FFCP PHASE1:Hg19::chr13:47127361..47127372,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23143|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20309|TSSclassifier=S|UniProt=F8W6F0|association_with_transcript=-22bp_to_ENST00000389797_5end|description=CAGE_peak_7_at_LRCH1_5end|id=chr13:47127361..47127372,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002262;4.40e-11;2!CL:1000398;4.40e-11;2!CL:0000097;6.69e-09;5!CL:0002541;4.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0002262,4.22e-11,2;CL:1000398,4.22e-11,2;CL:0000097,8.50e-09,5;CL:0002028,8.50e-09,5;CL:0002541,1.98e-07,3|ontology_enrichment_development_v019=UBERON:0007297;3.02e-10;2!UBERON:0006215;2.24e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.04e-07!115|ontology_enrichment_uberon_v019=UBERON:0001281;4.40e-11;2!UBERON:0003497;4.40e-11;2!UBERON:0003909;4.40e-11;2!UBERON:0003835;4.40e-11;2!UBERON:0002370;3.02e-10;2!UBERON:0005058;3.02e-10;2!UBERON:0009113;3.02e-10;2!UBERON:0004177;6.69e-09;5!UBERON:0005057;6.69e-09;5!UBERON:0001280;1.18e-07;3!UBERON:0004647;1.18e-07;3!UBERON:0003124;4.19e-07;3!UBERON:0000920;4.19e-07;3!UBERON:0006947;4.19e-07;3!UBERON:0004054;4.19e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001281,4.22e-11,2;UBERON:0003497,4.22e-11,2;UBERON:0003909,4.22e-11,2;UBERON:0003835,4.22e-11,2;UBERON:0001280,1.15e-07,3;UBERON:0004647,1.15e-07,3;UBERON:0005171,1.15e-07,3;UBERON:0000920,1.98e-07,3;UBERON:0006947,2.18e-07,3;UBERON:0004054,2.18e-07,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.655324116390517,0,0,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0,0.125542639594803,0.840547463227464,0.57470412614962,0.865818594450472,0.393364276848904,0,0.619264493264304,0,0.30120591877825,0,0.774672005803016,0.853015394924529,0.587200878669695,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0.398927315243264,0,0.290209238628584,0,1.24564449799115,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,1.63841583378639,0,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,2.34894875748376,1.52909291250092,1.32171328579026,1.68152568894461,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0.541607727530031,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0,0.759059076058509,0,0.651083453856419,0,0,0.383959833463255,0,0,0,0.403213486449465,1.06976078313403,0.434473211648397,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0.371457501329565,0.79504962946682,0,0,0,0,0,0,0.258416759169329,0.35576626268671,1.00416183829401,0.402829317109147,0,0.488124115096339,0,0,0.357198913136319,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0.841680569770331,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,2.21446636387394,2.80483547606892,0,0,0,0,0,3.5317047953172,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,3.04205544681009,2.37809859661965,0,0,0,0,0,0,0.492663237895943,0.352193736052904,1.24396869324463,1.00883967391873,1.51490920111656,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0,0.256686072559497,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.647142602455851,0.213455115606889,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0,0,0,0.308419387605311,0,0,0.519254429183621,0,0.362578348774867,0,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.732555718546747,0.577566499444116,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23143 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20309 | |||
|TSSclassifier=S | |||
|UniProt=F8W6F0 | |||
|association_with_transcript=-22bp_to_ENST00000389797_5end | |||
|description=CAGE_peak_7_at_LRCH1_5end | |||
|id=chr13:47127361..47127372,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;4.40e-11;2!CL:1000398;4.40e-11;2!CL:0000097;6.69e-09;5!CL:0002541;4.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,4.22e-11,2;CL:1000398,4.22e-11,2;CL:0000097,8.50e-09,5;CL:0002028,8.50e-09,5;CL:0002541,1.98e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.02e-10;2!UBERON:0006215;2.24e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;4.40e-11;2!UBERON:0003497;4.40e-11;2!UBERON:0003909;4.40e-11;2!UBERON:0003835;4.40e-11;2!UBERON:0002370;3.02e-10;2!UBERON:0005058;3.02e-10;2!UBERON:0009113;3.02e-10;2!UBERON:0004177;6.69e-09;5!UBERON:0005057;6.69e-09;5!UBERON:0001280;1.18e-07;3!UBERON:0004647;1.18e-07;3!UBERON:0003124;4.19e-07;3!UBERON:0000920;4.19e-07;3!UBERON:0006947;4.19e-07;3!UBERON:0004054;4.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,4.22e-11,2;UBERON:0003497,4.22e-11,2;UBERON:0003909,4.22e-11,2;UBERON:0003835,4.22e-11,2;UBERON:0001280,1.15e-07,3;UBERON:0004647,1.15e-07,3;UBERON:0005171,1.15e-07,3;UBERON:0000920,1.98e-07,3;UBERON:0006947,2.18e-07,3;UBERON:0004054,2.18e-07,3 | |||
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| |||
|short_description=p7@LRCH1 | |||
}} |
Revision as of 02:25, 11 September 2013
Short description: | p7@LRCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LRCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000389797_5end |
EntrezGene: | LRCH1 |
HGNC: | 20309 |
UniProt: | F8W6F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 4.22e-11 | 2 |
endothelial cell of hepatic sinusoid | 4.22e-11 | 2 |
mast cell | 8.50e-09 | 5 |
basophil mast progenitor cell | 8.50e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 4.22e-11 | 2 |
abdomen blood vessel | 4.22e-11 | 2 |
sinusoid | 4.22e-11 | 2 |
abdominal segment blood vessel | 4.22e-11 | 2 |
liver parenchyma | 1.15e-07 | 3 |
liver lobule | 1.15e-07 | 3 |
hepatic duct | 1.15e-07 | 3 |
egg chorion | 1.98e-07 | 3 |
male genital duct | 2.18e-07 | 3 |
internal male genitalia | 2.18e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.