FFCP PHASE1:Hg19::chr14:61116168..61116180,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10887|TSSclassifier=S|UniProt=Q15475|association_with_transcript=0bp_to_ENST00000247182_5end|description=CAGE_peak_2_at_SIX1_5end|id=chr14:61116168..61116180,-|ontology_enrichment_celltype=CL:0000055!6.88e-16!180;CL:0000057!8.99e-12!75;CL:0000499!6.08e-07!27|ontology_enrichment_celltype_v019=CL:0000188;1.13e-08;9!CL:0000680;3.71e-07;7!CL:0002556;4.77e-07;6!CL:0000499;5.04e-07;28|ontology_enrichment_celltype_v019_2=CL:0000057,2.21e-10,76;CL:0000188,1.11e-08,9;CL:0000499,5.09e-07,28;CL:0002556,5.16e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!5.58e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!4.79e-17!365;UBERON:0003102!9.13e-16!95;UBERON:0002100!1.77e-12!216;UBERON:0003104!2.41e-12!238;UBERON:0009142!2.41e-12!238;UBERON:0001004!5.76e-11!72;UBERON:0000165!9.25e-10!28;UBERON:0000930!9.25e-10!28;UBERON:0000481!2.62e-09!347;UBERON:0000914!3.65e-09!83;UBERON:0002329!3.65e-09!83;UBERON:0003077!3.65e-09!83;UBERON:0003059!3.65e-09!83;UBERON:0007282!3.65e-09!83;UBERON:0009618!3.65e-09!83;UBERON:0007285!3.65e-09!83;UBERON:0001444!4.57e-09!48;UBERON:0000161!2.23e-08!35;UBERON:0005256!3.50e-08!143;UBERON:0004119!6.70e-08!169;UBERON:0000925!6.70e-08!169;UBERON:0006595!6.70e-08!169;UBERON:0000486!1.27e-07!82;UBERON:0000078!1.28e-07!18;UBERON:0001007!1.78e-07!155;UBERON:0001555!1.78e-07!155;UBERON:0007026!1.78e-07!155;UBERON:0000166!4.46e-07!21;UBERON:0000915!9.90e-07!52|ontology_enrichment_uberon_v019=UBERON:0001134;2.23e-14;16!UBERON:0002036;2.23e-14;16!UBERON:0000165;7.45e-11;28!UBERON:0004905;4.15e-09;8!UBERON:0000982;4.15e-09;8!UBERON:0004770;4.15e-09;8!UBERON:0000075;9.72e-09;16!UBERON:0002204;6.77e-08;70!UBERON:0001758;4.77e-07;6!UBERON:0003672;4.77e-07;6!UBERON:0007811;4.95e-07;52!UBERON:0002385;8.38e-07;31!UBERON:0001015;8.38e-07;31!UBERON:0000383;8.38e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.04e-12,99;UBERON:0000165,7.29e-12,29;UBERON:0000930,7.29e-12,29;UBERON:0001444,1.55e-09,49;UBERON:0004905,3.71e-09,8;UBERON:0000982,3.71e-09,8;UBERON:0004770,3.71e-09,8;UBERON:0000075,1.10e-08,16;UBERON:0000166,6.52e-08,22;UBERON:0000153,1.26e-07,62;UBERON:0007811,1.26e-07,62;UBERON:0000161,2.21e-07,36;UBERON:0000033,3.32e-07,56;UBERON:0001758,5.16e-07,6;UBERON:0003672,5.16e-07,6;UBERON:0011137,7.09e-07,14;UBERON:0007503,9.85e-07,78|phase1_expression=1.2717486548939,0.856402095563933,0,1.0007329835313,1.34088328328186,1.74467704820074,5.06599756336621,0.631719873426831,2.61185628199839,0.245733936501509,0.697801167972428,0,0,9.0349437660834,14.5814845320283,0.672325146451775,0,2.19093027116212,0.975865597581014,2.95490539384291,5.50801866359483,1.56727360739044,0.572471974262113,0.410623275218653,0.753255837568817,0,0,0,0,0,0,0.919421224478927,2.409647350226,0.739508020333575,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,3.2529523714611,3.00802746381534,8.98048417557107,0.795285947051099,6.8128881842369,0.567208902984407,1.77383517970051,2.0202000709419,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,2.18047026071267,1.98788780678127,0,1.05927344650575,1.72101972449288,1.06400514659507,1.68203280042692,0,0.24666754841716,0,0.134710672069688,0,7.7192288098915,3.45705554687999,5.85803579584492,1.24864030732128,1.1409436430889,1.64393548606981,2.58355897016283,0.647491777472526,1.26405726032024,3.47062091133319,17.3196387409593,4.64966015290945,3.56400857184616,3.70900393917835,0.910161361938026,0.718618141816238,4.88174730466792,9.75924455001321,5.26421819419948,10.9744405220209,6.12975591598039,4.05642759047811,0.113432183160021,1.4351170855109,0.427114777637135,0.423863802319124,1.80054657650641,1.13357782162283,2.83404594050192,0.930584281657949,0.337552664482532,0.389748020644795,2.77677151668526,1.01254888506529,1.77810662500693,3.19508633264953,1.81353776809752,1.69560592310488,0,0.272746120590835,0.286804595389004,0,0,0,1.0366105501537,0,0,1.56449532329816,0.643240938192885,2.76269842704961,2.78620756819187,5.0531563716871,0.354920400119532,0.505754070234305,0.482022059766964,0.220587945464788,0.653638332277218,1.18635309555548,0.808987848960987,0.392442930250692,0.769494313892781,0,5.60967095213783,0,0,0,0,0,0,0.245976877086227,0.857839051492628,0,1.1240175325762,0,0,3.58389135841357,1.03993478527958,4.3299402607582,0.115930404975077,3.75707821554629,0.288732895522148,0,0,4.74122638775565,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,12.5586814466804,2.61576041299968,7.4805051537369,0,0,2.535908257668,0,1.040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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10887 | |||
