FFCP PHASE1:Hg19::chr12:6658208..6658243,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25900|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24970|TSSclassifier=S|UniProt=Q9Y4M3,Q6P593|association_with_transcript=30bp_to_uc001qoz.1,uc001qpa.1,uc001qpg.2_5end|coexpression_cluster_id=C65|description=CAGE_peak_5_at_IFFO1_5end|id=chr12:6658208..6658243,-|ontology_enrichment_celltype=CL:0002057!4.40e-32!42;CL:0000860!1.17e-28!45;CL:0002194!1.89e-24!63;CL:0000576!1.89e-24!63;CL:0000040!1.89e-24!63;CL:0000559!1.89e-24!63;CL:0002009!4.54e-23!65;CL:0000766!4.62e-23!76;CL:0000839!1.02e-21!70;CL:0000557!4.02e-21!71;CL:0000048!4.21e-16!430;CL:0000723!3.80e-15!436;CL:0000134!1.29e-14!358;CL:0000034!6.28e-14!444;CL:0002320!6.30e-14!365;CL:0000219!4.35e-12!390;CL:0000763!1.11e-10!112;CL:0000049!1.11e-10!112;CL:0000057!1.10e-09!75;CL:0002087!1.24e-07!119|ontology_enrichment_celltype_v019=CL:0000860;3.19e-79;33!CL:0002057;3.19e-79;33!CL:0000473;1.73e-62;39!CL:0000234;1.73e-62;39!CL:0000576;7.26e-43;48!CL:0000766;2.50e-25;69!CL:0000763;7.13e-14;100!CL:0002087;3.82e-10;104!CL:0000135;6.26e-09;3!CL:0000388;6.26e-09;3!CL:0000738;2.72e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,8.93e-75,42;CL:0002057,8.93e-75,42;CL:0000473,1.70e-72,48;CL:0000234,1.70e-72,48;CL:0002194,3.09e-59,59;CL:0000576,3.09e-59,59;CL:0000040,3.09e-59,59;CL:0000559,3.09e-59,59;CL:0002009,5.34e-57,61;CL:0000766,1.63e-55,72;CL:0000839,5.45e-52,66;CL:0000557,4.46e-51,67;CL:0000763,1.17e-33,108;CL:0000049,1.17e-33,108;CL:0002087,8.01e-26,115;CL:0000738,1.22e-24,136;CL:0002031,2.37e-24,120;CL:0002032,3.01e-19,161;CL:0000837,3.01e-19,161;CL:0000037,4.98e-18,168;CL:0000134,3.28e-17,354;CL:0002320,1.31e-16,361;CL:0000988,1.31e-16,177;CL:0000048,4.30e-15,427;CL:0000723,1.10e-14,433;CL:0000219,1.69e-14,386;CL:0000034,3.68e-14,441;CL:0000135,2.97e-09,3;CL:0000388,2.97e-09,3|ontology_enrichment_development_v019=CL:0002057;4.15e-55;42!CL:0000049;2.76e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.63e-20!80;UBERON:0004765!1.03e-18!101;UBERON:0001434!1.03e-18!101;UBERON:0001474!1.83e-18!86;UBERON:0002204!2.65e-18!167;UBERON:0002390!2.95e-15!102;UBERON:0003061!2.95e-15!102;UBERON:0002193!9.47e-14!112;UBERON:0003081!9.72e-14!216;UBERON:0002384!2.31e-13!375;UBERON:0002405!1.34e-11!115;UBERON:0001637!5.91e-07!42;UBERON:0003509!5.91e-07!42;UBERON:0004572!5.91e-07!42|ontology_enrichment_uberon_v019=UBERON:0007846;6.26e-09;3!UBERON:0000043;6.26e-09;3!UBERON:0007845;6.26e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-46,76;UBERON:0001474,1.64e-42,82;UBERON:0004765,7.11e-38,90;UBERON:0002405,2.43e-36,93;UBERON:0001434,3.45e-35,100;UBERON:0002390,5.44e-34,98;UBERON:0003061,5.44e-34,98;UBERON:0002193,6.07e-30,108;UBERON:0002204,3.35e-26,167;UBERON:0003081,2.47e-18,203;UBERON:0002384,1.25e-16,371;UBERON:0000926,4.08e-12,315;UBERON:0004120,4.08e-12,315;UBERON:0006603,4.08e-12,315;UBERON:0007846,2.97e-09,3;UBERON:0000043,2.97e-09,3;UBERON:0007845,2.97e-09,3|phase1_expression=0.726713517082227,0.428201047781966,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0,0.204000691244253,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.08371286321253,0,0,0,0,0,0,1.66198622559563,2.00544447470142,0.434021741431704,0.447830948479849,0,1.03030227053675,31.406019576386,25.3176882271502,23.2880698740304,32.0752070929845,42.7614603542699,20.4406204790768,14.0969272237854,28.6899991312593,10.4052181150977,5.17118521104928,8.39130088658974,8.12558919566051,29.7422896477315,32.7487380069415,17.9778787556068,21.7319563583341,29.2045414639245,15.344091019177,21.4403345121365,31.3157942465962,19.6063385245039,12.7692064996577,20.425868088881,9.9651559839292,15.3261685806613,24.5096971657495,13.031330682307,6.65939452896706,19.1504370713534,5.06339819905415,0.633765858935825,0.425208599930087,0.209658645508376,1.01095768031846,0.750884464207532,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0.860234595106124,0,0.56530794192401,1.25849830862972,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,1.19168262731897,2.58152958673932,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.635795703478686,0,0.412210116953756,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y4M3,Q6P593 | |||
