FFCP PHASE1:Hg19::chr12:57481728..57481734,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29001|TSSclassifier=S|UniProt=|association_with_transcript=111bp_to_ENST00000553654_5end|coexpression_cluster_id=C6|description=CAGE_peak_5_at_TMEM194A_5end|id=chr12:57481728..57481734,-|ontology_enrichment_celltype=CL:0002057!9.80e-50!42;CL:0000860!7.59e-46!45;CL:0000738!1.98e-37!140;CL:0000766!2.06e-33!76;CL:0000839!2.71e-32!70;CL:0002087!2.88e-32!119;CL:0000557!1.02e-31!71;CL:0000037!6.13e-31!172;CL:0000566!6.13e-31!172;CL:0002031!2.81e-30!124;CL:0000988!5.83e-30!182;CL:0002194!1.02e-29!63;CL:0000576!1.02e-29!63;CL:0000040!1.02e-29!63;CL:0000559!1.02e-29!63;CL:0002009!1.46e-28!65;CL:0002032!4.12e-25!165;CL:0000837!4.12e-25!165;CL:0000763!1.33e-22!112;CL:0000049!1.33e-22!112;CL:0002320!2.10e-14!365;CL:0000134!3.76e-14!358;CL:0000034!7.62e-12!444;CL:0000219!1.13e-11!390;CL:0000723!1.44e-11!436;CL:0000048!2.78e-11!430;CL:0000842!2.99e-09!3;CL:0002393!6.84e-08!9;CL:0002397!6.84e-08!9;CL:0000224!5.10e-07!4|ontology_enrichment_celltype_v019=CL:0002393;5.37e-34;6!CL:0002397;5.37e-34;6!CL:0000771;2.74e-12;2!CL:0000576;1.07e-09;48!CL:0000766;1.86e-07;69!CL:0000860;7.05e-07;33!CL:0002057;7.05e-07;33|ontology_enrichment_celltype_v019_2=CL:0002393,5.99e-23,9;CL:0002397,5.99e-23,9;CL:0000860,6.02e-19,42;CL:0002057,6.02e-19,42;CL:0000473,1.37e-16,48;CL:0000234,1.37e-16,48;CL:0000766,1.04e-14,72;CL:0002194,2.78e-13,59;CL:0000576,2.78e-13,59;CL:0000040,2.78e-13,59;CL:0000559,2.78e-13,59;CL:0002009,7.43e-13,61;CL:0000771,2.59e-12,2;CL:0000839,6.76e-12,66;CL:0000557,1.01e-11,67;CL:0000738,4.34e-10,136;CL:0000763,8.31e-10,108;CL:0000049,8.31e-10,108;CL:0002087,3.47e-09,115;CL:0002031,8.49e-09,120;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161;CL:0000037,4.03e-08,168;CL:0000988,1.08e-07,177|ontology_enrichment_development_v019=CL:0002057;1.14e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.52e-27!80;UBERON:0001474!2.24e-26!86;UBERON:0002390!2.82e-24!102;UBERON:0003061!2.82e-24!102;UBERON:0002193!2.84e-21!112;UBERON:0004765!3.79e-21!101;UBERON:0001434!3.79e-21!101;UBERON:0002405!8.75e-19!115;UBERON:0002384!1.25e-13!375;UBERON:0002204!4.41e-11!167;UBERON:0003081!1.85e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-10,76;UBERON:0001474,1.34e-09,82;UBERON:0004765,9.48e-09,90;UBERON:0002405,1.81e-08,93;UBERON:0002390,4.90e-08,98;UBERON:0003061,4.90e-08,98;UBERON:0001434,7.10e-08,100;UBERON:0002193,2.73e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,7.20194031091441,2.4065333696417,2.60413044859022,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.564727018627814,0,0,1.53041946185451,0.641858054152187,1.27867425159808,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,1.21079900526674,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0.44931452458598,0.300353785683013,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0.393419540227666,0,1.02800749499755,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.060749556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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29001 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=111bp_to_ENST00000553654_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_5_at_TMEM194A_5end | |||
|id=chr12:57481728..57481734,- | |||
