FFCP PHASE1:Hg19::chr12:67251332..67251336,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:67251332..67251336,-|id=chr12:67251332..67251336,-|ontology_enrichment_celltype=CL:0000047!3.60e-07!8|ontology_enrichment_celltype_v019=CL:0000167;5.53e-10;1!CL:0000164;5.53e-10;1!CL:0000502;5.53e-10;1!CL:0000172;5.53e-10;1!CL:0000173;5.53e-10;1|ontology_enrichment_celltype_v019_2=CL:0000047,1.57e-10,8;CL:0000167,8.99e-10,1;CL:0000164,8.99e-10,1;CL:0000502,8.99e-10,1;CL:0000172,8.99e-10,1;CL:0000173,8.99e-10,1;CL:0002351,8.99e-10,1;CL:0000540,9.15e-07,6;CL:0000031,9.15e-07,6;CL:0000404,9.15e-07,6|ontology_enrichment_development_v019=UBERON:0005754;1.80e-10;1!CL:0002351;5.53e-10;1!UBERON:0003124;5.53e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;2.16e-10;1!DOID:10165;2.16e-10;1!DOID:1798;2.16e-10;1!DOID:4430;5.53e-10;1!DOID:170;8.50e-07;6|ontology_enrichment_disease_v019_2=DOID:1799,1.98e-10,1;DOID:10165,1.98e-10,1;DOID:1798,1.98e-10,1;DOID:4430,8.99e-10,1;DOID:170,8.39e-07,6|ontology_enrichment_uberon=UBERON:0002020!8.01e-18!34;UBERON:0003528!8.01e-18!34;UBERON:0001017!2.38e-17!82;UBERON:0001869!3.60e-16!32;UBERON:0001893!6.00e-16!34;UBERON:0005743!7.64e-16!86;UBERON:0002791!2.26e-15!33;UBERON:0001049!5.03e-15!57;UBERON:0005068!5.03e-15!57;UBERON:0006241!5.03e-15!57;UBERON:0007135!5.03e-15!57;UBERON:0000073!1.21e-14!94;UBERON:0001016!1.21e-14!94;UBERON:0002780!3.74e-14!41;UBERON:0001890!3.74e-14!41;UBERON:0006240!3.74e-14!41;UBERON:0003080!1.33e-13!42;UBERON:0002346!2.02e-12!90;UBERON:0000956!2.58e-12!25;UBERON:0000203!2.58e-12!25;UBERON:0000955!2.96e-12!69;UBERON:0006238!2.96e-12!69;UBERON:0002616!3.37e-12!59;UBERON:0002619!4.08e-12!22;UBERON:0003075!4.41e-12!86;UBERON:0007284!4.41e-12!86;UBERON:0007023!8.29e-12!115;UBERON:0003056!7.71e-11!61;UBERON:0000924!1.13e-10!173;UBERON:0006601!1.13e-10!173;UBERON:0004121!2.67e-10!169;UBERON:0001950!3.18e-10!20;UBERON:0000033!3.03e-08!123;UBERON:0000153!7.95e-08!129;UBERON:0007811!7.95e-08!129;UBERON:0002308!4.04e-07!9;UBERON:0000125!4.04e-07!9|ontology_enrichment_uberon_v019=UBERON:0006947;4.60e-13;3!UBERON:0004054;4.60e-13;3!UBERON:0000998;1.80e-10;1!UBERON:0006868;1.80e-10;1!UBERON:0001000;2.16e-10;1!UBERON:0005352;2.16e-10;1!UBERON:0005904;5.07e-10;4!UBERON:0007195;5.53e-10;1!UBERON:0001872;4.85e-08;5!UBERON:0000922;3.60e-07;49!UBERON:0001950;7.36e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.61e-13,3;UBERON:0004054,4.61e-13,3;UBERON:0000998,1.80e-10,1;UBERON:0006868,1.80e-10,1;UBERON:0001000,2.16e-10,1;UBERON:0005352,2.16e-10,1;UBERON:0005904,5.08e-10,4;UBERON:0007195,9.82e-10,1;UBERON:0001017,5.02e-09,81;UBERON:0001872,5.12e-08,5;UBERON:0001016,5.42e-08,89;UBERON:0001950,7.43e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.57978255948989,0,0,0.365921118388786,0.662648841607426,0.116193942869518,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0.211125408127993,0,0.828851746593443,0.251932747854276,0,0,0,0,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0,1.99613798001194,1.04171104434093,0.174919999992391,0,0,0,0,0.689486746482929,0.583209226766509,0,0,1.80894657938112,0,0,0,0,0,0.139423744278603,0.153900517007594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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:67251332..67251336,- | |||
|id=chr12:67251332..67251336,- | |||
