FFCP PHASE1:Hg19::chr12:79611372..79611384,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=72bp_to_AB384875_5end|coexpression_cluster_id=C127|description=CAGE_peak_2_at_AB384875_5end|id=chr12:79611372..79611384,+|ontology_enrichment_celltype=CL:0000242!2.10e-08!2|ontology_enrichment_celltype_v019=CL:0000123;3.06e-12;2!CL:0000242;3.06e-12;2|ontology_enrichment_celltype_v019_2=CL:0000242,2.90e-12,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.07e-23;1!DOID:1357;1.07e-23;1!DOID:5409;6.87e-07;4|ontology_enrichment_disease_v019_2=DOID:0050619,1.07e-23,1;DOID:1357,1.07e-23,1;DOID:5409,6.87e-07,4|ontology_enrichment_uberon=UBERON:0002020!5.20e-46!34;UBERON:0003528!5.20e-46!34;UBERON:0001049!2.73e-45!57;UBERON:0005068!2.73e-45!57;UBERON:0006241!2.73e-45!57;UBERON:0007135!2.73e-45!57;UBERON:0001869!5.39e-45!32;UBERON:0002780!1.29e-44!41;UBERON:0001890!1.29e-44!41;UBERON:0006240!1.29e-44!41;UBERON:0002616!1.63e-43!59;UBERON:0003080!2.03e-43!42;UBERON:0001893!4.42e-42!34;UBERON:0002619!2.57e-39!22;UBERON:0002791!2.66e-39!33;UBERON:0000955!3.83e-38!69;UBERON:0006238!3.83e-38!69;UBERON:0001950!4.15e-38!20;UBERON:0001017!4.69e-38!82;UBERON:0003075!2.41e-36!86;UBERON:0007284!2.41e-36!86;UBERON:0000073!4.46e-36!94;UBERON:0001016!4.46e-36!94;UBERON:0005743!6.36e-36!86;UBERON:0002346!2.33e-34!90;UBERON:0000956!2.91e-34!25;UBERON:0000203!2.91e-34!25;UBERON:0003056!1.95e-30!61;UBERON:0004121!5.13e-23!169;UBERON:0000033!6.66e-23!123;UBERON:0000924!2.89e-22!173;UBERON:0006601!2.89e-22!173;UBERON:0007023!3.71e-22!115;UBERON:0000153!1.86e-21!129;UBERON:0007811!1.86e-21!129;UBERON:0001871!9.91e-16!7;UBERON:0000200!4.59e-15!6;UBERON:0002308!5.44e-13!9;UBERON:0000125!5.44e-13!9;UBERON:0002771!6.39e-12!3;UBERON:0001872!4.23e-11!5;UBERON:0002021!7.34e-11!5;UBERON:0000025!1.13e-10!194;UBERON:0000483!6.58e-10!309;UBERON:0000119!1.02e-09!312;UBERON:0002420!2.52e-09!9;UBERON:0007245!2.52e-09!9;UBERON:0010009!2.52e-09!9;UBERON:0010011!2.52e-09!9;UBERON:0000454!2.52e-09!9;UBERON:0009663!6.20e-08!7;UBERON:0000064!7.83e-08!219;UBERON:0004111!8.50e-08!241;UBERON:0002148!1.14e-07!2;UBERON:0009662!1.14e-07!2;UBERON:0001875!1.14e-07!2;UBERON:0006514!1.14e-07!2;UBERON:0002360!1.31e-07!2;UBERON:0000094!1.31e-07!2;UBERON:0007645!1.31e-07!2;UBERON:0000475!5.81e-07!365;UBERON:0002298!7.98e-07!8;UBERON:0004733!9.67e-07!12;UBERON:0002028!9.67e-07!12;UBERON:0007277!9.67e-07!12|ontology_enrichment_uberon_v019=UBERON:0002771;5.59e-45;2!UBERON:0000200;1.47e-33;6!UBERON:0001764;1.07e-23;1!UBERON:0001825;1.07e-23;1!UBERON:0003112;4.59e-23;1!UBERON:0011158;4.59e-23;1!UBERON:0003128;4.59e-23;1!UBERON:0001703;4.59e-23;1!UBERON:0002241;4.59e-23;1!UBERON:0002619;9.66e-16;22!UBERON:0000956;5.60e-14;25!UBERON:0000203;5.60e-14;25!UBERON:0001871;1.19e-13;6!UBERON:0001954;2.19e-12;2!UBERON:0003022;2.19e-12;2!UBERON:0002421;2.19e-12;2!UBERON:0002600;2.19e-12;2!UBERON:0002702;3.06e-12;2!UBERON:0001950;4.04e-10;20!UBERON:0001893;6.97e-09;34!UBERON:0002791;6.99e-09;32!UBERON:0001869;6.99e-09;32!UBERON:0003528;9.62e-09;34!UBERON:0002020;9.62e-09;34!UBERON:0001870;1.35e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002771,6.26e-45,2;UBERON:0000200,1.83e-33,6;UBERON:0001764,1.07e-23,1;UBERON:0001825,1.07e-23,1;UBERON:0003112,3.28e-