|ontology_enrichment_celltype=CL:0002057!9.80e-50!42;CL:0000860!7.59e-46!45;CL:0000738!1.98e-37!140;CL:0000766!2.06e-33!76;CL:0000839!2.71e-32!70;CL:0002087!2.88e-32!119;CL:0000557!1.02e-31!71;CL:0000037!6.13e-31!172;CL:0000566!6.13e-31!172;CL:0002031!2.81e-30!124;CL:0000988!5.83e-30!182;CL:0002194!1.02e-29!63;CL:0000576!1.02e-29!63;CL:0000040!1.02e-29!63;CL:0000559!1.02e-29!63;CL:0002009!1.46e-28!65;CL:0002032!4.12e-25!165;CL:0000837!4.12e-25!165;CL:0000763!1.33e-22!112;CL:0000049!1.33e-22!112;CL:0002320!2.10e-14!365;CL:0000134!3.76e-14!358;CL:0000034!7.62e-12!444;CL:0000219!1.13e-11!390;CL:0000723!1.44e-11!436;CL:0000048!2.78e-11!430;CL:0000842!2.99e-09!3;CL:0002393!6.84e-08!9;CL:0002397!6.84e-08!9;CL:0000224!5.10e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002393;5.37e-34;6!CL:0002397;5.37e-34;6!CL:0000771;2.74e-12;2!CL:0000576;1.07e-09;48!CL:0000766;1.86e-07;69!CL:0000860;7.05e-07;33!CL:0002057;7.05e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,5.99e-23,9;CL:0002397,5.99e-23,9;CL:0000860,6.02e-19,42;CL:0002057,6.02e-19,42;CL:0000473,1.37e-16,48;CL:0000234,1.37e-16,48;CL:0000766,1.04e-14,72;CL:0002194,2.78e-13,59;CL:0000576,2.78e-13,59;CL:0000040,2.78e-13,59;CL:0000559,2.78e-13,59;CL:0002009,7.43e-13,61;CL:0000771,2.59e-12,2;CL:0000839,6.76e-12,66;CL:0000557,1.01e-11,67;CL:0000738,4.34e-10,136;CL:0000763,8.31e-10,108;CL:0000049,8.31e-10,108;CL:0002087,3.47e-09,115;CL:0002031,8.49e-09,120;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161;CL:0000037,4.03e-08,168;CL:0000988,1.08e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.52e-27!80;UBERON:0001474!2.24e-26!86;UBERON:0002390!2.82e-24!102;UBERON:0003061!2.82e-24!102;UBERON:0002193!2.84e-21!112;UBERON:0004765!3.79e-21!101;UBERON:0001434!3.79e-21!101;UBERON:0002405!8.75e-19!115;UBERON:0002384!1.25e-13!375;UBERON:0002204!4.41e-11!167;UBERON:0003081!1.85e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-10,76;UBERON:0001474,1.34e-09,82;UBERON:0004765,9.48e-09,90;UBERON:0002405,1.81e-08,93;UBERON:0002390,4.90e-08,98;UBERON:0003061,4.90e-08,98;UBERON:0001434,7.10e-08,100;UBERON:0002193,2.73e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,7.20194031091441,2.4065333696417,2.60413044859022,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.564727018627814,0,0,1.53041946185451,0.641858054152187,1.27867425159808,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,1.21079900526674,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0.44931452458598,0.300353785683013,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0.393419540227666,0,1.02800749499755,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TMEM194A | |||
}} |
Revision as of 23:36, 10 September 2013
Short description: | p5@TMEM194A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TMEM194A_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 111bp_to_ENST00000553654_5end |
EntrezGene: | TMEM194A |
HGNC: | 29001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 5.99e-23 | 9 |
CD14-positive, CD16-positive monocyte | 5.99e-23 | 9 |
classical monocyte | 6.02e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.02e-19 | 42 |
defensive cell | 1.37e-16 | 48 |
phagocyte | 1.37e-16 | 48 |
myeloid leukocyte | 1.04e-14 | 72 |
monopoietic cell | 2.78e-13 | 59 |
monocyte | 2.78e-13 | 59 |
monoblast | 2.78e-13 | 59 |
promonocyte | 2.78e-13 | 59 |
macrophage dendritic cell progenitor | 7.43e-13 | 61 |
eosinophil | 2.59e-12 | 2 |
myeloid lineage restricted progenitor cell | 6.76e-12 | 66 |
granulocyte monocyte progenitor cell | 1.01e-11 | 67 |
leukocyte | 4.34e-10 | 136 |
myeloid cell | 8.31e-10 | 108 |
common myeloid progenitor | 8.31e-10 | 108 |
nongranular leukocyte | 3.47e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
hematopoietic stem cell | 4.03e-08 | 168 |
hematopoietic cell | 1.08e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.38e-10 | 76 |
bone element | 1.34e-09 | 82 |
skeletal element | 9.48e-09 | 90 |
immune system | 1.81e-08 | 93 |
hematopoietic system | 4.90e-08 | 98 |
blood island | 4.90e-08 | 98 |
skeletal system | 7.10e-08 | 100 |
hemolymphoid system | 2.73e-07 | 108 |
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