FFCP PHASE1:Hg19::chr12:58003916..58003927,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115557|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30275|TSSclassifier=S|UniProt=Q96M35,F8W7Z4,A9CQZ6,Q86VW2|association_with_transcript=-35bp_to_ENST00000300189,ENST00000333972,NM_001111270,uc009zpy.2_5end|coexpression_cluster_id=C2225|description=CAGE_peak_8_at_ARHGEF25_5end|id=chr12:58003916..58003927,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005754;3.57e-11;1!UBERON:0004874;3.57e-11;1!UBERON:0006298;9.96e-11;1!UBERON:0006242;9.96e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.45e-36!115;UBERON:0003135!2.30e-08!11;UBERON:0006947!1.45e-07!3;UBERON:0004054!1.45e-07!3;UBERON:0000468!2.12e-07!659;UBERON:0001049!6.05e-07!57;UBERON:0005068!6.05e-07!57;UBERON:0006241!6.05e-07!57;UBERON:0007135!6.05e-07!57|ontology_enrichment_uberon_v019=UBERON:0006947;9.28e-14;3!UBERON:0004054;9.28e-14;3!UBERON:0004175;2.33e-11;21!UBERON:0005795;3.57e-11;1!UBERON:0006834;3.57e-11;1!UBERON:0000989;3.57e-11;1!UBERON:0000998;3.57e-11;1!UBERON:0008811;3.57e-11;1!UBERON:0006868;3.57e-11;1!UBERON:0001000;9.96e-11;1!UBERON:0001736;9.96e-11;1!UBERON:0000996;9.96e-11;1!UBERON:0002146;9.96e-11;1!UBERON:0005623;9.96e-11;1!UBERON:0005352;9.96e-11;1!UBERON:0005904;1.50e-10;4!UBERON:0003135;1.81e-08;11!UBERON:0003101;2.98e-07;22!UBERON:0000079;2.98e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.97e-16,114;UBERON:0006947,5.37e-14,3;UBERON:0004054,5.37e-14,3;UBERON:0000989,2.53e-11,1;UBERON:0008811,2.53e-11,1;UBERON:0006258,2.53e-11,1;UBERON:0005876,2.53e-11,1;UBERON:0004874,2.53e-11,1;UBERON:0000998,2.79e-11,1;UBERON:0006868,2.79e-11,1;UBERON:0006834,3.08e-11,1;UBERON:0001000,5.57e-11,1;UBERON:0005352,5.57e-11,1;UBERON:0002146,6.14e-11,1;UBERON:0005623,6.14e-11,1;UBERON:0001736,9.05e-11,1;UBERON:0006298,9.05e-11,1;UBERON:0000996,9.97e-11,1;UBERON:0005904,9.99e-11,4;UBERON:0004175,1.43e-09,25;UBERON:0003135,1.33e-08,11;UBERON:0003064,1.77e-08,28;UBERON:0005156,2.38e-07,59;UBERON:0000990,2.38e-07,59;UBERON:0003101,2.51e-07,22;UBERON:0000079,2.51e-07,22;UBERON:0003133,7.46e-07,48|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,2.00070672109872,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,1.22206028986725,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,1.83328339209347,0,0.199679000498991,0,0.669514372325618,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.182248669974074,0,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.41483874589699,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115557 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30275 | |||
|TSSclassifier=S | |||
|UniProt=Q96M35,F8W7Z4,A9CQZ6,Q86VW2 | |||
|association_with_transcript=-35bp_to_ENST00000300189,ENST00000333972,NM_001111270,uc009zpy.2_5end | |||
|coexpression_cluster_id=C2225 | |||
|description=CAGE_peak_8_at_ARHGEF25_5end | |||
|id=chr12:58003916..58003927,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.57e-11;1!UBERON:0004874;3.57e-11;1!UBERON:0006298;9.96e-11;1!UBERON:0006242;9.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-36!115;UBERON:0003135!2.30e-08!11;UBERON:0006947!1.45e-07!3;UBERON:0004054!1.45e-07!3;UBERON:0000468!2.12e-07!659;UBERON:0001049!6.05e-07!57;UBERON:0005068!6.05e-07!57;UBERON:0006241!6.05e-07!57;UBERON:0007135!6.05e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.28e-14;3!UBERON:0004054;9.28e-14;3!UBERON:0004175;2.33e-11;21!UBERON:0005795;3.57e-11;1!UBERON:0006834;3.57e-11;1!UBERON:0000989;3.57e-11;1!UBERON:0000998;3.57e-11;1!UBERON:0008811;3.57e-11;1!UBERON:0006868;3.57e-11;1!UBERON:0001000;9.96e-11;1!UBERON:0001736;9.96e-11;1!UBERON