FFCP PHASE1:Hg19::chr14:29047309..29047323,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C221|description=CAGE_peak_at_chr14:29047309..29047323,+|id=chr14:29047309..29047323,+|ontology_enrichment_celltype=CL:0002494!1.64e-08!16;CL:0000055!6.00e-08!180|ontology_enrichment_celltype_v019=CL:0002603;1.21e-09;3!CL:0002494;4.76e-09;16!CL:1000306;2.48e-07;4!CL:0002547;2.48e-07;4!CL:0002549;6.00e-07;2|ontology_enrichment_celltype_v019_2=CL:0002603,9.10e-10,3;CL:0002494,4.01e-09,16;CL:1000306,2.24e-07,4;CL:0002547,2.24e-07,4;CL:0002549,4.42e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!7.70e-09!106;DOID:0050687!1.46e-08!143|ontology_enrichment_disease_v019=DOID:3908;8.70e-11;5!DOID:3910;1.04e-07;2|ontology_enrichment_disease_v019_2=DOID:3908,9.51e-11,5;DOID:3910,1.09e-07,2;DOID:0050687,1.48e-07,143;DOID:305,4.50e-07,106|ontology_enrichment_uberon=UBERON:0000481!1.55e-07!347;UBERON:0000119!1.75e-07!312;UBERON:0001048!1.75e-07!168;UBERON:0000483!7.28e-07!309;UBERON:0002200!9.17e-07!11;UBERON:0006876!9.17e-07!11|ontology_enrichment_uberon_v019=UBERON:0004903;1.04e-07;2!UBERON:0002173;1.04e-07;2!UBERON:0002186;1.04e-07;2!UBERON:0004797;2.48e-07;4!UBERON:0000415;2.48e-07;4!UBERON:0007240;2.48e-07;4!UBERON:0005742;2.48e-07;4!UBERON:0005734;2.48e-07;4!UBERON:0004664;2.48e-07;4!UBERON:0004663;2.48e-07;4!UBERON:0005629;6.00e-07;2!UBERON:0005358;6.00e-07;2!UBERON:0001886;6.00e-07;2!UBERON:0004086;6.00e-07;2!UBERON:0005282;6.00e-07;2!UBERON:0005281;6.00e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.91e-08,160;UBERON:0004903,1.09e-07,2;UBERON:0002173,1.09e-07,2;UBERON:0002186,1.09e-07,2;UBERON:0000948,1.99e-07,24;UBERON:0005498,1.99e-07,24;UBERON:0004140,1.99e-07,24;UBERON:0009881,1.99e-07,24;UBERON:0004141,1.99e-07,24;UBERON:0003084,1.99e-07,24;UBERON:0007005,1.99e-07,24;UBERON:0004139,1.99e-07,24;UBERON:0004291,1.99e-07,24;UBERON:0000415,2.24e-07,4;UBERON:0007240,2.24e-07,4;UBERON:0005742,2.24e-07,4;UBERON:0005734,2.24e-07,4;UBERON:0004664,2.24e-07,4;UBERON:0004663,2.24e-07,4;UBERON:0005629,4.42e-07,2;UBERON:0005358,4.42e-07,2;UBERON:0001886,4.42e-07,2;UBERON:0004086,4.42e-07,2;UBERON:0005282,4.42e-07,2;UBERON:0005281,4.42e-07,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93987385845721,1.42800483870977,2.5076377718247,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,2.91300197789081,3.15520282823695,1.41867352879343,0,0,0,5.29058760179603,31.6570079363767,8.50001896189985,3.48122083583342,1.72852777344,0.234321431833797,0,0,0,0.587172493218824,0.647491777472526,0.842704840213491,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0,4.8775838758809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.716468181622786,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,0,2.4935017179123,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.308419387605311,0,0.410635780069046,1.03850885836724,0,0.241718899183244,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.275673144969061,0.322260734604821,0,0,0.0890320356467374,0,0,0.765676274967505,0,0,3.1481234683064,0,0.308033580176089,0,0,0,0.286249773483982,2.232950216158,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0,0.202182481573316,4.75530963519025,0.421258456238981,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58748121821156,0,143.488754137239,0,0,0,0,0,12.2439575525196,0,0,0,0,0,0,0,0,7.18946809178615,0,0,0,0,2.22273980289274,0,0,0,0,0,0,14.2241810356875,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,3.32326936353593,8.27479889688747,5.96472544973728,15.531415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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr14:29047309..29047323,+ | |||
|id=chr14:29047309..29047323,+ | |||
|ontology_enrichment_celltype=CL:0002494!1.64e-08!16;CL:0000055!6.00e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002603;1.21e-09;3!CL:0002494;4.76e-09;16!CL:1000306;2.48e-07;4!CL:0002547;2.48e-07;4!CL:0002549;6.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,9.10e-10,3;CL:0002494,4.01e-09,16;CL:1000306,2.24e-07,4;CL:0002547,2.24e-07,4;CL:0002549,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.70e-09!106;DOID:0050687!1.46e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3908;8.70e-11;5!DOID:3910;1.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,9.51e-11,5;DOID:3910,1.09e-07,2;DOID:0050687,1.48e-07,143;DOID:305,4.50e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.55e-07!347;UBERON:0000119!1.75e-07!312;UBERON:0001048!1.75e-07!168;UBERON:0000483!7.28e-07!309;UBERON:0002200!9.17e-07!11;UBERON:0006876!9.17e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.04e-07;2!UBERON:0002173;1.04e-07;2!UBERON:0002186;1.04e-07;2!UBERON:0004797;2.48e-07;4!UBERON:0000415;2.48e-07;4!UBERON:0007240;2.48e-07;4!UBERON:0005742;2.48e-07;4!UBERON:0005734;2.48e-07;4!UBERON:0004664;2.48e-07;4!UBERON:0004663;2.48e-07;4!UBERON:0005629;6.00e-07;2!UBERON:0005358;6.00e-07;2!UBERON:0001886;6.00e-07;2!UBERON:0004086;6.00e-07;2!UBERON:0005282;6.00e-07;2!UBERON:0005281;6.