|association_with_transcript=30bp_to_uc001qoz.1,uc001qpa.1,uc001qpg.2_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_5_at_IFFO1_5end | |||
|id=chr12:6658208..6658243,- | |||
|ontology_enrichment_celltype=CL:0002057!4.40e-32!42;CL:0000860!1.17e-28!45;CL:0002194!1.89e-24!63;CL:0000576!1.89e-24!63;CL:0000040!1.89e-24!63;CL:0000559!1.89e-24!63;CL:0002009!4.54e-23!65;CL:0000766!4.62e-23!76;CL:0000839!1.02e-21!70;CL:0000557!4.02e-21!71;CL:0000048!4.21e-16!430;CL:0000723!3.80e-15!436;CL:0000134!1.29e-14!358;CL:0000034!6.28e-14!444;CL:0002320!6.30e-14!365;CL:0000219!4.35e-12!390;CL:0000763!1.11e-10!112;CL:0000049!1.11e-10!112;CL:0000057!1.10e-09!75;CL:0002087!1.24e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-79;33!CL:0002057;3.19e-79;33!CL:0000473;1.73e-62;39!CL:0000234;1.73e-62;39!CL:0000576;7.26e-43;48!CL:0000766;2.50e-25;69!CL:0000763;7.13e-14;100!CL:0002087;3.82e-10;104!CL:0000135;6.26e-09;3!CL:0000388;6.26e-09;3!CL:0000738;2.72e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.93e-75,42;CL:0002057,8.93e-75,42;CL:0000473,1.70e-72,48;CL:0000234,1.70e-72,48;CL:0002194,3.09e-59,59;CL:0000576,3.09e-59,59;CL:0000040,3.09e-59,59;CL:0000559,3.09e-59,59;CL:0002009,5.34e-57,61;CL:0000766,1.63e-55,72;CL:0000839,5.45e-52,66;CL:0000557,4.46e-51,67;CL:0000763,1.17e-33,108;CL:0000049,1.17e-33,108;CL:0002087,8.01e-26,115;CL:0000738,1.22e-24,136;CL:0002031,2.37e-24,120;CL:0002032,3.01e-19,161;CL:0000837,3.01e-19,161;CL:0000037,4.98e-18,168;CL:0000134,3.28e-17,354;CL:0002320,1.31e-16,361;CL:0000988,1.31e-16,177;CL:0000048,4.30e-15,427;CL:0000723,1.10e-14,433;CL:0000219,1.69e-14,386;CL:0000034,3.68e-14,441;CL:0000135,2.97e-09,3;CL:0000388,2.97e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-55;42!CL:0000049;2.76e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.63e-20!80;UBERON:0004765!1.03e-18!101;UBERON:0001434!1.03e-18!101;UBERON:0001474!1.83e-18!86;UBERON:0002204!2.65e-18!167;UBERON:0002390!2.95e-15!102;UBERON:0003061!2.95e-15!102;UBERON:0002193!9.47e-14!112;UBERON:0003081!9.72e-14!216;UBERON:0002384!2.31e-13!375;UBERON:0002405!1.34e-11!115;UBERON:0001637!5.91e-07!42;UBERON:0003509!5.91e-07!42;UBERON:0004572!5.91e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.26e-09;3!UBERON:0000043;6.26e-09;3!UBERON:0007845;6.26e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-46,76;UBERON:0001474,1.64e-42,82;UBERON:0004765,7.11e-38,90;UBERON:0002405,2.43e-36,93;UBERON:0001434,3.45e-35,100;UBERON:0002390,5.44e-34,98;UBERON:0003061,5.44e-34,98;UBERON:0002193,6.07e-30,108;UBERON:0002204,3.35e-26,167;UBERON:0003081,2.47e-18,203;UBERON:0002384,1.25e-16,371;UBERON:0000926,4.08e-12,315;UBERON:0004120,4.08e-12,315;UBERON:0006603,4.08e-12,315;UBERON:0007846,2.97e-09,3;UBERON:0000043,2.97e-09,3;UBERON:0007845,2.97e-09,3 | |||
|phase1_expression=0.726713517082227,0.428201047781966,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0,0.204000691244253,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.08371286321253,0,0,0,0,0,0,1.66198622559563,2.00544447470142,0.434021741431704,0.447830948479849,0,1.03030227053675,31.406019576386,25.3176882271502,23.2880698740304,32.0752070929845,42.7614603542699,20.4406204790768,14.0969272237854,28.6899991312593,10.4052181150977,5.17118521104928,8.39130088658974,8.12558919566051,29.7422896477315,32.7487380069415,17.9778787556068,21.7319563583341,29.2045414639245,15.344091019177,21.4403345121365,31.3157942465962,19.6063385245039,12.7692064996577,20.425868088881,9.9651559839292,15.3261685806613,24.5096971657495,13.031330682307,6.65939452896706,19.1504370713534,5.06339819905415,0.633765858935825,0.425208599930087,0.209658645508376,1.01095768031846,0.750884