FFCP PHASE1:Hg19::chr12:57914742..57914754,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114785|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20445|TSSclassifier=S|UniProt=F8VNX1|association_with_transcript=0bp_to_ENST00000551351_5end|coexpression_cluster_id=C1366|description=CAGE_peak_14_at_MBD6_5end|id=chr12:57914742..57914754,+|ontology_enrichment_celltype=CL:0000037!4.00e-36!172;CL:0000566!4.00e-36!172;CL:0000988!4.87e-35!182;CL:0000738!9.18e-35!140;CL:0002057!1.49e-34!42;CL:0002032!1.10e-32!165;CL:0000837!1.10e-32!165;CL:0000860!6.35e-31!45;CL:0002087!5.96e-28!119;CL:0002031!8.32e-28!124;CL:0000766!1.42e-24!76;CL:0000763!2.72e-24!112;CL:0000049!2.72e-24!112;CL:0000557!1.27e-21!71;CL:0002009!2.17e-20!65;CL:0000839!5.98e-20!70;CL:0002194!2.72e-19!63;CL:0000576!2.72e-19!63;CL:0000040!2.72e-19!63;CL:0000559!2.72e-19!63;CL:0000219!4.15e-14!390;CL:0000134!1.88e-13!358;CL:0002320!2.21e-12!365;CL:0000034!3.01e-11!444;CL:0000048!3.33e-10!430;CL:0000723!1.79e-09!436;CL:0002393!3.81e-08!9;CL:0002397!3.81e-08!9;CL:0000542!6.14e-08!53;CL:0000051!6.14e-08!53;CL:0000838!1.17e-07!52|ontology_enrichment_celltype_v019=CL:0000860;5.87e-45;33!CL:0002057;5.87e-45;33!CL:0000473;2.03e-33;39!CL:0000234;2.03e-33;39!CL:0000576;2.36e-28;48!CL:0000766;2.70e-24;69!CL:0000094;4.13e-14;8!CL:0000763;1.71e-12;100!CL:0002087;2.21e-12;104!CL:0000623;4.81e-11;3!CL:0000738;1.52e-10;136!CL:0000767;3.46e-10;3!CL:0000081;4.66e-10;11!CL:0002393;1.56e-08;6!CL:0002397;1.56e-08;6!CL:0000771;5.35e-08;2|ontology_enrichment_celltype_v019_2=CL:0000766,4.67e-56,72;CL:0000860,2.43e-55,42;CL:0002057,2.43e-55,42;CL:0000473,7.12e-51,48;CL:0000234,7.12e-51,48;CL:0000738,5.07e-48,136;CL:0000557,1.91e-44,67;CL:0000839,2.15e-42,66;CL:0000037,3.10e-42,168;CL:0000763,1.49e-40,108;CL:0000049,1.49e-40,108;CL:0002032,1.64e-40,161;CL:0000837,1.64e-40,161;CL:0002009,2.62e-40,61;CL:0000988,1.86e-39,177;CL:0002031,3.53e-39,120;CL:0002194,4.71e-39,59;CL:0000576,4.71e-39,59;CL:0000040,4.71e-39,59;CL:0000559,4.71e-39,59;CL:0002087,5.36e-35,115;CL:0000134,5.88e-16,354;CL:0002320,2.14e-15,361;CL:0000094,2.60e-14,8;CL:0000219,2.01e-13,386;CL:0000034,1.75e-12,441;CL:0000048,1.01e-11,427;CL:0000723,2.23e-11,433;CL:0000623,4.62e-11,3;CL:0000825,4.62e-11,3;CL:0000767,2.32e-10,3;CL:0000081,3.36e-10,11;CL:0002393,1.55e-08,9;CL:0002397,1.55e-08,9;CL:0000771,5.12e-08,2|ontology_enrichment_development_v019=CL:0002057;5.02e-39;42!CL:0000049;5.27e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.27e-25!102;UBERON:0003061!4.27e-25!102;UBERON:0002193!2.06e-22!112;UBERON:0002371!3.88e-19!80;UBERON:0001474!6.42e-18!86;UBERON:0002405!2.51e-14!115;UBERON:0004765!4.13e-14!101;UBERON:0001434!4.13e-14!101;UBERON:0002384!2.89e-11!375;UBERON:0003081!8.47e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.73e-41,76;UBERON:0001474,2.90e-37