|ontology_enrichment_celltype=CL:0000047!3.60e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000167;5.53e-10;1!CL:0000164;5.53e-10;1!CL:0000502;5.53e-10;1!CL:0000172;5.53e-10;1!CL:0000173;5.53e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.57e-10,8;CL:0000167,8.99e-10,1;CL:0000164,8.99e-10,1;CL:0000502,8.99e-10,1;CL:0000172,8.99e-10,1;CL:0000173,8.99e-10,1;CL:0002351,8.99e-10,1;CL:0000540,9.15e-07,6;CL:0000031,9.15e-07,6;CL:0000404,9.15e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.80e-10;1!CL:0002351;5.53e-10;1!UBERON:0003124;5.53e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.16e-10;1!DOID:10165;2.16e-10;1!DOID:1798;2.16e-10;1!DOID:4430;5.53e-10;1!DOID:170;8.50e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.98e-10,1;DOID:10165,1.98e-10,1;DOID:1798,1.98e-10,1;DOID:4430,8.99e-10,1;DOID:170,8.39e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002020!8.01e-18!34;UBERON:0003528!8.01e-18!34;UBERON:0001017!2.38e-17!82;UBERON:0001869!3.60e-16!32;UBERON:0001893!6.00e-16!34;UBERON:0005743!7.64e-16!86;UBERON:0002791!2.26e-15!33;UBERON:0001049!5.03e-15!57;UBERON:0005068!5.03e-15!57;UBERON:0006241!5.03e-15!57;UBERON:0007135!5.03e-15!57;UBERON:0000073!1.21e-14!94;UBERON:0001016!1.21e-14!94;UBERON:0002780!3.74e-14!41;UBERON:0001890!3.74e-14!41;UBERON:0006240!3.74e-14!41;UBERON:0003080!1.33e-13!42;UBERON:0002346!2.02e-12!90;UBERON:0000956!2.58e-12!25;UBERON:0000203!2.58e-12!25;UBERON:0000955!2.96e-12!69;UBERON:0006238!2.96e-12!69;UBERON:0002616!3.37e-12!59;UBERON:0002619!4.08e-12!22;UBERON:0003075!4.41e-12!86;UBERON:0007284!4.41e-12!86;UBERON:0007023!8.29e-12!115;UBERON:0003056!7.71e-11!61;UBERON:0000924!1.13e-10!173;UBERON:0006601!1.13e-10!173;UBERON:0004121!2.67e-10!169;UBERON:0001950!3.18e-10!20;UBERON:0000033!3.03e-08!123;UBERON:0000153!7.95e-08!129;UBERON:0007811!7.95e-08!129;UBERON:0002308!4.04e-07!9;UBERON:0000125!4.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.60e-13;3!UBERON:0004054;4.60e-13;3!UBERON:0000998;1.80e-10;1!UBERON:0006868;1.80e-10;1!UBERON:0001000;2.16e-10;1!UBERON:0005352;2.16e-10;1!UBERON:0005904;5.07e-10;4!UBERON:0007195;5.53e-10;1!UBERON:0001872;4.85e-08;5!UBERON:0000922;3.60e-07;49!UBERON:0001950;7.36e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.61e-13,3;UBERON:0004054,4.61e-13,3;UBERON:0000998,1.80e-10,1;UBERON:0006868,1.80e-10,1;UBERON:0001000,2.16e-10,1;UBERON:0005352,2.16e-10,1;UBERON:0005904,5.08e-10,4;UBERON:0007195,9.82e-10,1;UBERON:0001017,5.02e-09,81;UBERON:0001872,5.12e-08,5;UBERON:0001016,5.42e-08,89;UBERON:0001950,7.43e-07,20 | |||
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| |||
|short_description=p@chr12:67251332..67251336,- | |||
}} |
Revision as of 00:02, 11 September 2013
Short description: | p@chr12:67251332..67251336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:67251332..67251336, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.57e-10 | 8 |
peptide hormone secreting cell | 8.99e-10 | 1 |
enteroendocrine cell | 8.99e-10 | 1 |
type D enteroendocrine cell | 8.99e-10 | 1 |
somatostatin secreting cell | 8.99e-10 | 1 |
pancreatic D cell | 8.99e-10 | 1 |
progenitor cell of endocrine pancreas | 8.99e-10 | 1 |
neuron | 9.15e-07 | 6 |
neuroblast | 9.15e-07 | 6 |
electrically signaling cell | 9.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.61e-13 | 3 |
internal male genitalia | 4.61e-13 | 3 |
seminal vesicle | 1.80e-10 | 1 |
seminal fluid secreting gland | 1.80e-10 | 1 |
vas deferens | 2.16e-10 | 1 |
spermatic cord | 2.16e-10 | 1 |
duct of male reproductive system | 5.08e-10 | 4 |
stroma of bone marrow | 9.82e-10 | 1 |
central nervous system | 5.02e-09 | 81 |
parietal lobe | 5.12e-08 | 5 |
nervous system | 5.42e-08 | 89 |
neocortex | 7.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.98e-10 | 1 |
endocrine pancreas cancer | 1.98e-10 | 1 |
pancreatic endocrine carcinoma | 1.98e-10 | 1 |
somatostatinoma | 8.99e-10 | 1 |
endocrine gland cancer | 8.39e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.