FFCP PHASE1:Hg19::chr12:58241001..58241005,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1356|description=CAGE_peak_at_chr12:58241001..58241005,+|id=chr12:58241001..58241005,+|ontology_enrichment_celltype=CL:0000860!7.29e-17!45;CL:0002057!8.93e-15!42;CL:0002194!1.12e-10!63;CL:0000576!1.12e-10!63;CL:0000040!1.12e-10!63;CL:0000559!1.12e-10!63;CL:0002009!7.00e-10!65;CL:0000839!7.26e-10!70;CL:0000557!1.66e-09!71;CL:0000766!1.70e-08!76|ontology_enrichment_celltype_v019=CL:0000860;2.39e-75;33!CL:0002057;2.39e-75;33!CL:0000473;1.73e-51;39!CL:0000234;1.73e-51;39!CL:0000576;3.80e-34;48!CL:0000766;1.49e-17;69!CL:0000763;1.24e-09;100!CL:0002087;4.47e-08;104|ontology_enrichment_celltype_v019_2=CL:0000860,3.17e-63,42;CL:0002057,3.17e-63,42;CL:0000473,2.95e-54,48;CL:0000234,2.95e-54,48;CL:0002194,1.04e-41,59;CL:0000576,1.04e-41,59;CL:0000040,1.04e-41,59;CL:0000559,1.04e-41,59;CL:0002009,4.29e-40,61;CL:0000839,1.79e-36,66;CL:0000557,8.16e-36,67;CL:0000766,8.66e-33,72;CL:0000763,2.72e-22,108;CL:0000049,2.72e-22,108;CL:0002087,1.31e-17,115;CL:0002031,1.48e-16,120;CL:0000738,4.70e-16,136;CL:0000988,3.10e-13,177;CL:0000037,2.02e-12,168;CL:0002032,2.82e-12,161;CL:0000837,2.82e-12,161;CL:0002320,4.10e-08,361;CL:0000134,7.00e-08,354;CL:0000219,2.33e-07,386|ontology_enrichment_development_v019=CL:0002057;2.87e-47;42!CL:0000049;1.44e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.87e-07!80;UBERON:0001474!4.79e-07!86|ontology_enrichment_uberon_v019=UBERON:0005406;6.38e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-30,76;UBERON:0001474,7.74e-28,82;UBERON:0002390,1.34e-25,98;UBERON:0003061,1.34e-25,98;UBERON:0002405,1.34e-25,93;UBERON:0004765,1.15e-24,90;UBERON:0002193,1.86e-22,108;UBERON:0001434,2.03e-21,100;UBERON:0003081,3.12e-12,203;UBERON:0002204,8.64e-10,167;UBERON:0002384,1.31e-07,371;UBERON:0005406,4.70e-07,2|phase1_expression=0.363356758541113,0,0.704772020479856,0,0.446961094427288,2.61701557230111,5.06599756336621,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.286235987131057,0.273748850145768,0.125542639594803,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0.217010870715852,0,0,0,3.19876125315042,3.77875943688809,5.09426528494414,3.95129362739664,4.93401465626191,8.981484755958,3.45230870786581,3.58624989140741,3.31075121844019,4.13694816883942,8.39130088658974,9.47985406160392,3.01187743268168,5.18521685109907,6.29225756446237,2.44867113896722,4.17207735198922,7.67204550958849,1.31940520074686,2.99195486432448,2.13112375266347,2.03146467040009,9.64554881974938,13.0792672289071,6.28121663141858,3.65038042894141,3.9093992046921,6.05399502633369,8.47038562771399,8.54448446090388,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,1.00267582127178,0,0.795285947051099,1.45990461090791,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0.174129737299267,0.664789802594326,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.516628905878827,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.427114777637135,0.211931901159562,0.900273288253207,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0,1.00973509697646,0.276149695926898,0.969876340912871,0,0.403008392910561,0.169560592310488,0,0,0,0.609868530647977,0.265059536642971,0.464775771478074,0.518305275076852,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,2.37061319387782,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0.234282829985426,0.601892199455438,0,2.0694614258501,0,0.184369168541703,0,0.391602314925481,1.37257369524342,0,0,0,3.03127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0.232420756919918,0.241718899183244,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1356 | |||