,82;UBERON:0004765,3.63e-33,90;UBERON:0002390,7.53e-32,98;UBERON:0003061,7.53e-32,98;UBERON:0002405,8.24e-32,93;UBERON:0001434,5.80e-29,100;UBERON:0002193,4.68e-28,108;UBERON:0002204,7.44e-15,167;UBERON:0002384,1.24e-14,371;UBERON:0003081,2.72e-14,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.61130724598361,0.492603536699674,0.393553906568396,2.75354993794233,2.30297638858328,1.70297735647684,0,0.6024118375565,0,0.154934401160603,0.142169232487422,3.22960483268332,1.66198622559563,1.40381113229099,0.651032612147555,0,0,0,0.436194716338694,0.755751887377619,2.18325655069035,1.62700325833979,0.822335776043652,5.88442104700697,4.31538588483226,1.7931249457037,3.07426898855161,3.10271112662957,1.93645405075148,8.12558919566051,1.88242339542605,1.09162460023138,1.79778787556068,1.53041946185451,1.92557416245656,6.39337125799041,0.989553900560148,1.19678194572979,2.13112375266347,0.870627715885752,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,5.42972111762792,0.605399502633369,1.47311054395026,1.58231193720442,0.845021145247767,2.33864729961548,2.51590374610051,1.12328631146495,0.300353785683013,0.32145117339416,1.71007646244749,0.19891667719909,0.91332076882317,0,1.09227722252426,0,6.82768356106412,0.400395987036012,0,0.661044872784862,0.954053754535364,1.70763890732835,0,1.14681968437569,3.96513985737078,1.68152568894461,0,0.590129310341499,1.17903228824749,1.23360899399706,0,0,2.36723902867367,0,0,0.883817722424512,0.443067789167242,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.534880391567015,1.01377082717959,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,10.5424333948851,3.87780264148325,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0.234321431833797,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20445 | |||
|TSSclassifier=S | |||
|UniProt=F8VNX1 | |||
|association_with_transcript=0bp_to_ENST00000551351_5end | |||
|coexpression_cluster_id=C1366 | |||
|description=CAGE_peak_14_at_MBD6_5end | |||
|id=chr12:57914742..57914754,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.00e-36!172;CL:0000566!4.00e-36!172;CL:0000988!4.87e-35!182;CL:0000738!9.18e-35!140;CL:0002057!1.49e-34!42;CL:0002032!1.10e-32!165;CL:0000837!1.10e-32!165;CL:0000860!6.35e-31!45;CL:0002087!5.96e-28!119;CL:0002031!8.32e-28!124;CL:0000766!1.42e-24!76;CL:0000763!2.72e-24!112;CL:0000049!2.72e-24!112;CL:0000557!1.27e-21!71;CL:0002009!2.17e-20!65;CL:0000839!5.98e-20!70;CL:0002194!2.72e-19!63;CL:0000576!2.72e-19!63;CL:0000040!2.72e-19!63;CL:0000559!2.72e-19!63;CL:0000219!4.15e-14!390;CL:0000134!1.88e-13!358;CL:0002320!2.21e-12!365;CL:0000034!3.01e-11!444;CL:0000048!3.33e-10!430;CL:0000723!1.79e-09!436;CL:0002393!3.81e-08!9;CL:0002397!3.81e-08!9;CL:0000542!6.14e-08!53;CL:0000051!6.14e-08!53;CL:0000838!1.17e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.87e-45;33!CL:0002057;5.87e-45;33!CL:0000473;2.03e-33;39!CL:0000234;2.03e-33;39!CL:0000576;2.36e-28;48!CL:0000766;2.70e-24;69!CL:0000094;4.13e-14;8!CL:0000763;1.71e-12;100!CL:0002087;2.21e-12;104!CL:0000623;4.81e-11;3!CL:0000738;1.52e-10;136!CL:0000767;3.46e-10;3!CL:0000081;4.66e-10;11!CL:0002393;1.56e-08;6!CL:0002397;1.56e-08;6!CL:0000771;5.