FFCP PHASE1:Hg19::chr13:46961319..46961328,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80183|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20420|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_ENST00000322896_5end|description=CAGE_peak_7_at_KIAA0226L_5end|id=chr13:46961319..46961328,-|ontology_enrichment_celltype=CL:0000945!4.53e-22!24;CL:0000826!4.53e-22!24;CL:0000236!2.00e-21!14;CL:0000738!1.68e-20!140;CL:0002087!1.12e-17!119;CL:0000037!8.09e-15!172;CL:0000566!8.09e-15!172;CL:0000988!3.08e-14!182;CL:0002031!1.05e-13!124;CL:0002032!1.46e-11!165;CL:0000837!1.46e-11!165;CL:0000766!6.58e-10!76;CL:0000542!5.04e-09!53;CL:0000051!5.04e-09!53;CL:0000838!2.17e-08!52;CL:0002194!2.63e-08!63;CL:0000576!2.63e-08!63;CL:0000040!2.63e-08!63;CL:0000559!2.63e-08!63;CL:0002009!7.72e-08!65;CL:0002057!6.90e-07!42;CL:0000839!8.43e-07!70|ontology_enrichment_celltype_v019=CL:0000236;1.80e-58;13!CL:0000945;9.48e-48;24!CL:0000775;2.24e-17;3!CL:0000094;5.29e-17;8!CL:0000542;2.67e-16;53!CL:0000784;4.27e-16;3!CL:0000081;2.67e-12;11!CL:0000771;1.02e-11;2!CL:0000738;4.55e-07;136|ontology_enrichment_celltype_v019_2=CL:0000236,1.86e-54,14;CL:0000945,4.38e-48,24;CL:0000826,4.38e-48,24;CL:0000738,7.21e-25,136;CL:0000838,2.06e-20,52;CL:0000542,5.78e-20,53;CL:0000051,5.78e-20,53;CL:0000037,4.94e-19,168;CL:0000988,9.06e-18,177;CL:0000775,1.96e-17,3;CL:0000094,4.21e-17,8;CL:0000784,7.81e-16,3;CL:0002032,2.06e-15,161;CL:0000837,2.06e-15,161;CL:0002087,4.25e-14,115;CL:0002031,2.47e-13,120;CL:0000081,2.26e-12,11;CL:0000771,8.06e-12,2|ontology_enrichment_development_v019=CL:0000051;2.67e-16;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;6.91e-13;10|ontology_enrichment_disease_v019_2=DOID:0060058,5.44e-13,10|ontology_enrichment_uberon=UBERON:0007023!6.24e-21!115;UBERON:0002390!9.37e-13!102;UBERON:0003061!9.37e-13!102;UBERON:0002193!3.47e-12!112;UBERON:0001049!4.47e-09!57;UBERON:0005068!4.47e-09!57;UBERON:0006241!4.47e-09!57;UBERON:0007135!4.47e-09!57;UBERON:0000178!6.16e-08!15;UBERON:0000179!6.16e-08!15;UBERON:0000463!6.16e-08!15;UBERON:0001893!7.67e-08!34;UBERON:0002616!1.03e-07!59;UBERON:0002780!2.00e-07!41;UBERON:0001890!2.00e-07!41;UBERON:0006240!2.00e-07!41;UBERON:0002791!3.68e-07!33;UBERON:0003080!3.90e-07!42;UBERON:0001950!4.28e-07!20;UBERON:0002020!9.91e-07!34;UBERON:0003528!9.91e-07!34|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-08;15!UBERON:0000179;1.22e-08;15!UBERON:0000463;1.22e-08;15!UBERON:0002106;7.98e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-08,15;UBERON:0000179,1.42e-08,15;UBERON:0000463,1.42e-08,15;UBERON:0002106,7.72e-08,3;UBERON:0004854,7.72e-08,3;UBERON:0009034,7.72e-08,3;UBERON:0002095,7.72e-08,3;UBERON:0004782,7.72e-08,3;UBERON:0003281,7.72e-08,3;UBERON:0009664,7.72e-08,3;UBERON:0002296,7.72e-08,3;UBERON:0005602,7.72e-08,3;UBERON:0001179,7.72e-08,3;UBERON:0006293,7.72e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,2.16908161624845,1.27952309238679,0.293600439334847,0,0,0,0.671746422719773,0.32389366601898,1.28787783817093,0.290796477559129,0,0,0.464858073811369,0,0.929119112685311,0,0,0,0,0,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.641858054152187,0.639337125799041,0,0.199463657621632,0,1.7412554317715,0.56738522469114,1.24564449799115,0,0,0,0,0.736555271975129,0.949387162322653,0.211255286311942,0,0.209658645508376,0,0,0.48217676009124,0,0.19891667719909,0.182664153764634,1.75996244461323,6.55366333514558,2.66852776159066,4.26730222566507,4.80475184443215,6.32227683949932,4.62731410949403,1.90810750907073,3.41527781465669,4.11066032559657,3.05818582500183,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,1.19245312152671,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,5.9832291840805,3.72973962092432,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,1.01489521846434,3.0585488285695,0,1.90585420366231,2.0568113654309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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20420 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000322896_5end | |||
|description=CAGE_peak_7_at_KIAA0226L_5end | |||
|id=chr13:46961319..46961328,- | |||
