FFCP PHASE1:Hg19::chr13:28963280..28963284,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C50|description=CAGE_peak_at_chr13:28963280..28963284,-|id=chr13:28963280..28963284,-|ontology_enrichment_celltype=CL:0002057!4.05e-12!42;CL:0000860!1.02e-10!45;CL:0002194!6.50e-08!63;CL:0000576!6.50e-08!63;CL:0000040!6.50e-08!63;CL:0000559!6.50e-08!63;CL:0002009!2.09e-07!65;CL:0002139!4.99e-07!24|ontology_enrichment_celltype_v019=CL:0000860;5.50e-29;33!CL:0002057;5.50e-29;33!CL:0000473;2.01e-20;39!CL:0000234;2.01e-20;39!CL:0000576;1.03e-12;48!CL:0002541;3.34e-12;3!CL:0002545;2.53e-08;2!CL:0000766;6.01e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,7.35e-24,42;CL:0002057,7.35e-24,42;CL:0000473,2.70e-20,48;CL:0000234,2.70e-20,48;CL:0002194,2.54e-15,59;CL:0000576,2.54e-15,59;CL:0000040,2.54e-15,59;CL:0000559,2.54e-15,59;CL:0002009,1.11e-14,61;CL:0000839,2.97e-13,66;CL:0000557,5.41e-13,67;CL:0002541,3.61e-12,3;CL:0000766,8.40e-12,72;CL:0002545,2.88e-08,2|ontology_enrichment_development_v019=CL:0002057;4.21e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.75e-21!115;UBERON:0001049!2.64e-09!57;UBERON:0005068!2.64e-09!57;UBERON:0006241!2.64e-09!57;UBERON:0007135!2.64e-09!57;UBERON:0003075!8.40e-09!86;UBERON:0007284!8.40e-09!86;UBERON:0002346!6.43e-08!90;UBERON:0002616!2.12e-07!59;UBERON:0005743!2.70e-07!86;UBERON:0001017!3.92e-07!82;UBERON:0002298!5.65e-07!8;UBERON:0003080!9.87e-07!42|ontology_enrichment_uberon_v019=UBERON:0003124;3.34e-12;3!UBERON:0000920;3.34e-12;3!UBERON:0005800;2.53e-08;2!UBERON:0001515;2.53e-08;2!UBERON:0000478;9.74e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.61e-12,3;UBERON:0001474,4.37e-11,82;UBERON:0002371,5.80e-11,76;UBERON:0004765,1.03e-09,90;UBERON:0003081,2.66e-09,203;UBERON:0003124,5.70e-09,7;UBERON:0001434,2.58e-08,100;UBERON:0005800,2.88e-08,2;UBERON:0001515,2.88e-08,2;UBERON:0002405,3.23e-08,93;UBERON:0002390,1.35e-07,98;UBERON:0003061,1.35e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,2.47765096716083,1.1507695692886,2.30544635876191,1.41889337933151,2.41321976515633,4.51839278508678,6.77132432971709,0.188242339542605,0.545812300115692,0.224723484445085,3.36692281607993,0,3.19668562899521,0.329851300186716,0.398927315243264,0.426224750532694,4.35313857942876,2.26954089876456,7.4738669879469,3.01498398308092,3.12889751052121,2.38907729175628,4.23779651843358,2.94622108790052,7.91155968602211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,1.25849830862972,4.40188867104108,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0,2.20597848207521,3.24056779152704,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06834745212444,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0.946214490203608,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0,4.84292754744295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,1.12678241012897,0,0.687743287091848,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0.635020748171649,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,11.4597352674091,0,0,0,0.844016498463076,0,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0,0.38475129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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr13:28963280..28963284,- | |||
|id=chr13:28963280..28963284,- | |||
|ontology_enrichment_celltype=CL:0002057!4.05e-12!42;CL:0000860!1.02e-10!45;CL:0002194!6.50e-08!63;CL:0000576!6.50e-08!63;CL:0000040!6.50e-08!63;CL:0000559!6.50e-08!63;CL:0002009!2.09e-07!65;CL:0002139!4.99e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.50e-29;33!CL:0002057;5.50e-29;33!CL:0000473;2.01e-20;39!CL:0000234;2.01e-20;39!CL:0000576;1.03e-12;48!CL:0002541;3.34e-12;3!CL:0002545;2.53e-08;2!CL:0000766;6.01e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.35e-24,42;CL:0002057,7.35e-24,42;CL:0000473,2.70e-20,48;CL:0000234,2.70e-20,48;CL:0002194,2.54e-15,59;CL:0000576,2.54e-15,59;CL:0000040,2.54e-15,59;CL:0000559,2.54e-15,59;CL:0002009,1.11e-14,61;CL:0000839,2.97e-13,66;CL:0000557,5.41e-13,67;CL:0002541,3.61e-12,3;CL:0000766,8.40e-12,72;CL:0002545,2.88e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-21!115;UBERON:0001049!2.64e-09!57;UBERON:0005068!2.64e-09!57;UBERON:0006241!2.64e-09!57;UBERON:0007135!2.64e-09!57;UBERON:0003075!8.40e-09!86;UBERON:0007284!8.40e-09!86;UBERON:0002346!6.43e-08!90;UBERON:0002616!2.12e-07!59;UBERON:0005743!2.70e-07!86;UBERON:0001017!3.92e-07!82;UBERON:0002298!5.65e-07!8;UBERON:0003080!9.87e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.34e-12;3!UBERON:0000920;3.34e-12;3!UBERON:0005800;2.53e-08;2!UBERON:0001515;2.53e-08;2!UBERON:0000478;9.74e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.61e-12,3;UBERON:0001474,4.37e-11,82;UBERON:0002371,5.80e-11,76;UBERON:0004765,1.03e-09,90;UBERON:0003081,2.66e-09,203;UBERON:0003124,5.70e-09,7;UBERON:0001434,2.58e-08,100;UBERON:0005800,2.88e-08,2;UBERON:0001515,2.88e-08,2;UBERON:0002405,3.23e-08,93;UBERON:0002390,1.35e-07,98;UBERON:0003061,1.35e-07,98 | |||
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| |||
|short_description=p@chr13:28963280..28963284,- | |||
}} |
Revision as of 01:55, 11 September 2013
Short description: | p@chr13:28963280..28963284, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:28963280..28963284, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.35e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.35e-24 | 42 |
defensive cell | 2.70e-20 | 48 |
phagocyte | 2.70e-20 | 48 |
monopoietic cell | 2.54e-15 | 59 |
monocyte | 2.54e-15 | 59 |
monoblast | 2.54e-15 | 59 |
promonocyte | 2.54e-15 | 59 |
macrophage dendritic cell progenitor | 1.11e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.97e-13 | 66 |
granulocyte monocyte progenitor cell | 5.41e-13 | 67 |
chorionic membrane mesenchymal stem cell | 3.61e-12 | 3 |
myeloid leukocyte | 8.40e-12 | 72 |
thoracic aorta endothelial cell | 2.88e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.61e-12 | 3 |
bone element | 4.37e-11 | 82 |
bone marrow | 5.80e-11 | 76 |
skeletal element | 1.03e-09 | 90 |
lateral plate mesoderm | 2.66e-09 | 203 |
chorion | 5.70e-09 | 7 |
skeletal system | 2.58e-08 | 100 |
segment of aorta | 2.88e-08 | 2 |
thoracic aorta | 2.88e-08 | 2 |
immune system | 3.23e-08 | 93 |
hematopoietic system | 1.35e-07 | 98 |
blood island | 1.35e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.