23,1;UBERON:0011158,3.28e-23,1;UBERON:0003128,3.28e-23,1;UBERON:0001703,3.28e-23,1;UBERON:0002241,3.28e-23,1;UBERON:0004761,3.28e-23,1;UBERON:0009617,3.28e-23,1;UBERON:0002619,1.02e-15,22;UBERON:0000956,5.90e-14,25;UBERON:0000203,5.90e-14,25;UBERON:0001871,1.23e-13,6;UBERON:0001954,2.07e-12,2;UBERON:0003022,2.07e-12,2;UBERON:0002421,2.07e-12,2;UBERON:0002600,2.07e-12,2;UBERON:0005253,2.59e-12,2;UBERON:0002702,3.62e-12,2;UBERON:0002791,4.39e-11,32;UBERON:0001869,4.39e-11,32;UBERON:0003528,1.79e-10,34;UBERON:0002020,1.79e-10,34;UBERON:0001893,1.79e-10,34;UBERON:0001950,4.30e-10,20;UBERON:0002780,8.67e-09,41;UBERON:0001890,8.67e-09,41;UBERON:0003080,8.67e-09,41;UBERON:0006240,8.67e-09,41;UBERON:0001870,1.51e-08,3;UBERON:0000073,6.62e-07,53;UBERON:0002616,6.62e-07,53|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=72bp_to_AB384875_5end | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_2_at_AB384875_5end | |||
|id=chr12:79611372..79611384,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.10e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.06e-12;2!CL:0000242;3.06e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.90e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.07e-23;1!DOID:1357;1.07e-23;1!DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.07e-23,1;DOID:1357,1.07e-23,1;DOID:5409,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002020!5.20e-46!34;UBERON:0003528!5.20e-46!34;UBERON:0001049!2.73e-45!57;UBERON:0005068!2.73e-45!57;UBERON:0006241!2.73e-45!57;UBERON:0007135!2.73e-45!57;UBERON:0001869!5.39e-45!32;UBERON:0002780!1.29e-44!41;UBERON:0001890!1.29e-44!41;UBERON:0006240!1.29e-44!41;UBERON:0002616!1.63e-43!59;UBERON:0003080!2.03e-43!42;UBERON:0001893!4.42e-42!34;UBERON:0002619!2.57e-39!22;UBERON:0002791!2.66e-39!33;UBERON:0000955!3.83e-38!69;UBERON:0006238!3.83e-38!69;UBERON:0001950!4.15e-38!20;UBERON:0001017!4.69e-38!82;UBERON:0003075!2.41e-36!86;UBERON:0007284!2.41e-36!86;UBERON:0000073!4.46e-36!94;UBERON:0001016!4.46e-36!94;UBERON:0005743!6.36e-36!86;UBERON:0002346!2.33e-34!90;UBERON:0000956!2.91e-34!25;UBERON:0000203!2.91e-34!25;UBERON:0003056!1.95e-30!61;UBERON:0004121!5.13e-23!169;UBERON:0000033!6.66e-23!123;UBERON:0000924!2.89e-22!173;UBERON:0006601!2.89e-22!173;UBERON:0007023!3.71e-22!115;UBERON:0000153!1.86e-21!129;UBERON:0007811!1.86e-21!129;UBERON:0001871!9.91e-16!7;UBERON:0000200!4.59e-15!6;UBERON:0002308!5.44e-13!9;UBERON:0000125!5.44e-13!9;UBERON:0002771!6.39e-12!3;UBERON:0001872!4.23e-11!5;UBERON:0002021!7.34e-11!5;UBERON:0000025!1.13e-10!194;UBERON:0000483!6.58e-10!309;UBERON:0000119!1.02e-09!312;UBERON:0002420!2.52e-09!9;UBERON:0007245!2.52e-09!9;UBERON:0010009!2.52e-09!9;UBERON:0010011!2.52e-09!9;UBERON:0000454!2.52e-09!9;UBERON:0009663!6.20e-08!7;UBERON:0000064!7.83e-08!219;UBERON:0004111!8.50e-08!241;UBERON:0002148!1.14e-07!2;UBERON:0009662!1.14e-07!2;UBERON:0001875!1.14e-07!2;UBERON:0006514!1.14e-07!2;UBERON:0002360!1.31e-07!2;UBERON:0000094!1.31e-07!2;UBERON:0007645!1.31e-07!2;UBERON:0000475!5.81e-07!365;UBERON:0002298!7.98e-07!8;UBERON:0004733!9.67e-07!12;UBERON:0002028!9.67e-07!12;UBERON:0007277!9.67e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.59e-45;2!UBERON:0000200;1.47e-33;6!UBERON:0001764;1.07e-23;1!UBERON:0001