|ontology_enrichment_celltype=CL:0000945!4.53e-22!24;CL:0000826!4.53e-22!24;CL:0000236!2.00e-21!14;CL:0000738!1.68e-20!140;CL:0002087!1.12e-17!119;CL:0000037!8.09e-15!172;CL:0000566!8.09e-15!172;CL:0000988!3.08e-14!182;CL:0002031!1.05e-13!124;CL:0002032!1.46e-11!165;CL:0000837!1.46e-11!165;CL:0000766!6.58e-10!76;CL:0000542!5.04e-09!53;CL:0000051!5.04e-09!53;CL:0000838!2.17e-08!52;CL:0002194!2.63e-08!63;CL:0000576!2.63e-08!63;CL:0000040!2.63e-08!63;CL:0000559!2.63e-08!63;CL:0002009!7.72e-08!65;CL:0002057!6.90e-07!42;CL:0000839!8.43e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.80e-58;13!CL:0000945;9.48e-48;24!CL:0000775;2.24e-17;3!CL:0000094;5.29e-17;8!CL:0000542;2.67e-16;53!CL:0000784;4.27e-16;3!CL:0000081;2.67e-12;11!CL:0000771;1.02e-11;2!CL:0000738;4.55e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.86e-54,14;CL:0000945,4.38e-48,24;CL:0000826,4.38e-48,24;CL:0000738,7.21e-25,136;CL:0000838,2.06e-20,52;CL:0000542,5.78e-20,53;CL:0000051,5.78e-20,53;CL:0000037,4.94e-19,168;CL:0000988,9.06e-18,177;CL:0000775,1.96e-17,3;CL:0000094,4.21e-17,8;CL:0000784,7.81e-16,3;CL:0002032,2.06e-15,161;CL:0000837,2.06e-15,161;CL:0002087,4.25e-14,115;CL:0002031,2.47e-13,120;CL:0000081,2.26e-12,11;CL:0000771,8.06e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.67e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.91e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.44e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.24e-21!115;UBERON:0002390!9.37e-13!102;UBERON:0003061!9.37e-13!102;UBERON:0002193!3.47e-12!112;UBERON:0001049!4.47e-09!57;UBERON:0005068!4.47e-09!57;UBERON:0006241!4.47e-09!57;UBERON:0007135!4.47e-09!57;UBERON:0000178!6.16e-08!15;UBERON:0000179!6.16e-08!15;UBERON:0000463!6.16e-08!15;UBERON:0001893!7.67e-08!34;UBERON:0002616!1.03e-07!59;UBERON:0002780!2.00e-07!41;UBERON:0001890!2.00e-07!41;UBERON:0006240!2.00e-07!41;UBERON:0002791!3.68e-07!33;UBERON:0003080!3.90e-07!42;UBERON:0001950!4.28e-07!20;UBERON:0002020!9.91e-07!34;UBERON:0003528!9.91e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-08;15!UBERON:0000179;1.22e-08;15!UBERON:0000463;1.22e-08;15!UBERON:0002106;7.98e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-08,15;UBERON:0000179,1.42e-08,15;UBERON:0000463,1.42e-08,15;UBERON:0002106,7.72e-08,3;UBERON:0004854,7.72e-08,3;UBERON:0009034,7.72e-08,3;UBERON:0002095,7.72e-08,3;UBERON:0004782,7.72e-08,3;UBERON:0003281,7.72e-08,3;UBERON:0009664,7.72e-08,3;UBERON:0002296,7.72e-08,3;UBERON:0005602,7.72e-08,3;UBERON:0001179,7.72e-08,3;UBERON:0006293,7.72e-08,3 | |||
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|short_description=p7@KIAA0226L | |||
}} |
Revision as of 02:25, 11 September 2013
Short description: | p7@KIAA0226L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KIAA0226L_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000322896_5end |
EntrezGene: | KIAA0226L |
HGNC: | 20420 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.86e-54 | 14 |
lymphocyte of B lineage | 4.38e-48 | 24 |
pro-B cell | 4.38e-48 | 24 |
leukocyte | 7.21e-25 | 136 |
lymphoid lineage restricted progenitor cell | 2.06e-20 | 52 |
lymphocyte | 5.78e-20 | 53 |
common lymphoid progenitor | 5.78e-20 | 53 |
hematopoietic stem cell | 4.94e-19 | 168 |
hematopoietic cell | 9.06e-18 | 177 |
neutrophil | 1.96e-17 | 3 |
granulocyte | 4.21e-17 | 8 |
plasmacytoid dendritic cell | 7.81e-16 | 3 |
hematopoietic oligopotent progenitor cell | 2.06e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-15 | 161 |
nongranular leukocyte | 4.25e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.47e-13 | 120 |
blood cell | 2.26e-12 | 11 |
eosinophil | 8.06e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.42e-08 | 15 |
haemolymphatic fluid | 1.42e-08 | 15 |
organism substance | 1.42e-08 | 15 |
spleen | 7.72e-08 | 3 |
gastrointestinal system mesentery | 7.72e-08 | 3 |
stomach region | 7.72e-08 | 3 |
mesentery | 7.72e-08 | 3 |
gastrointestinal system serosa | 7.72e-08 | 3 |
mesentery of stomach | 7.72e-08 | 3 |
gut mesentery | 7.72e-08 | 3 |
dorsal mesentery | 7.72e-08 | 3 |
dorsal mesogastrium | 7.72e-08 | 3 |
peritoneal cavity | 7.72e-08 | 3 |
spleen primordium | 7.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.44e-13 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.