FFCP PHASE1:Hg19::chr12:91572389..91572404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1634|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2705|TSSclassifier=S|UniProt=|association_with_transcript=18bp_to_uc001tbs.2_5end|coexpression_cluster_id=C540|description=CAGE_peak_14_at_DCN_5end|id=chr12:91572389..91572404,-|ontology_enrichment_celltype=CL:0000057!1.62e-10!75;CL:0000136!5.08e-09!15;CL:0000153!4.30e-08!9;CL:0000447!4.30e-08!9;CL:0000499!1.22e-07!27;CL:0002334!3.36e-07!12;CL:0000055!6.56e-07!180|ontology_enrichment_celltype_v019=CL:0000135;1.07e-11;3!CL:0000388;1.07e-11;3!CL:0000499;6.28e-09;28|ontology_enrichment_celltype_v019_2=CL:0000135,6.48e-12,3;CL:0000388,6.48e-12,3;CL:0000499,4.05e-09,28;CL:0000153,9.55e-07,9;CL:0000447,9.55e-07,9|ontology_enrichment_development_v019=UBERON:0007297;2.97e-08;2!UBERON:0006965;1.10e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.53e-11!115;UBERON:0004457!5.33e-08!12;UBERON:0000042!5.33e-08!12;UBERON:0003688!3.49e-07!6;UBERON:0002358!3.49e-07!6;UBERON:0003684!3.49e-07!6;UBERON:0001178!3.49e-07!6;UBERON:0007100!4.45e-07!27|ontology_enrichment_uberon_v019=UBERON:0005904;3.01e-14;4!UBERON:0007846;1.07e-11;3!UBERON:0000043;1.07e-11;3!UBERON:0007845;1.07e-11;3!UBERON:0003101;2.22e-11;22!UBERON:0000079;2.22e-11;22!UBERON:0006947;2.95e-11;3!UBERON:0004054;2.95e-11;3!UBERON:0005406;4.73e-08;2!UBERON:0003135;7.92e-08;11!UBERON:0003937;4.53e-07;12!UBERON:0005399;4.53e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0005904,2.21e-14,4;UBERON:0007846,6.48e-12,3;UBERON:0000043,6.48e-12,3;UBERON:0007845,6.48e-12,3;UBERON:0003101,1.94e-11,22;UBERON:0000079,1.94e-11,22;UBERON:0006947,2.72e-11,3;UBERON:0004054,2.72e-11,3;UBERON:0005406,3.70e-08,2;UBERON:0004122,6.39e-08,15;UBERON:0003135,7.00e-08,11;UBERON:0005156,2.63e-07,59;UBERON:0000990,2.63e-07,59;UBERON:0003937,4.58e-07,12;UBERON:0005399,4.58e-07,12;UBERON:0003064,7.72e-07,28|phase1_expression=0.54503513781167,1.07050261945492,0.704772020479856,2.00146596706261,0.893922188854576,2.61701557230111,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,3.2529523714611,0.50133791063589,5.35932120155048,0.795285947051099,1.94653948121054,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.264818361626438,2.29469296599051,0,1.12135520028461,0,0,0.933633106199299,0.134710672069688,0.490385709340376,0.756787138224657,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.567160915800105,0.179389635688862,1.06778694409284,0.635795703478686,0,0.515262646192195,0.257640540045629,0.37223371266318,0.337552664482532,0,0.252433774244115,2.02509777013059,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.285955987316295,1.08524321078289,0.823240336780769,0.325736184293735,0.710783897485092,0,0.904318131178758,0,0,0,0,0,0.239624855491583,1.14861935834114,0,3.61953266668948,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,0.460385919864187,0.561320188866147,0.512556597022804,2.04682899626681,0.804269605718038,1.48418066444991,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0,0,2.18147451512753,0.546273504020151,2.62248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,1.6068392984416,0,0,0.307007349452259,0.137836572484531,0.429680979473094,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,1.64722217841633,0.353437207037059,0,0,0,0,0,0,0.136499911407986,1.27264888758341,0,0,0,0,0,0.655894752046633,0,0,0,0,0.294747123039363,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0,0.311039587661807,0,0,0,2.07151151837561,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,1.23120413606075,0.341826167541004,0,0,0,1.91400695839152,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0.296521128680622,0,0,0.067401132980677,2.40773294189637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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1634 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2705 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_uc001tbs.2_5end | |||
