,41.0768424949515,0,0.316379424718726,1.71567174531442,0,3.42351190427136,43.2756417179274,1.56989728039846,0.359744915166629,2.74537029736055,1.64937363283961,5.25674452090622,44.3828899284423,0.421258456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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2884 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000553968,uc010tvq.1,uc010tvr.1_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_1_at_DIO2_5end | |||
|id=chr14:80678512..80678529,- | |||
|ontology_enrichment_celltype=CL:0000055!1.12e-09!180;CL:0000192!1.67e-09!42;CL:0000514!1.67e-09!42;CL:0000359!4.23e-08!32;CL:0000680!5.17e-07!57;CL:0000056!5.17e-07!57;CL:0000355!5.17e-07!57;CL:0000187!6.15e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.35e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.62e-09,43;CL:0000514,6.62e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000514;7.35e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.30e-14!347;UBERON:0000475!1.71e-12!365;UBERON:0000477!7.34e-11!286;UBERON:0003075!5.37e-08!86;UBERON:0007284!5.37e-08!86;UBERON:0000468!1.17e-07!659;UBERON:0007023!1.17e-07!115;UBERON:0002385!2.82e-07!63;UBERON:0001015!2.82e-07!63;UBERON:0000383!2.82e-07!63;UBERON:0001134!2.87e-07!61;UBERON:0002036!2.87e-07!61;UBERON:0003082!2.87e-07!61;UBERON:0002346!3.11e-07!90;UBERON:0000064!3.99e-07!219;UBERON:0004111!6.35e-07!241;UBERON:0000062!6.73e-07!511;UBERON:0000483!8.30e-07!309;UBERON:0007625!8.69e-07!11;UBERON:0004573!9.62e-07!33;UBERON:0004571!9.62e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.05e-08;9!UBERON:0001557;4.05e-08;9!UBERON:0007625;4.35e-08;11!UBERON:0000020;6.44e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.04e-08,9;UBERON:0007625,4.55e-08,11 | |||
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| |||
|short_description=p1@DIO2 | |||
}} |
Revision as of 05:45, 11 September 2013
Short description: | p1@DIO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DIO2_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 0bp_to_ENST00000553968, uc010tvq.1, uc010tvr.1_5end |
EntrezGene: | DIO2 |
HGNC: | 2884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.62e-09 | 43 |
smooth muscle myoblast | 6.62e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.04e-08 | 9 |
pigment epithelium of eye | 4.55e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.