FFCP PHASE1:Hg19::chr14:106322129..106322143,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=171bp_to_AJ294734_5end|coexpression_cluster_id=C350|description=CAGE_peak_1_at_AJ294734_5end|id=chr14:106322129..106322143,-|ontology_enrichment_celltype=CL:0000945!4.38e-39!24;CL:0000826!4.38e-39!24;CL:0000236!6.75e-24!14;CL:0000542!8.94e-23!53;CL:0000051!8.94e-23!53;CL:0000838!2.37e-21!52;CL:0002087!2.74e-11!119;CL:0000037!2.79e-10!172;CL:0000566!2.79e-10!172;CL:0000738!1.30e-09!140;CL:0000988!4.24e-09!182;CL:0002031!2.07e-07!124;CL:0002032!3.12e-07!165;CL:0000837!3.12e-07!165|ontology_enrichment_celltype_v019=CL:0000945;3.61e-62;24!CL:0000236;9.59e-35;13!CL:0000542;2.43e-17;53!CL:0000226;4.07e-09;3!CL:0000842;4.07e-09;3|ontology_enrichment_celltype_v019_2=CL:0000945,3.37e-62,24;CL:0000826,3.37e-62,24;CL:0000236,1.53e-37,14;CL:0000542,2.19e-27,53;CL:0000051,2.19e-27,53;CL:0000838,2.46e-25,52;CL:0002087,1.43e-14,115;CL:0000738,2.82e-12,136;CL:0000037,3.94e-11,168;CL:0000988,3.57e-10,177;CL:0002031,2.26e-09,120;CL:0000226,2.69e-09,3;CL:0000842,2.69e-09,3;CL:0002032,1.81e-08,161;CL:0000837,1.81e-08,161|ontology_enrichment_development_v019=CL:0000051;2.43e-17;53|ontology_enrichment_disease=DOID:0060058!1.50e-08!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.71e-22!115;UBERON:0000178!1.25e-16!15;UBERON:0000179!1.25e-16!15;UBERON:0000463!1.25e-16!15;UBERON:0004177!5.16e-09!7|ontology_enrichment_uberon_v019=UBERON:0000178;2.77e-22;15!UBERON:0000179;2.77e-22;15!UBERON:0000463;2.77e-22;15!UBERON:0002390;1.21e-14;32!UBERON:0002193;7.73e-11;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.18e-22,15;UBERON:0000179,2.18e-22,15;UBERON:0000463,2.18e-22,15;UBERON:0007023,2.00e-11,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8246358452359,22.659762688185,30.3823615870802,0,0,0,0,0,0,39.6632066971144,17.7711540609277,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6394742245852,16.3841583378639,12.4531295540898,14.0820973446947,20.0197993518006,13.2193061189531,15.8650769468367,8.58648379081828,34.1527781465669,29.3618594685469,27.9059456531417,0,1.68152568894461,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0.132957960518865,1.66943437013739,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.94142780736755,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,3.55213326462519,1.52927441428475,3.41788312304498,5.71756261098694,6.17043409629291,7.13320642311989,0.540031437238115,7.13812658664843,0,0,0,39.2044699515266,5.91503773203424,0,0,2.19537308576098,0.5745161103971,1.05836791361941,0,0,0.912938716132769,0,0,3.21654377823046,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.597743964753209,3.59169090190492,0,0,70.4045087237317,0,0,0,0,1.28236427328014,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,4.42287822516696,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,5.7499787461924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,2.2015066337104,0,0,0,0,0,0,0,0,0,0.630445658393585,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,1.28144895081234,0,0.414239055347196,54.5782623993146,0,38.2428758916013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,3.61651457287713,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78536376006016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0.078493092850514,0,0,0,0,0,3.50235066465616,0,0,0,0,0,0,0,1.72090943528111,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63697759728324,0.218559560503957,0,0,0,0,0,0.4226557275834,0,25.2816739365806,9.47530953211585,0.199882311849858,0,0,0,0,3.66983426723633,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0,1.70587185520785,0,0.775066918032073,0.620747142958579,0,0.190941474834495,0,0,0,4.44523549896278,0.573777643141411,0,0,0,0,0,0,0,0,0,9.86241588596029,0|short_description=p1@AJ294734}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=171bp_to_AJ294734_5end | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_1_at_AJ294734_5end | |||
|id=chr14:106322129..106322143,- | |||
