FFCP PHASE1:Hg19::chr14:68000417..68000431,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=161145|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20130|TSSclassifier=S|UniProt=G3V5K9|association_with_transcript=24bp_to_ENST00000554278_5end|coexpression_cluster_id=C30|description=CAGE_peak_5_at_TMEM229B_5end|id=chr14:68000417..68000431,-|ontology_enrichment_celltype=CL:0000066!1.19e-10!254;CL:0002319!2.95e-10!25;CL:0000133!1.11e-08!59;CL:0000540!2.94e-08!6;CL:0000031!2.94e-08!6;CL:0000404!2.94e-08!6;CL:0000221!4.24e-08!71;CL:0000243!5.10e-07!15;CL:0000125!5.10e-07!15;CL:0000030!5.10e-07!15;CL:0000339!5.10e-07!15|ontology_enrichment_celltype_v019=CL:0000650;9.86e-18;2!CL:1000500;9.86e-18;2!CL:1000618;9.86e-18;2!CL:1001318;9.86e-18;2!CL:0002173;9.86e-18;2!CL:0000307;2.74e-12;3!CL:0000669;1.50e-09;4!CL:0000306;1.50e-09;4!CL:0002222;1.50e-09;4!CL:0002224;1.50e-09;4!CL:0000312;6.78e-08;5!CL:0000240;8.72e-07;6!CL:0000311;8.72e-07;6!CL:0000079;8.72e-07;6!CL:0000237;8.72e-07;6|ontology_enrichment_celltype_v019_2=CL:0000650,9.07e-18,2;CL:1000500,9.07e-18,2;CL:1000618,9.07e-18,2;CL:1001318,9.07e-18,2;CL:0002173,9.07e-18,2;CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0000306,1.32e-09,4;CL:0002222,1.32e-09,4;CL:0002224,1.32e-09,4;CL:0000669,1.44e-09,4;CL:0000312,7.49e-08,5;CL:0000240,9.49e-07,6;CL:0000311,9.49e-07,6;CL:0000079,9.49e-07,6;CL:0000237,9.49e-07,6;CL:0000036,9.49e-07,6;CL:0000357,9.49e-07,6;CL:0000114,9.49e-07,6|ontology_enrichment_development_v019=UBERON:0007123;1.59e-27;5!CL:0000377;2.74e-12;3!CL:0000357;8.72e-07;6!CL:0000114;8.72e-07;6|ontology_enrichment_disease=DOID:305!8.88e-16!106;DOID:299!1.66e-13!25;DOID:0050687!6.28e-13!143;DOID:162!5.21e-09!235;DOID:14566!1.49e-08!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002046!6.60e-07!5;UBERON:0004117!6.60e-07!5;UBERON:0007689!6.60e-07!5;UBERON:0007123!6.60e-07!5;UBERON:0003091!6.60e-07!5|ontology_enrichment_uberon_v019=UBERON:0002046;1.59e-27;5!UBERON:0003567;9.86e-18;2!UBERON:0003838;9.86e-18;2!UBERON:0003586;9.86e-18;2!UBERON:0005169;9.86e-18;2!UBERON:0002321;9.86e-18;2!UBERON:0005215;9.86e-18;2!UBERON:0002303;9.86e-18;2!UBERON:0002319;9.86e-18;2!UBERON:0010077;1.50e-09;4!UBERON:0005389;1.50e-09;4!UBERON:0003891;1.50e-09;4!UBERON:0000484;1.50e-09;4!UBERON:0000965;1.50e-09;4!UBERON:0001803;1.50e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0003567,9.07e-18,2;UBERON:0003838,9.07e-18,2;UBERON:0003586,9.07e-18,2;UBERON:0005169,9.07e-18,2;UBERON:0002321,9.07e-18,2;UBERON:0005215,9.07e-18,2;UBERON:0002303,9.07e-18,2;UBERON:0002319,9.07e-18,2;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0010077,1.32e-09,4;UBERON:0005389,1.32e-09,4;UBERON:0000484,1.32e-09,4;UBERON:0002546,1.32e-09,4;UBERON:0000965,1.32e-09,4;UBERON:0001803,1.32e-09,4;UBERON:0003073,1.32e-09,4;UBERON:0005426,1.32e-09,4;UBERON:0003891,1.44e-09,4;UBERON:0008814,2.09e-08,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,1.35473218771926,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886642856860642,0,0.10893846351899,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.424059214301822,0.216388639742091,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=161145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20130 | |||
|TSSclassifier=S | |||
|UniProt=G3V5K9 | |||
|association_with_transcript=24bp_to_ENST00000554278_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_5_at_TMEM229B_5end | |||
|id=chr14:68000417..68000431,- | |||
