FFCP PHASE1:Hg19::chr12:90024360..90024401,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=490|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=814|TSSclassifier=S|UniProt=P20020|association_with_transcript=22bp_to_M95542_5end|coexpression_cluster_id=C1180|description=CAGE_peak_8_at_ATP2B1_5end|id=chr12:90024360..90024401,-|ontology_enrichment_celltype=CL:0002057!1.73e-19!42;CL:0000860!1.75e-19!45;CL:0002009!2.96e-12!65;CL:0000738!1.20e-11!140;CL:0002194!1.43e-11!63;CL:0000576!1.43e-11!63;CL:0000040!1.43e-11!63;CL:0000559!1.43e-11!63;CL:0000766!3.91e-11!76;CL:0002087!4.20e-11!119;CL:0000557!2.81e-10!71;CL:0002031!1.07e-08!124;CL:0000839!1.80e-08!70;CL:0002032!8.71e-08!165;CL:0000837!8.71e-08!165;CL:0000037!2.09e-07!172;CL:0000566!2.09e-07!172;CL:0000763!4.67e-07!112;CL:0000049!4.67e-07!112|ontology_enrichment_celltype_v019=CL:0000860;5.08e-40;33!CL:0002057;5.08e-40;33!CL:0000473;2.74e-27;39!CL:0000234;2.74e-27;39!CL:0000576;4.56e-21;48!CL:0000766;6.59e-14;69!CL:0000763;1.34e-07;100!CL:0002087;7.91e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,2.23e-39,42;CL:0002057,2.23e-39,42;CL:0000473,1.73e-35,48;CL:0000234,1.73e-35,48;CL:0000766,2.32e-26,72;CL:0002194,2.90e-26,59;CL:0000576,2.90e-26,59;CL:0000040,2.90e-26,59;CL:0000559,2.90e-26,59;CL:0002009,4.43e-25,61;CL:0000557,1.88e-23,67;CL:0000839,1.94e-22,66;CL:0000763,5.06e-18,108;CL:0000049,5.06e-18,108;CL:0000738,2.17e-15,136;CL:0002087,8.17e-15,115;CL:0002031,9.63e-14,120;CL:0002032,2.35e-13,161;CL:0000837,2.35e-13,161;CL:0000037,2.83e-12,168;CL:0000988,5.05e-11,177|ontology_enrichment_development_v019=CL:0002057;7.54e-29;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!1.19e-12!41;UBERON:0001890!1.19e-12!41;UBERON:0006240!1.19e-12!41;UBERON:0003080!5.93e-12!42;UBERON:0002020!4.00e-11!34;UBERON:0003528!4.00e-11!34;UBERON:0001869!6.64e-11!32;UBERON:0001893!7.43e-11!34;UBERON:0002791!1.97e-10!33;UBERON:0001049!2.33e-10!57;UBERON:0005068!2.33e-10!57;UBERON:0006241!2.33e-10!57;UBERON:0007135!2.33e-10!57;UBERON:0002619!9.60e-10!22;UBERON:0002371!5.06e-09!80;UBERON:0002616!1.12e-08!59;UBERON:0001950!1.57e-08!20;UBERON:0001017!3.82e-08!82;UBERON:0000956!6.18e-08!25;UBERON:0000203!6.18e-08!25;UBERON:0000955!1.18e-07!69;UBERON:0006238!1.18e-07!69;UBERON:0001474!1.40e-07!86;UBERON:0005743!2.75e-07!86;UBERON:0002390!5.46e-07!102;UBERON:0003061!5.46e-07!102|ontology_enrichment_uberon_v019=UBERON:0001869;7.65e-15;32!UBERON:0002780;7.27e-14;41!UBERON:0001890;7.27e-14;41!UBERON:0002791;1.79e-13;32!UBERON:0002619;2.36e-13;22!UBERON:0001893;4.24e-12;34!UBERON:0003528;9.23e-12;34!UBERON:0002020;9.23e-12;34!UBERON:0000956;2.25e-11;25!UBERON:0000203;2.25e-11;25!UBERON:0001950;1.12e-10;20!UBERON:0000073;5.18e-09;53!UBERON:0002616;5.18e-09;53!UBERON:0000200;3.32e-08;6!UBERON:0002784;2.34e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.58e-22,76;UBERON:0001474,8.79e-20,82;UBERON:0002780,2.46e-19,41;UBERON:0001890,2.46e-19,41;UBERON:0003080,2.46e-19,41;UBERON:0006240,2.46e-19,41;UBERON:0000073,1.16e-17,53;UBERON:0002616,1.16e-17,53;UBERON:0002405,2.97e-17,93;UBERON:0004765,4.17e-17,90;UBERON:0002390,7.43e-17,98;UBERON:0003061,7.43e-17,98;UBERON:0001049,2.56e-16,56;UBERON:0005068,2.56e-16,56;UBERON:0006241,2.56e-16,56;UBERON:0007135,2.56e-16,56;UBERON:0001869,5.50e-16,32;UBERON:0001434,1.82e-15,100;UBERON:0001893,9.30e-15,34;UBERON:0002791,2.18e-14,32;UBERON:0002193,2.55e-14,108;UBERON:0002619,2.14e-13,22;UBERON:0003528,2.84e-13,34;UBERON:0002020,2.84e-13,34;UBERON:0000955,7.07e-12,68;UBERON:0006238,7.07e-12,68;UBERON:0000956,2.07e-11,25;UBERON:0000203,2.07e-11,25;UBERON:0003056,6.87e-11,61;UBERON:0001950