|description=CAGE_peak_at_chr12:58241001..58241005,+ | |||
|id=chr12:58241001..58241005,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.29e-17!45;CL:0002057!8.93e-15!42;CL:0002194!1.12e-10!63;CL:0000576!1.12e-10!63;CL:0000040!1.12e-10!63;CL:0000559!1.12e-10!63;CL:0002009!7.00e-10!65;CL:0000839!7.26e-10!70;CL:0000557!1.66e-09!71;CL:0000766!1.70e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.39e-75;33!CL:0002057;2.39e-75;33!CL:0000473;1.73e-51;39!CL:0000234;1.73e-51;39!CL:0000576;3.80e-34;48!CL:0000766;1.49e-17;69!CL:0000763;1.24e-09;100!CL:0002087;4.47e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.17e-63,42;CL:0002057,3.17e-63,42;CL:0000473,2.95e-54,48;CL:0000234,2.95e-54,48;CL:0002194,1.04e-41,59;CL:0000576,1.04e-41,59;CL:0000040,1.04e-41,59;CL:0000559,1.04e-41,59;CL:0002009,4.29e-40,61;CL:0000839,1.79e-36,66;CL:0000557,8.16e-36,67;CL:0000766,8.66e-33,72;CL:0000763,2.72e-22,108;CL:0000049,2.72e-22,108;CL:0002087,1.31e-17,115;CL:0002031,1.48e-16,120;CL:0000738,4.70e-16,136;CL:0000988,3.10e-13,177;CL:0000037,2.02e-12,168;CL:0002032,2.82e-12,161;CL:0000837,2.82e-12,161;CL:0002320,4.10e-08,361;CL:0000134,7.00e-08,354;CL:0000219,2.33e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-47;42!CL:0000049;1.44e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.87e-07!80;UBERON:0001474!4.79e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;6.38e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-30,76;UBERON:0001474,7.74e-28,82;UBERON:0002390,1.34e-25,98;UBERON:0003061,1.34e-25,98;UBERON:0002405,1.34e-25,93;UBERON:0004765,1.15e-24,90;UBERON:0002193,1.86e-22,108;UBERON:0001434,2.03e-21,100;UBERON:0003081,3.12e-12,203;UBERON:0002204,8.64e-10,167;UBERON:0002384,1.31e-07,371;UBERON:0005406,4.70e-07,2 | |||
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| |||
|short_description=p@chr12:58241001..58241005,+ | |||
}} |
Revision as of 23:46, 10 September 2013
Short description: | p@chr12:58241001..58241005, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:58241001..58241005, + |
Coexpression cluster: | C1356_CD14_thymus_Hodgkin_NK_anaplastic_hepatoblastoma_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.17e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.17e-63 | 42 |
defensive cell | 2.95e-54 | 48 |
phagocyte | 2.95e-54 | 48 |
monopoietic cell | 1.04e-41 | 59 |
monocyte | 1.04e-41 | 59 |
monoblast | 1.04e-41 | 59 |
promonocyte | 1.04e-41 | 59 |
macrophage dendritic cell progenitor | 4.29e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.79e-36 | 66 |
granulocyte monocyte progenitor cell | 8.16e-36 | 67 |
myeloid leukocyte | 8.66e-33 | 72 |
myeloid cell | 2.72e-22 | 108 |
common myeloid progenitor | 2.72e-22 | 108 |
nongranular leukocyte | 1.31e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.48e-16 | 120 |
leukocyte | 4.70e-16 | 136 |
hematopoietic cell | 3.10e-13 | 177 |
hematopoietic stem cell | 2.02e-12 | 168 |
hematopoietic oligopotent progenitor cell | 2.82e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-12 | 161 |
connective tissue cell | 4.10e-08 | 361 |
mesenchymal cell | 7.00e-08 | 354 |
motile cell | 2.33e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-30 | 76 |
bone element | 7.74e-28 | 82 |
hematopoietic system | 1.34e-25 | 98 |
blood island | 1.34e-25 | 98 |
immune system | 1.34e-25 | 93 |
skeletal element | 1.15e-24 | 90 |
hemolymphoid system | 1.86e-22 | 108 |
skeletal system | 2.03e-21 | 100 |
lateral plate mesoderm | 3.12e-12 | 203 |
musculoskeletal system | 8.64e-10 | 167 |
connective tissue | 1.31e-07 | 371 |
perirenal fat | 4.70e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.