:0000996;9.96e-11;1!UBERON:0002146;9.96e-11;1!UBERON:0005623;9.96e-11;1!UBERON:0005352;9.96e-11;1!UBERON:0005904;1.50e-10;4!UBERON:0003135;1.81e-08;11!UBERON:0003101;2.98e-07;22!UBERON:0000079;2.98e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.97e-16,114;UBERON:0006947,5.37e-14,3;UBERON:0004054,5.37e-14,3;UBERON:0000989,2.53e-11,1;UBERON:0008811,2.53e-11,1;UBERON:0006258,2.53e-11,1;UBERON:0005876,2.53e-11,1;UBERON:0004874,2.53e-11,1;UBERON:0000998,2.79e-11,1;UBERON:0006868,2.79e-11,1;UBERON:0006834,3.08e-11,1;UBERON:0001000,5.57e-11,1;UBERON:0005352,5.57e-11,1;UBERON:0002146,6.14e-11,1;UBERON:0005623,6.14e-11,1;UBERON:0001736,9.05e-11,1;UBERON:0006298,9.05e-11,1;UBERON:0000996,9.97e-11,1;UBERON:0005904,9.99e-11,4;UBERON:0004175,1.43e-09,25;UBERON:0003135,1.33e-08,11;UBERON:0003064,1.77e-08,28;UBERON:0005156,2.38e-07,59;UBERON:0000990,2.38e-07,59;UBERON:0003101,2.51e-07,22;UBERON:0000079,2.51e-07,22;UBERON:0003133,7.46e-07,48 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,2.00070672109872,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,1.22206028986725,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,1.83328339209347,0,0.199679000498991,0,0.669514372325618,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.182248669974074,0,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.41483874589699,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,2.97726707033577,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0,0.197318320688547,0,0,2.27629969266491,0,0,0.913158720509496,0,0,0.643288897589907,0,0.581207126840626,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0,0,2.69663153929296,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.281951753939561,0.515663103788617,0,0,0,0,0,1.37618785021362,0,0,0.203974470572744,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,0.378893491091197,0.267964130156178,0,0.103432995861895,0.426467963801962,0.476128862927481,0,0,0,0.190941474834495,0.606351566874658,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,2.81155321620593,2.03448089157869,1.33151354837103,0.402547587182052,0 | |||
|short_description=p8@ARHGEF25 | |||
}} |
Revision as of 23:43, 10 September 2013
Short description: | p8@ARHGEF25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ARHGEF25_5end |
Coexpression cluster: | C2225_uterus_smooth_ductus_cervix_prostate_heart_umbilical |
Association with transcript: | -35bp_to_ENST00000300189, ENST00000333972, NM_001111270, uc009zpy.2_5end |
EntrezGene: | ARHGEF25 |
HGNC: | 30275 |
UniProt: | Q96M35F8W7Z4A9CQZ6Q86VW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.97e-16 | 114 |
male genital duct | 5.37e-14 | 3 |
internal male genitalia | 5.37e-14 | 3 |
penis | 2.53e-11 | 1 |
intromittent organ | 2.53e-11 | 1 |
lateral plate mesenchyme | 2.53e-11 | 1 |
undifferentiated genital tubercle | 2.53e-11 | 1 |
somatopleure | 2.53e-11 | 1 |
seminal vesicle | 2.79e-11 | 1 |
seminal fluid secreting gland | 2.79e-11 | 1 |
uterus or analog | 3.08e-11 | 1 |
vas deferens | 5.57e-11 | 1 |
spermatic cord | 5.57e-11 | 1 |
pulmonary valve | 6.14e-11 | 1 |
semi-lunar valve | 6.14e-11 | 1 |
submandibular gland | 9.05e-11 | 1 |
submandibular gland primordium | 9.05e-11 | 1 |
vagina | 9.97e-11 | 1 |
duct of male reproductive system | 9.99e-11 | 4 |
internal genitalia | 1.43e-09 | 25 |
male reproductive organ | 1.33e-08 | 11 |
intermediate mesoderm | 1.77e-08 | 28 |
reproductive structure | 2.38e-07 | 59 |
reproductive system | 2.38e-07 | 59 |
male organism | 2.51e-07 | 22 |
male reproductive system | 2.51e-07 | 22 |
reproductive organ | 7.46e-07 | 48 |
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