|ontology_enrichment_celltype=CL:0000945!4.38e-39!24;CL:0000826!4.38e-39!24;CL:0000236!6.75e-24!14;CL:0000542!8.94e-23!53;CL:0000051!8.94e-23!53;CL:0000838!2.37e-21!52;CL:0002087!2.74e-11!119;CL:0000037!2.79e-10!172;CL:0000566!2.79e-10!172;CL:0000738!1.30e-09!140;CL:0000988!4.24e-09!182;CL:0002031!2.07e-07!124;CL:0002032!3.12e-07!165;CL:0000837!3.12e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.61e-62;24!CL:0000236;9.59e-35;13!CL:0000542;2.43e-17;53!CL:0000226;4.07e-09;3!CL:0000842;4.07e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.37e-62,24;CL:0000826,3.37e-62,24;CL:0000236,1.53e-37,14;CL:0000542,2.19e-27,53;CL:0000051,2.19e-27,53;CL:0000838,2.46e-25,52;CL:0002087,1.43e-14,115;CL:0000738,2.82e-12,136;CL:0000037,3.94e-11,168;CL:0000988,3.57e-10,177;CL:0002031,2.26e-09,120;CL:0000226,2.69e-09,3;CL:0000842,2.69e-09,3;CL:0002032,1.81e-08,161;CL:0000837,1.81e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.43e-17;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.50e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-22!115;UBERON:0000178!1.25e-16!15;UBERON:0000179!1.25e-16!15;UBERON:0000463!1.25e-16!15;UBERON:0004177!5.16e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.77e-22;15!UBERON:0000179;2.77e-22;15!UBERON:0000463;2.77e-22;15!UBERON:0002390;1.21e-14;32!UBERON:0002193;7.73e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.18e-22,15;UBERON:0000179,2.18e-22,15;UBERON:0000463,2.18e-22,15;UBERON:0007023,2.00e-11,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8246358452359,22.659762688185,30.3823615870802,0,0,0,0,0,0,39.6632066971144,17.7711540609277,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6394742245852,16.3841583378639,12.4531295540898,14.0820973446947,20.0197993518006,13.2193061189531,15.8650769468367,8.58648379081828,34.1527781465669,29.3618594685469,27.9059456531417,0,1.68152568894461,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0.132957960518865,1.66943437013739,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.94142780736755,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,3.55213326462519,1.52927441428475,3.41788312304498,5.71756261098694,6.17043409629291,7.13320642311989,0.540031437238115,7.13812658664843,0,0,0,39.2044699515266,5.91503773203424,0,0,2.19537308576098,0.5745161103971,1.05836791361941,0,0,0.912938716132769,0,0,3.21654377823046,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.597743964753209,3.59169090190492,0,0,70.4045087237317,0,0,0,0,1.28236427328014,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,4.42287822516696,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,5.7499787461924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,2.2015066337104,0,0,0,0,0,0,0,0,0,0.630445658393585,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,1.28144895081234,0,0.414239055347196,54.5782623993146,0,38.2428758916013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,3.61651457287713,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78536376006016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0.078493092850514,0,0,0,0,0,3.50235066465616,0,0,0,0,0,0,0,1.72090943528111,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63697759728324,0.218559560503957,0,0,0,0,0,0.4226557275834,0,25.2816739365806,9.47530953211585,0.199882311849858,0,0,0,0,3.66983426723633,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0,1.70587185520785,0,0.775066918032073,0.620747142958579,0,0.190941474834495,0,0,0,4.44523549896278,0.573777643141411,0,0,0,0,0,0,0,0,0,9.86241588596029,0 | |||
|short_description=p1@AJ294734 | |||
}} |
Revision as of 03:35, 11 September 2013
Short description: | p1@AJ294734 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AJ294734_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 171bp_to_AJ294734_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.37e-62 | 24 |
pro-B cell | 3.37e-62 | 24 |
B cell | 1.53e-37 | 14 |
lymphocyte | 2.19e-27 | 53 |
common lymphoid progenitor | 2.19e-27 | 53 |
lymphoid lineage restricted progenitor cell | 2.46e-25 | 52 |
nongranular leukocyte | 1.43e-14 | 115 |
leukocyte | 2.82e-12 | 136 |
hematopoietic stem cell | 3.94e-11 | 168 |
hematopoietic cell | 3.57e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.26e-09 | 120 |
single nucleate cell | 2.69e-09 | 3 |
mononuclear cell | 2.69e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.81e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 2.18e-22 | 15 |
haemolymphatic fluid | 2.18e-22 | 15 |
organism substance | 2.18e-22 | 15 |
adult organism | 2.00e-11 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.