FFCP PHASE1:Hg19::chr14:77965151..77965165,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=145501|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23176|TSSclassifier=S|UniProt=G3XAI3,G3V2Q2|association_with_transcript=0bp_to_ENST00000216481,ENST00000393684,ENST00000493585,ENST00000554801_5end|coexpression_cluster_id=C50|description=CAGE_peak_1_at_ISM2_5end|id=chr14:77965151..77965165,-|ontology_enrichment_celltype=CL:0000039!1.51e-07!7;CL:0000586!1.51e-07!7|ontology_enrichment_celltype_v019=CL:0002541;2.69e-10;3!CL:0000039;3.31e-10;7!CL:0000586;3.31e-10;7|ontology_enrichment_celltype_v019_2=CL:0002541,2.69e-10,3;CL:0000039,4.06e-10,7;CL:0000586,4.06e-10,7|ontology_enrichment_development_v019=UBERON:0003104;3.68e-07;31|ontology_enrichment_disease=DOID:3095!5.25e-11!22;DOID:2994!5.25e-11!22;DOID:171!1.78e-07!10|ontology_enrichment_disease_v019=DOID:3095;1.71e-13;22!DOID:2994;1.71e-13;22!DOID:171;8.49e-10;10|ontology_enrichment_disease_v019_2=DOID:3095,1.75e-13,22;DOID:2994,1.75e-13,22;DOID:171,7.37e-10,10;DOID:0050687,4.80e-08,143|ontology_enrichment_uberon=UBERON:0003135!3.01e-08!11;UBERON:0003101!4.71e-08!22;UBERON:0000079!4.71e-08!22;UBERON:0000473!9.72e-08!8;UBERON:0005156!2.89e-07!59;UBERON:0000990!2.89e-07!59|ontology_enrichment_uberon_v019=UBERON:0002346;7.20e-12;4!UBERON:0000923;7.20e-12;4!UBERON:0010316;7.20e-12;4!UBERON:0005291;7.20e-12;4!UBERON:0000473;6.97e-11;8!UBERON:0003135;1.67e-10;11!UBERON:0003124;2.69e-10;3!UBERON:0000920;2.69e-10;3!UBERON:0003101;8.05e-10;22!UBERON:0000079;8.05e-10;22!UBERON:0002050;1.73e-09;5!UBERON:0005423;1.73e-09;5!UBERON:0005631;1.32e-07;10!UBERON:0000158;1.32e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.19e-11,8;UBERON:0003124,7.93e-11,7;UBERON:0003135,1.71e-10,11;UBERON:0000920,2.69e-10,3;UBERON:0003101,7.17e-10,22;UBERON:0000079,7.17e-10,22;UBERON:0005631,9.44e-10,14;UBERON:0000158,9.44e-10,14;UBERON:0005156,1.42e-07,59;UBERON:0000990,1.42e-07,59|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,2.16742572642506,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,2.17366355134002,0,0,0,2.3858578411533,20.4386645527107,0,0,0,0.851363990735132,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,2.80338800071154,0,0.49333509683432,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.323292113637624,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.929551542956147,0.207322110030741,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0.590789906681404,0,4.05861847192275,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,1.80863626235752,0,2.89921674427965,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.81876542867756,0,0,0,0,0,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0,0,0,0,2.90062679019893,3.20810352485256,0,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.422206515571503,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0,129.522551641187,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.6069466851333,0.464845549297286,4.7221852024596,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,1.90921948755562,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0.272999822815972,0,0,2.2054613741845,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,118.244613775635,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,329.467388938012,5.04839957415486,0,0,0,0,0,1.68900326502395,0.597743964753209,0.276283915531148,0,0.20453736500431,0,0.933118762985422,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,1.137934482855,0,0,0,3.79085997398231,1.21537496453305,0.885741385813839,1.5677537021303,0,0,0.295547618953547,0,0,0.83654246567162,0.461