,9.74e-11,20;UBERON:0001017,1.32e-10,81;UBERON:0001016,1.69e-10,89;UBERON:0003075,6.66e-09,82;UBERON:0007284,6.66e-09,82;UBERON:0002346,3.50e-08,86;UBERON:0000200,5.17e-08,6;UBERON:0002204,1.19e-07,167;UBERON:0002784,2.49e-07,4;UBERON:0010371,5.62e-07,104|phase1_expression=0,0.856402095563933,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.154934401160603,0.568676929949686,0,0,6.01633342410425,3.03815219002193,0,0,0,4.36194716338694,4.91238726795452,1.69808842831471,11.3890228083785,9.04569353648017,6.50383378879718,4.60307827715441,3.84241059793651,3.54723344832878,8.27389633767885,5.16387746867061,0,11.4827827120989,4.63940455098338,1.79778787556068,14.6920268338033,4.17207735198922,7.67204550958849,0.989553900560148,3.59034583718937,2.13112375266347,34.5348993968015,7.37600792098482,9.9651559839292,9.79869794501299,16.6874533894464,3.04064382587163,18.7673845816344,5.89244217580104,7.27863491114034,0,0.425208599930087,0.419317291016752,0.44931452458598,0.300353785683013,0.32145117339416,0.570025487482497,1.19350006319454,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0.6610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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=814 | |||
|TSSclassifier=S | |||
|UniProt=P20020 | |||
|association_with_transcript=22bp_to_M95542_5end | |||
|coexpression_cluster_id=C1180 | |||
|description=CAGE_peak_8_at_ATP2B1_5end | |||
|id=chr12:90024360..90024401,- | |||
|ontology_enrichment_celltype=CL:0002057!1.73e-19!42;CL:0000860!1.75e-19!45;CL:0002009!2.96e-12!65;CL:0000738!1.20e-11!140;CL:0002194!1.43e-11!63;CL:0000576!1.43e-11!63;CL:0000040!1.43e-11!63;CL:0000559!1.43e-11!63;CL:0000766!3.91e-11!76;CL:0002087!4.20e-11!119;CL:0000557!2.81e-10!71;CL:0002031!1.07e-08!124;CL:0000839!1.80e-08!70;CL:0002032!8.71e-08!165;CL:0000837!8.71e-08!165;CL:0000037!2.09e-07!172;CL:0000566!2.09e-07!172;CL:0000763!4.67e-07!112;CL:0000049!4.67e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-40;33!CL:0002057;5.08e-40;33!CL:0000473;2.74e-27;39!CL:0000234;2.74e-27;39!CL:0000576;4.56e-21;48!CL:0000766;6.59e-14;69!CL:0000763;1.34e-07;100!CL:0002087;7.91e-07;104 | |||
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|ontology_enrichment_development_v019=CL:0002057;7.54e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p8@ATP2B1 | |||
}} |
Revision as of 00:51, 11 September 2013
Short description: | p8@ATP2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ATP2B1_5end |
Coexpression cluster: | C1180_CD14_mesenchymal_medial_Neutrophils_Myoblast_caudate_parietal |
Association with transcript: | 22bp_to_M95542_5end |
EntrezGene: | ATP2B1 |
HGNC: | 814 |
UniProt: | P20020 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.23e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.23e-39 | 42 |
defensive cell | 1.73e-35 | 48 |
phagocyte | 1.73e-35 | 48 |
myeloid leukocyte | 2.32e-26 | 72 |
monopoietic cell | 2.90e-26 | 59 |
monocyte | 2.90e-26 | 59 |
monoblast | 2.90e-26 | 59 |
promonocyte | 2.90e-26 | 59 |
macrophage dendritic cell progenitor | 4.43e-25 | 61 |
granulocyte monocyte progenitor cell | 1.88e-23 | 67 |
myeloid lineage restricted progenitor cell | 1.94e-22 | 66 |
myeloid cell | 5.06e-18 | 108 |
common myeloid progenitor | 5.06e-18 | 108 |
leukocyte | 2.17e-15 | 136 |
nongranular leukocyte | 8.17e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 9.63e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.35e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.35e-13 | 161 |
hematopoietic stem cell | 2.83e-12 | 168 |
hematopoietic cell | 5.05e-11 | 177 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.