|coexpression_cluster_id=C540 | |||
|description=CAGE_peak_14_at_DCN_5end | |||
|id=chr12:91572389..91572404,- | |||
|ontology_enrichment_celltype=CL:0000057!1.62e-10!75;CL:0000136!5.08e-09!15;CL:0000153!4.30e-08!9;CL:0000447!4.30e-08!9;CL:0000499!1.22e-07!27;CL:0002334!3.36e-07!12;CL:0000055!6.56e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.07e-11;3!CL:0000388;1.07e-11;3!CL:0000499;6.28e-09;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,6.48e-12,3;CL:0000388,6.48e-12,3;CL:0000499,4.05e-09,28;CL:0000153,9.55e-07,9;CL:0000447,9.55e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.97e-08;2!UBERON:0006965;1.10e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.53e-11!115;UBERON:0004457!5.33e-08!12;UBERON:0000042!5.33e-08!12;UBERON:0003688!3.49e-07!6;UBERON:0002358!3.49e-07!6;UBERON:0003684!3.49e-07!6;UBERON:0001178!3.49e-07!6;UBERON:0007100!4.45e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;3.01e-14;4!UBERON:0007846;1.07e-11;3!UBERON:0000043;1.07e-11;3!UBERON:0007845;1.07e-11;3!UBERON:0003101;2.22e-11;22!UBERON:0000079;2.22e-11;22!UBERON:0006947;2.95e-11;3!UBERON:0004054;2.95e-11;3!UBERON:0005406;4.73e-08;2!UBERON:0003135;7.92e-08;11!UBERON:0003937;4.53e-07;12!UBERON:0005399;4.53e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,2.21e-14,4;UBERON:0007846,6.48e-12,3;UBERON:0000043,6.48e-12,3;UBERON:0007845,6.48e-12,3;UBERON:0003101,1.94e-11,22;UBERON:0000079,1.94e-11,22;UBERON:0006947,2.72e-11,3;UBERON:0004054,2.72e-11,3;UBERON:0005406,3.70e-08,2;UBERON:0004122,6.39e-08,15;UBERON:0003135,7.00e-08,11;UBERON:0005156,2.63e-07,59;UBERON:0000990,2.63e-07,59;UBERON:0003937,4.58e-07,12;UBERON:0005399,4.58e-07,12;UBERON:0003064,7.72e-07,28 | |||
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| |||
|short_description=p14@DCN | |||
}} |
Revision as of 00:56, 11 September 2013
Short description: | p14@DCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_DCN_5end |
Coexpression cluster: | C540_tenocyte_Chondrocyte_Adipocyte_normal_Synoviocyte_Fibroblast_heart |
Association with transcript: | 18bp_to_uc001tbs.2_5end |
EntrezGene: | DCN |
HGNC: | 2705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 6.48e-12 | 3 |
tendon cell | 6.48e-12 | 3 |
stromal cell | 4.05e-09 | 28 |
GAG secreting cell | 9.55e-07 | 9 |
carbohydrate secreting cell | 9.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 2.21e-14 | 4 |
dense regular connective tissue | 6.48e-12 | 3 |
tendon | 6.48e-12 | 3 |
regular connective tissue | 6.48e-12 | 3 |
male organism | 1.94e-11 | 22 |
male reproductive system | 1.94e-11 | 22 |
male genital duct | 2.72e-11 | 3 |
internal male genitalia | 2.72e-11 | 3 |
perirenal fat | 3.70e-08 | 2 |
genitourinary system | 6.39e-08 | 15 |
male reproductive organ | 7.00e-08 | 11 |
reproductive structure | 2.63e-07 | 59 |
reproductive system | 2.63e-07 | 59 |
sex gland | 4.58e-07 | 12 |
male reproductive gland | 4.58e-07 | 12 |
intermediate mesoderm | 7.72e-07 | 28 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.