701551022782,0,39.1958637459702,309.753630858124,59.1041703255724,1390.84505643117,1045.22013830865,1422.13678241772,0,0.156980256395025,0,0,0,0,0,0,0,0,5.08871057162187,0,0,0.442287822516696,20.1639947828096,0,0,0,0.067401132980677,0,0.234264445725339,0,0.978323094660449,0.485560759068186,0.789168805698781,0,0.30607276163049,0,1.05226393590145,0,0.664653872707185,0,0.941798755221676,0,3.13070500632772,0,0,0,0,2.44617335538842,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0.195551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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=145501 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23176 | |||
|TSSclassifier=S | |||
|UniProt=G3XAI3,G3V2Q2 | |||
|association_with_transcript=0bp_to_ENST00000216481,ENST00000393684,ENST00000493585,ENST00000554801_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_ISM2_5end | |||
|id=chr14:77965151..77965165,- | |||
|ontology_enrichment_celltype=CL:0000039!1.51e-07!7;CL:0000586!1.51e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.69e-10;3!CL:0000039;3.31e-10;7!CL:0000586;3.31e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.69e-10,3;CL:0000039,4.06e-10,7;CL:0000586,4.06e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.68e-07;31 | |||
|ontology_enrichment_disease=DOID:3095!5.25e-11!22;DOID:2994!5.25e-11!22;DOID:171!1.78e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.71e-13;22!DOID:2994;1.71e-13;22!DOID:171;8.49e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.75e-13,22;DOID:2994,1.75e-13,22;DOID:171,7.37e-10,10;DOID:0050687,4.80e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0003135!3.01e-08!11;UBERON:0003101!4.71e-08!22;UBERON:0000079!4.71e-08!22;UBERON:0000473!9.72e-08!8;UBERON:0005156!2.89e-07!59;UBERON:0000990!2.89e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.20e-12;4!UBERON:0000923;7.20e-12;4!UBERON:0010316;7.20e-12;4!UBERON:0005291;7.20e-12;4!UBERON:0000473;6.97e-11;8!UBERON:0003135;1.67e-10;11!UBERON:0003124;2.69e-10;3!UBERON:0000920;2.69e-10;3!UBERON:0003101;8.05e-10;22!UBERON:0000079;8.05e-10;22!UBERON:0002050;1.73e-09;5!UBERON:0005423;1.73e-09;5!UBERON:0005631;1.32e-07;10!UBERON:0000158;1.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.19e-11,8;UBERON:0003124,7.93e-11,7;UBERON:0003135,1.71e-10,11;UBERON:0000920,2.69e-10,3;UBERON:0003101,7.17e-10,22;UBERON:0000079,7.17e-10,22;UBERON:0005631,9.44e-10,14;UBERON:0000158,9.44e-10,14;UBERON:0005156,1.42e-07,59;UBERON:0000990,1.42e-07,59 | |||
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| |||
|short_description=p1@ISM2 | |||
}} |
Revision as of 05:42, 11 September 2013
Short description: | p1@ISM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ISM2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000216481, ENST00000393684, ENST00000493585, ENST00000554801_5end |
EntrezGene: | ISM2 |
HGNC: | 23176 |
UniProt: | G3XAI3G3V2Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.69e-10 | 3 |
germ line cell | 4.06e-10 | 7 |
germ cell | 4.06e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.19e-11 | 8 |
chorion | 7.93e-11 | 7 |
male reproductive organ | 1.71e-10 | 11 |
egg chorion | 2.69e-10 | 3 |
male organism | 7.17e-10 | 22 |
male reproductive system | 7.17e-10 | 22 |
extraembryonic membrane | 9.44e-10 | 14 |
membranous layer | 9.44e-10 | 14 |
reproductive structure | 1.42e-07 | 59 |
reproductive system | 1.42e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.75e-13 | 22 |
germ cell cancer | 1.75e-13 | 22 |
neuroectodermal tumor | 7.37e-10 | 10 |
cell type cancer | 4.80e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.