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.67e-56,72;CL:0000860,2.43e-55,42;CL:0002057,2.43e-55,42;CL:0000473,7.12e-51,48;CL:0000234,7.12e-51,48;CL:0000738,5.07e-48,136;CL:0000557,1.91e-44,67;CL:0000839,2.15e-42,66;CL:0000037,3.10e-42,168;CL:0000763,1.49e-40,108;CL:0000049,1.49e-40,108;CL:0002032,1.64e-40,161;CL:0000837,1.64e-40,161;CL:0002009,2.62e-40,61;CL:0000988,1.86e-39,177;CL:0002031,3.53e-39,120;CL:0002194,4.71e-39,59;CL:0000576,4.71e-39,59;CL:0000040,4.71e-39,59;CL:0000559,4.71e-39,59;CL:0002087,5.36e-35,115;CL:0000134,5.88e-16,354;CL:0002320,2.14e-15,361;CL:0000094,2.60e-14,8;CL:0000219,2.01e-13,386;CL:0000034,1.75e-12,441;CL:0000048,1.01e-11,427;CL:0000723,2.23e-11,433;CL:0000623,4.62e-11,3;CL:0000825,4.62e-11,3;CL:0000767,2.32e-10,3;CL:0000081,3.36e-10,11;CL:0002393,1.55e-08,9;CL:0002397,1.55e-08,9;CL:0000771,5.12e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.02e-39;42!CL:0000049;5.27e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.27e-25!102;UBERON:0003061!4.27e-25!102;UBERON:0002193!2.06e-22!112;UBERON:0002371!3.88e-19!80;UBERON:0001474!6.42e-18!86;UBERON:0002405!2.51e-14!115;UBERON:0004765!4.13e-14!101;UBERON:0001434!4.13e-14!101;UBERON:0002384!2.89e-11!375;UBERON:0003081!8.47e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.73e-41,76;UBERON:0001474,2.90e-37,82;UBERON:0004765,3.63e-33,90;UBERON:0002390,7.53e-32,98;UBERON:0003061,7.53e-32,98;UBERON:0002405,8.24e-32,93;UBERON:0001434,5.80e-29,100;UBERON:0002193,4.68e-28,108;UBERON:0002204,7.44e-15,167;UBERON:0002384,1.24e-14,371;UBERON:0003081,2.72e-14,203 | |||
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| |||
|short_description=p14@MBD6 | |||
}} |
Revision as of 23:41, 10 September 2013
Short description: | p14@MBD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_MBD6_5end |
Coexpression cluster: | C1366_Eosinophils_CD14_immature_Natural_CD34_CD8_Mast |
Association with transcript: | 0bp_to_ENST00000551351_5end |
EntrezGene: | MBD6 |
HGNC: | 20445 |
UniProt: | F8VNX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.73e-41 | 76 |
bone element | 2.90e-37 | 82 |
skeletal element | 3.63e-33 | 90 |
hematopoietic system | 7.53e-32 | 98 |
blood island | 7.53e-32 | 98 |
immune system | 8.24e-32 | 93 |
skeletal system | 5.80e-29 | 100 |
hemolymphoid system | 4.68e-28 | 108 |
musculoskeletal system | 7.44e-15 | 167 |
connective tissue | 1.24e-14 | 371 |
lateral plate mesoderm | 2.72e-14 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.