825;1.07e-23;1!UBERON:0003112;4.59e-23;1!UBERON:0011158;4.59e-23;1!UBERON:0003128;4.59e-23;1!UBERON:0001703;4.59e-23;1!UBERON:0002241;4.59e-23;1!UBERON:0002619;9.66e-16;22!UBERON:0000956;5.60e-14;25!UBERON:0000203;5.60e-14;25!UBERON:0001871;1.19e-13;6!UBERON:0001954;2.19e-12;2!UBERON:0003022;2.19e-12;2!UBERON:0002421;2.19e-12;2!UBERON:0002600;2.19e-12;2!UBERON:0002702;3.06e-12;2!UBERON:0001950;4.04e-10;20!UBERON:0001893;6.97e-09;34!UBERON:0002791;6.99e-09;32!UBERON:0001869;6.99e-09;32!UBERON:0003528;9.62e-09;34!UBERON:0002020;9.62e-09;34!UBERON:0001870;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,6.26e-45,2;UBERON:0000200,1.83e-33,6;UBERON:0001764,1.07e-23,1;UBERON:0001825,1.07e-23,1;UBERON:0003112,3.28e-23,1;UBERON:0011158,3.28e-23,1;UBERON:0003128,3.28e-23,1;UBERON:0001703,3.28e-23,1;UBERON:0002241,3.28e-23,1;UBERON:0004761,3.28e-23,1;UBERON:0009617,3.28e-23,1;UBERON:0002619,1.02e-15,22;UBERON:0000956,5.90e-14,25;UBERON:0000203,5.90e-14,25;UBERON:0001871,1.23e-13,6;UBERON:0001954,2.07e-12,2;UBERON:0003022,2.07e-12,2;UBERON:0002421,2.07e-12,2;UBERON:0002600,2.07e-12,2;UBERON:0005253,2.59e-12,2;UBERON:0002702,3.62e-12,2;UBERON:0002791,4.39e-11,32;UBERON:0001869,4.39e-11,32;UBERON:0003528,1.79e-10,34;UBERON:0002020,1.79e-10,34;UBERON:0001893,1.79e-10,34;UBERON:0001950,4.30e-10,20;UBERON:0002780,8.67e-09,41;UBERON:0001890,8.67e-09,41;UBERON:0003080,8.67e-09,41;UBERON:0006240,8.67e-09,41;UBERON:0001870,1.51e-08,3;UBERON:0000073,6.62e-07,53;UBERON:0002616,6.62e-07,53 | |||
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|short_description=p2@AB384875 | |||
}} |
Revision as of 00:34, 11 September 2013
Short description: | p2@AB384875 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AB384875_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 72bp_to_AB384875_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 6.26e-45 | 2 |
gyrus | 1.83e-33 | 6 |
maxillary sinus | 1.07e-23 | 1 |
paranasal sinus | 1.07e-23 | 1 |
olfactory region | 3.28e-23 | 1 |
primary subdivision of skull | 3.28e-23 | 1 |
cranium | 3.28e-23 | 1 |
neurocranium | 3.28e-23 | 1 |
chondrocranium | 3.28e-23 | 1 |
cartilaginous neurocranium | 3.28e-23 | 1 |
head paraxial mesoderm | 3.28e-23 | 1 |
regional part of cerebral cortex | 1.02e-15 | 22 |
cerebral cortex | 5.90e-14 | 25 |
pallium | 5.90e-14 | 25 |
temporal lobe | 1.23e-13 | 6 |
Ammon's horn | 2.07e-12 | 2 |
lobe parts of cerebral cortex | 2.07e-12 | 2 |
hippocampal formation | 2.07e-12 | 2 |
limbic lobe | 2.07e-12 | 2 |
head mesenchyme | 2.59e-12 | 2 |
middle frontal gyrus | 3.62e-12 | 2 |
regional part of telencephalon | 4.39e-11 | 32 |
cerebral hemisphere | 4.39e-11 | 32 |
brain grey matter | 1.79e-10 | 34 |
gray matter | 1.79e-10 | 34 |
telencephalon | 1.79e-10 | 34 |
neocortex | 4.30e-10 | 20 |
regional part of forebrain | 8.67e-09 | 41 |
forebrain | 8.67e-09 | 41 |
anterior neural tube | 8.67e-09 | 41 |
future forebrain | 8.67e-09 | 41 |
frontal cortex | 1.51e-08 | 3 |
regional part of nervous system | 6.62e-07 | 53 |
regional part of brain | 6.62e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.07e-23 | 1 |
maxillary sinus cancer | 1.07e-23 | 1 |
lung small cell carcinoma | 6.87e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.