|TSSclassifier=S | |||
|UniProt=Q15475 | |||
|association_with_transcript=0bp_to_ENST00000247182_5end | |||
|description=CAGE_peak_2_at_SIX1_5end | |||
|id=chr14:61116168..61116180,- | |||
|ontology_enrichment_celltype=CL:0000055!6.88e-16!180;CL:0000057!8.99e-12!75;CL:0000499!6.08e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.13e-08;9!CL:0000680;3.71e-07;7!CL:0002556;4.77e-07;6!CL:0000499;5.04e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.21e-10,76;CL:0000188,1.11e-08,9;CL:0000499,5.09e-07,28;CL:0002556,5.16e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.58e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.79e-17!365;UBERON:0003102!9.13e-16!95;UBERON:0002100!1.77e-12!216;UBERON:0003104!2.41e-12!238;UBERON:0009142!2.41e-12!238;UBERON:0001004!5.76e-11!72;UBERON:0000165!9.25e-10!28;UBERON:0000930!9.25e-10!28;UBERON:0000481!2.62e-09!347;UBERON:0000914!3.65e-09!83;UBERON:0002329!3.65e-09!83;UBERON:0003077!3.65e-09!83;UBERON:0003059!3.65e-09!83;UBERON:0007282!3.65e-09!83;UBERON:0009618!3.65e-09!83;UBERON:0007285!3.65e-09!83;UBERON:0001444!4.57e-09!48;UBERON:0000161!2.23e-08!35;UBERON:0005256!3.50e-08!143;UBERON:0004119!6.70e-08!169;UBERON:0000925!6.70e-08!169;UBERON:0006595!6.70e-08!169;UBERON:0000486!1.27e-07!82;UBERON:0000078!1.28e-07!18;UBERON:0001007!1.78e-07!155;UBERON:0001555!1.78e-07!155;UBERON:0007026!1.78e-07!155;UBERON:0000166!4.46e-07!21;UBERON:0000915!9.90e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.23e-14;16!UBERON:0002036;2.23e-14;16!UBERON:0000165;7.45e-11;28!UBERON:0004905;4.15e-09;8!UBERON:0000982;4.15e-09;8!UBERON:0004770;4.15e-09;8!UBERON:0000075;9.72e-09;16!UBERON:0002204;6.77e-08;70!UBERON:0001758;4.77e-07;6!UBERON:0003672;4.77e-07;6!UBERON:0007811;4.95e-07;52!UBERON:0002385;8.38e-07;31!UBERON:0001015;8.38e-07;31!UBERON:0000383;8.38e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.04e-12,99;UBERON:0000165,7.29e-12,29;UBERON:0000930,7.29e-12,29;UBERON:0001444,1.55e-09,49;UBERON:0004905,3.71e-09,8;UBERON:0000982,3.71e-09,8;UBERON:0004770,3.71e-09,8;UBERON:0000075,1.10e-08,16;UBERON:0000166,6.52e-08,22;UBERON:0000153,1.26e-07,62;UBERON:0007811,1.26e-07,62;UBERON:0000161,2.21e-07,36;UBERON:0000033,3.32e-07,56;UBERON:0001758,5.16e-07,6;UBERON:0003672,5.16e-07,6;UBERON:0011137,7.09e-07,14;UBERON:0007503,9.85e-07,78 | |||
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| |||
|short_description=p2@SIX1 | |||
}} |
Revision as of 04:58, 11 September 2013
Short description: | p2@SIX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SIX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000247182_5end |
EntrezGene: | SIX1 |
HGNC: | 10887 |
UniProt: | Q15475 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.21e-10 | 76 |
cell of skeletal muscle | 1.11e-08 | 9 |
stromal cell | 5.09e-07 | 28 |
fibroblast of periodontium | 5.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.04e-12 | 99 |
mouth | 7.29e-12 | 29 |
stomodeum | 7.29e-12 | 29 |
subdivision of head | 1.55e-09 | 49 |
articulation | 3.71e-09 | 8 |
skeletal joint | 3.71e-09 | 8 |
articular system | 3.71e-09 | 8 |
subdivision of skeletal system | 1.10e-08 | 16 |
oral opening | 6.52e-08 | 22 |
anterior region of body | 1.26e-07 | 62 |
craniocervical region | 1.26e-07 | 62 |
orifice | 2.21e-07 | 36 |
head | 3.32e-07 | 56 |
periodontium | 5.16e-07 | 6 |
dentition | 5.16e-07 | 6 |
axial skeletal system | 7.09e-07 | 14 |
epithelial vesicle | 9.85e-07 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.