FFCP PHASE1:Hg19::chr12:7068461..7068466,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9658|TSSclassifier=S|UniProt=|association_with_transcript=-18bp_to_ENST00000539029_5end|description=CAGE_peak_19_at_PTPN6_5end|id=chr12:7068461..7068466,+|ontology_enrichment_celltype=CL:0002031!4.90e-23!124;CL:0000738!5.94e-21!140;CL:0000988!7.14e-20!182;CL:0002087!1.33e-19!119;CL:0000037!4.78e-19!172;CL:0000566!4.78e-19!172;CL:0002032!7.46e-19!165;CL:0000837!7.46e-19!165;CL:0000838!5.63e-13!52;CL:0002057!6.08e-13!42;CL:0000542!1.17e-12!53;CL:0000051!1.17e-12!53;CL:0000860!7.37e-12!45;CL:0000557!6.91e-11!71;CL:0000875!1.23e-10!3;CL:0002396!1.23e-10!3;CL:0000839!9.64e-10!70;CL:0002009!1.67e-09!65;CL:0000766!1.12e-08!76;CL:0002194!1.38e-08!63;CL:0000576!1.38e-08!63;CL:0000040!1.38e-08!63;CL:0000559!1.38e-08!63;CL:0000763!5.84e-08!112;CL:0000049!5.84e-08!112;CL:0000084!1.88e-07!25;CL:0000827!1.88e-07!25|ontology_enrichment_celltype_v019=CL:0000945;3.97e-12;24!CL:0000542;3.02e-09;53|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24|ontology_enrichment_development_v019=CL:0000051;3.02e-09;53|ontology_enrichment_disease=DOID:0060058!2.05e-11!10;DOID:2531!3.19e-11!51;DOID:0060083!3.19e-11!51|ontology_enrichment_disease_v019=DOID:1036;1.35e-09;8|ontology_enrichment_disease_v019_2=DOID:1036,1.47e-09,8|ontology_enrichment_uberon=UBERON:0002390!1.98e-15!102;UBERON:0003061!1.98e-15!102;UBERON:0002193!1.73e-13!112;UBERON:0002371!1.76e-10!80;UBERON:0002405!1.24e-09!115;UBERON:0001474!1.90e-09!86;UBERON:0004177!1.13e-07!7;UBERON:0004765!2.03e-07!101;UBERON:0001434!2.03e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.23150884174919,0.944529375764151,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.284567373393656,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p19@PTPN6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9658 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000539029_5end | |||
|description=CAGE_peak_19_at_PTPN6_5end | |||
|id=chr12:7068461..7068466,+ | |||
|ontology_enrichment_celltype=CL:0002031!4.90e-23!124;CL:0000738!5.94e-21!140;CL:0000988!7.14e-20!182;CL:0002087!1.33e-19!119;CL:0000037!4.78e-19!172;CL:0000566!4.78e-19!172;CL:0002032!7.46e-19!165;CL:0000837!7.46e-19!165;CL:0000838!5.63e-13!52;CL:0002057!6.08e-13!42;CL:0000542!1.17e-12!53;CL:0000051!1.17e-12!53;CL:0000860!7.37e-12!45;CL:0000557!6.91e-11!71;CL:0000875!1.23e-10!3;CL:0002396!1.23e-10!3;CL:0000839!9.64e-10!70;CL:0002009!1.67e-09!65;CL:0000766!1.12e-08!76;CL:0002194!1.38e-08!63;CL:0000576!1.38e-08!63;CL:0000040!1.38e-08!63;CL:0000559!1.38e-08!63;CL:0000763!5.84e-08!112;CL:0000049!5.84e-08!112;CL:0000084!1.88e-07!25;CL:0000827!1.88e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.97e-12;24!CL:0000542;3.02e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000051;3.02e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.05e-11!10;DOID:2531!3.19e-11!51;DOID:0060083!3.19e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.35e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.47e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.98e-15!102;UBERON:0003061!1.98e-15!102;UBERON:0002193!1.73e-13!112;UBERON:0002371!1.76e-10!80;UBERON:0002405!1.24e-09!115;UBERON:0001474!1.90e-09!86;UBERON:0004177!1.13e-07!7;UBERON:0004765!2.03e-07!101;UBERON:0001434!2.03e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.23150884174919,0.944529375764151,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.284567373393656,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p19@PTPN6 | |||
}} |
Revision as of 00:17, 11 September 2013
Short description: | p19@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_PTPN6_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000539029_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.77e-12 | 52 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.47e-09 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.