464207532,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0.860234595106124,0,0.56530794192401,1.25849830862972,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,1.19168262731897,2.58152958673932,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.635795703478686,0,0.412210116953756,0.515281080091258,0.744467425326359,0.506328996723799,0.779496041289589,0.504867548488229,0.0920498986422993,0.323292113637624,1.06502877754984,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,1.23108503043699,0.702012795417713,3.56714789492948,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.744323423456331,1.84154367945675,0.841980283299221,1.02511319404561,0,0.64341568457443,0,0.308419387605311,0.355123450626254,0.410635780069046,1.03850885836724,0.813472649219715,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0.308097234229289,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,2.60979897622522,0.55597265731176,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,0.974853958525138,0,0.136499911407986,0,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,0,1.89996871767898,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0.372757606696298,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,1.44119953416961,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0,1.37280437475228,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.751145584238999,0,0.110929051536852,0.310482014706917,0,0,0,0.570930667089935,0.235265819698172,0,0,0.597019211547496,0.233713309847224,0,0.568209015825267,0.754703705257725,1.77962244319307,0.686520205190771,0.907385542579434,0,0.443565449968902,0.63718706865481,1.34940933649081,0.155262956876259,1.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| |||
|short_description=p5@IFFO1 | |||
}} |
Revision as of 00:01, 11 September 2013
Short description: | p5@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IFFO1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 30bp_to_uc001qoz.1, uc001qpa.1, uc001qpg.2_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | Q9Y4M3Q6P593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.93e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.93e-75 | 42 |
defensive cell | 1.70e-72 | 48 |
phagocyte | 1.70e-72 | 48 |
monopoietic cell | 3.09e-59 | 59 |
monocyte | 3.09e-59 | 59 |
monoblast | 3.09e-59 | 59 |
promonocyte | 3.09e-59 | 59 |
macrophage dendritic cell progenitor | 5.34e-57 | 61 |
myeloid leukocyte | 1.63e-55 | 72 |
myeloid lineage restricted progenitor cell | 5.45e-52 | 66 |
granulocyte monocyte progenitor cell | 4.46e-51 | 67 |
myeloid cell | 1.17e-33 | 108 |
common myeloid progenitor | 1.17e-33 | 108 |
nongranular leukocyte | 8.01e-26 | 115 |
leukocyte | 1.22e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 2.37e-24 | 120 |
hematopoietic oligopotent progenitor cell | 3.01e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.01e-19 | 161 |
hematopoietic stem cell | 4.98e-18 | 168 |
mesenchymal cell | 3.28e-17 | 354 |
connective tissue cell | 1.31e-16 | 361 |
hematopoietic cell | 1.31e-16 | 177 |
multi fate stem cell | 4.30e-15 | 427 |
somatic stem cell | 1.10e-14 | 433 |
motile cell | 1.69e-14 | 386 |
stem cell | 3.68e-14 | 441 |
fibrocyte | 2.97e-09 | 3 |
tendon cell | 2.97e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-46 | 76 |
bone element | 1.64e-42 | 82 |
skeletal element | 7.11e-38 | 90 |
immune system | 2.43e-36 | 93 |
skeletal system | 3.45e-35 | 100 |
hematopoietic system | 5.44e-34 | 98 |
blood island | 5.44e-34 | 98 |
hemolymphoid system | 6.07e-30 | 108 |
musculoskeletal system | 3.35e-26 | 167 |
lateral plate mesoderm | 2.47e-18 | 203 |
connective tissue | 1.25e-16 | 371 |
mesoderm | 4.08e-12 | 315 |
mesoderm-derived structure | 4.08e-12 | 315 |
presumptive mesoderm | 4.08e-12 | 315 |
dense regular connective tissue | 2.97e-09 | 3 |
tendon | 2.97e-09 | 3 |
regular connective tissue | 2.97e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.