|ontology_enrichment_celltype=CL:0000066!1.19e-10!254;CL:0002319!2.95e-10!25;CL:0000133!1.11e-08!59;CL:0000540!2.94e-08!6;CL:0000031!2.94e-08!6;CL:0000404!2.94e-08!6;CL:0000221!4.24e-08!71;CL:0000243!5.10e-07!15;CL:0000125!5.10e-07!15;CL:0000030!5.10e-07!15;CL:0000339!5.10e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000650;9.86e-18;2!CL:1000500;9.86e-18;2!CL:1000618;9.86e-18;2!CL:1001318;9.86e-18;2!CL:0002173;9.86e-18;2!CL:0000307;2.74e-12;3!CL:0000669;1.50e-09;4!CL:0000306;1.50e-09;4!CL:0002222;1.50e-09;4!CL:0002224;1.50e-09;4!CL:0000312;6.78e-08;5!CL:0000240;8.72e-07;6!CL:0000311;8.72e-07;6!CL:0000079;8.72e-07;6!CL:0000237;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,9.07e-18,2;CL:1000500,9.07e-18,2;CL:1000618,9.07e-18,2;CL:1001318,9.07e-18,2;CL:0002173,9.07e-18,2;CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0000306,1.32e-09,4;CL:0002222,1.32e-09,4;CL:0002224,1.32e-09,4;CL:0000669,1.44e-09,4;CL:0000312,7.49e-08,5;CL:0000240,9.49e-07,6;CL:0000311,9.49e-07,6;CL:0000079,9.49e-07,6;CL:0000237,9.49e-07,6;CL:0000036,9.49e-07,6;CL:0000357,9.49e-07,6;CL:0000114,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.59e-27;5!CL:0000377;2.74e-12;3!CL:0000357;8.72e-07;6!CL:0000114;8.72e-07;6 | |||
|ontology_enrichment_disease=DOID:305!8.88e-16!106;DOID:299!1.66e-13!25;DOID:0050687!6.28e-13!143;DOID:162!5.21e-09!235;DOID:14566!1.49e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!6.60e-07!5;UBERON:0004117!6.60e-07!5;UBERON:0007689!6.60e-07!5;UBERON:0007123!6.60e-07!5;UBERON:0003091!6.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.59e-27;5!UBERON:0003567;9.86e-18;2!UBERON:0003838;9.86e-18;2!UBERON:0003586;9.86e-18;2!UBERON:0005169;9.86e-18;2!UBERON:0002321;9.86e-18;2!UBERON:0005215;9.86e-18;2!UBERON:0002303;9.86e-18;2!UBERON:0002319;9.86e-18;2!UBERON:0010077;1.50e-09;4!UBERON:0005389;1.50e-09;4!UBERON:0003891;1.50e-09;4!UBERON:0000484;1.50e-09;4!UBERON:0000965;1.50e-09;4!UBERON:0001803;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0003567,9.07e-18,2;UBERON:0003838,9.07e-18,2;UBERON:0003586,9.07e-18,2;UBERON:0005169,9.07e-18,2;UBERON:0002321,9.07e-18,2;UBERON:0005215,9.07e-18,2;UBERON:0002303,9.07e-18,2;UBERON:0002319,9.07e-18,2;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0010077,1.32e-09,4;UBERON:0005389,1.32e-09,4;UBERON:0000484,1.32e-09,4;UBERON:0002546,1.32e-09,4;UBERON:0000965,1.32e-09,4;UBERON:0001803,1.32e-09,4;UBERON:0003073,1.32e-09,4;UBERON:0005426,1.32e-09,4;UBERON:0003891,1.44e-09,4;UBERON:0008814,2.09e-08,18 | |||
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|short_description=p5@TMEM229B | |||
}} |
Revision as of 05:14, 11 September 2013
Short description: | p5@TMEM229B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TMEM229B_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 24bp_to_ENST00000554278_5end |
EntrezGene: | TMEM229B |
HGNC: | 20130 |
UniProt: | G3V5K9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 9.07e-18 | 2 |
kidney interstitial cell | 9.07e-18 | 2 |
juxtaglomerular complex cell | 9.07e-18 | 2 |
renal interstitial pericyte | 9.07e-18 | 2 |
extraglomerular mesangial cell | 9.07e-18 | 2 |
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
crystallin accumulating cell | 1.32e-09 | 4 |
vertebrate lens cell | 1.32e-09 | 4 |
lens epithelial cell | 1.32e-09 | 4 |
pericyte cell | 1.44e-09 | 4 |
keratinocyte | 7.49e-08 | 5 |
stratified squamous epithelial cell | 9.49e-07 | 6 |
keratin accumulating cell | 9.49e-07 | 6 |
stratified epithelial cell | 9.49e-07 | 6 |
keratinizing barrier epithelial cell | 9.49e-07 | 6 |
epithelial fate stem cell | 9.49e-07 | 6 |
stratified epithelial stem cell | 9.49e-07 | 6 |
surface ectodermal cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.59e-27 | 5 |
pharyngeal pouch | 1.59e-27 | 5 |
thyroid diverticulum | 1.59e-27 | 5 |
pharyngeal pouch 2 | 1.59e-27 | 5 |
thyroid primordium | 1.59e-27 | 5 |
abdomen connective tissue | 9.07e-18 | 2 |
abdominal segment connective tissue | 9.07e-18 | 2 |
trunk connective tissue | 9.07e-18 | 2 |
interstitial tissue | 9.07e-18 | 2 |
extraglomerular mesangium | 9.07e-18 | 2 |
kidney interstitium | 9.07e-18 | 2 |
juxtaglomerular apparatus | 9.07e-18 | 2 |
mesangium | 9.07e-18 | 2 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
cuboidal epithelium | 1.32e-09 | 4 |
transparent eye structure | 1.32e-09 | 4 |
simple cuboidal epithelium | 1.32e-09 | 4 |
cranial placode | 1.32e-09 | 4 |
lens of camera-type eye | 1.32e-09 | 4 |
epithelium of lens | 1.32e-09 | 4 |
lens placode | 1.32e-09 | 4 |
lens vesicle | 1.32e-09 | 4 |
stroma | 1.44e-09 | 4 |
pharyngeal arch system | 2.09e-08 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.