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.91e-08,160;UBERON:0004903,1.09e-07,2;UBERON:0002173,1.09e-07,2;UBERON:0002186,1.09e-07,2;UBERON:0000948,1.99e-07,24;UBERON:0005498,1.99e-07,24;UBERON:0004140,1.99e-07,24;UBERON:0009881,1.99e-07,24;UBERON:0004141,1.99e-07,24;UBERON:0003084,1.99e-07,24;UBERON:0007005,1.99e-07,24;UBERON:0004139,1.99e-07,24;UBERON:0004291,1.99e-07,24;UBERON:0000415,2.24e-07,4;UBERON:0007240,2.24e-07,4;UBERON:0005742,2.24e-07,4;UBERON:0005734,2.24e-07,4;UBERON:0004664,2.24e-07,4;UBERON:0004663,2.24e-07,4;UBERON:0005629,4.42e-07,2;UBERON:0005358,4.42e-07,2;UBERON:0001886,4.42e-07,2;UBERON:0004086,4.42e-07,2;UBERON:0005282,4.42e-07,2;UBERON:0005281,4.42e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93987385845721,1.42800483870977,2.5076377718247,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,2.91300197789081,3.15520282823695,1.41867352879343,0,0,0,5.29058760179603,31.6570079363767,8.50001896189985,3.48122083583342,1.72852777344,0.234321431833797,0,0,0,0.587172493218824,0.647491777472526,0.842704840213491,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0,4.8775838758809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.716468181622786,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,0,2.4935017179123,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.308419387605311,0,0.410635780069046,1.03850885836724,0,0.241718899183244,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.275673144969061,0.322260734604821,0,0,0.0890320356467374,0,0,0.765676274967505,0,0,3.1481234683064,0,0.308033580176089,0,0,0,0.286249773483982,2.232950216158,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0,0.202182481573316,4.75530963519025,0.421258456238981,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58748121821156,0,143.488754137239,0,0,0,0,0,12.2439575525196,0,0,0,0,0,0,0,0,7.18946809178615,0,0,0,0,2.22273980289274,0,0,0,0,0,0,14.2241810356875,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,3.32326936353593,8.27479889688747,5.96472544973728,15.5314158704846,0,0.416024019039416,0,0.391969589657511,0.0870592065804026,0,9.28724575346729,0.19351266257817,0.292357268344742,0.0821154570532092,0,0.0882561266915003,0,8.90772510203881,1.19228767021794,0,0,1.28254112402454,0,0,0,0,0,2.0167671718341,0.49701014226173,0,0,0,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,9.50403028674658,2.15144807199414,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,17.9971787465434,5.15606999641603,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0.228840068396924,0,1.70980920641059,3.99208904972012,0.159296767163702,0,1.55262956876259,0,0.265841714557995,0,0.751288044986092,0.380805212168795,0,0,2.14821114084977,0,0,1.20008329398946,0,0,0,0,0.643324774124777,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,4.43755459053117,0,0,0,0.567515953566836,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0.924205329202706,0,6.90359926060101,0,0,0,0,0,7.36973628795435,53.8196153830045,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,13.8905287644309,0,0,0,5.56157009460346,0,0,0,0,0,0,0,0,1.51113852978563,0.173858272302579,0,0,0,0,0,3.54996002191696,4.4310970474762,0,0,0,0,0,4.41676051268593,0,0,0,0,0,0,0,0,0.67767649223376,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,1.12337913364836,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,4.55858304221457,2.34800160930974,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:29047309..29047323,+ | |||
}} |
Revision as of 04:15, 11 September 2013
Short description: | p@chr14:29047309..29047323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:29047309..29047323, + |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 9.10e-10 | 3 |
cardiocyte | 4.01e-09 | 16 |
fibroblast of tunica adventitia of artery | 2.24e-07 | 4 |
fibroblast of the aortic adventitia | 2.24e-07 | 4 |
fibroblast of choroid plexus | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primordium | 2.91e-08 | 160 |
bronchoalveolar duct junction | 1.09e-07 | 2 |
alveolar duct | 1.09e-07 | 2 |
bronchiole | 1.09e-07 | 2 |
heart | 1.99e-07 | 24 |
primitive heart tube | 1.99e-07 | 24 |
primary heart field | 1.99e-07 | 24 |
anterior lateral plate mesoderm | 1.99e-07 | 24 |
heart tube | 1.99e-07 | 24 |
heart primordium | 1.99e-07 | 24 |
cardiac mesoderm | 1.99e-07 | 24 |
cardiogenic plate | 1.99e-07 | 24 |
heart rudiment | 1.99e-07 | 24 |
artery wall | 2.24e-07 | 4 |
tunica adventitia of artery | 2.24e-07 | 4 |
adventitia | 2.24e-07 | 4 |
tunica adventitia of blood vessel | 2.24e-07 | 4 |
aorta tunica adventitia | 2.24e-07 | 4 |
aorta wall | 2.24e-07 | 4 |
vascular plexus | 4.42e-07 | 2 |
ventricle of nervous system | 4.42e-07 | 2 |
choroid plexus | 4.42e-07 | 2 |
brain ventricle | 4.42e-07 | 2 |
ventricular system of brain | 4.42e-07 | 2 |
ventricular system of central nervous system | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 9.51e-11 | 5 |
lung adenocarcinoma | 1.09e-07 | 2 |
cell type cancer | 1.48e-07 | 143 |
carcinoma | 4.50e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.