FFCP PHASE1:Hg19::chr12:3862404..3862418,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84766|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28657|TSSclassifier=S|UniProt=D7UEQ6,Q9BSW2|association_with_transcript=-38bp_to_ENST00000444507,ENST00000535507,NM_001144958,NM_032680,uc001qmj.2,uc010sen.1,uc010seo.1_5end|coexpression_cluster_id=C37|description=CAGE_peak_6_at_EFCAB4B_5end|id=chr12:3862404..3862418,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;5.05e-17;3|ontology_enrichment_celltype_v019_2=CL:0000775,3.77e-17,3|ontology_enrichment_development_v019=UBERON:0008801;4.08e-07;1!UBERON:0006298;4.32e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050619,8.03e-07,1;DOID:1357,8.03e-07,1;DOID:4960,8.97e-07,1;DOID:0070004,8.97e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001829;1.54e-12;2!UBERON:0003127;3.35e-12;2!UBERON:0001044;3.56e-09;6!UBERON:0003293;3.56e-09;6!UBERON:0003294;3.56e-09;6!UBERON:0010047;3.56e-09;6!UBERON:0003408;3.56e-09;6!UBERON:0000167;3.56e-09;6!UBERON:0000178;9.71e-09;15!UBERON:0000179;9.71e-09;15!UBERON:0000463;9.71e-09;15!UBERON:0001831;4.08e-07;1!UBERON:0001567;4.08e-07;1!UBERON:0001736;4.32e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.55e-12,2;UBERON:0003127,2.70e-12,2;UBERON:0001044,3.57e-09,6;UBERON:0003293,3.57e-09,6;UBERON:0003294,3.57e-09,6;UBERON:0010047,3.57e-09,6;UBERON:0000167,3.57e-09,6;UBERON:0003408,4.34e-09,10;UBERON:0000178,7.77e-09,15;UBERON:0000179,7.77e-09,15;UBERON:0000463,7.77e-09,15;UBERON:0001831,4.09e-07,1;UBERON:0001567,4.09e-07,1;UBERON:0008801,4.09e-07,1;UBERON:0001736,4.33e-07,1;UBERON:0006298,4.33e-07,1;UBERON:0001764,8.03e-07,1;UBERON:0001825,8.03e-07,1|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0.868043482863407,0.223915474239924,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0.850417199860174,0.838634582033504,0.898629049171961,0.300353785683013,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.822405995998037,0.501559486172034,0.32592226663359,0,0,0.668462741311041,0.294605907474837,0,0.541607727530031,1.40900451698243,1.04047478047903,1.31550323682941,0.829050053357545,1.15921234294021,0.741432815810302,1.33770414044857,0,0.339928028092699,1.14966148080576,0.68725489096526,0.759059076058509,1.27426165729639,0,0,0.301150238155546,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0.10075209822764,0.169560592310488,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0.845302752556,0.531876233169741,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,1.18218456121156,0.215627574859517,0.256686072559497,0,0,0,0,0,1.49801404789436,2.99161459204025,2.07207756718018,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0,1.24060815673732,0,0.74709290462411,0,1.66435439510497,0.30239029332968,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,1.02341449813341,0.64341568457443,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.413509717453592,0.322260734604821,0,0.170453254832202,0,0.165284915360978,0,0.255225424989168,0,0.464845549297286,0,0,0.616067160352178,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84766 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28657 | |||
|TSSclassifier=S | |||
|UniProt=D7UEQ6,Q9BSW2 | |||
|association_with_transcript=-38bp_to_ENST00000444507,ENST00000535507,NM_001144958,NM_032680,uc001qmj.2,uc010sen.1,uc010seo.1_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_6_at_EFCAB4B_5end | |||
|id=chr12:3862404..3862418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.05e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.77e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.08e-07;1!UBERON:0006298;4.32e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.03e-07,1;DOID:1357,8.03e-07,1;DOID:4960,8.97e-07,1;DOID:0070004,8.97e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.54e-12;2!UBERON:0003127;3.35e-12;2!UBERON:0001044;3.56e-09;6!UBERON:0003293;3.56e-09;6!UBERON:0003294;3.56e-09;6!UBERON:0010047;3.56e-09;6!UBERON:0003408;3.56e-09;6!UBERON:0000167;3.56e-09;6!UBERON:0000178;9.71e-09;15!UBERON:0000179;9.71e-09;15!UBERON:0000463;9.71e-09;15!UBERON:0001831;4.08e-07;1!UBERON:0001567;4.08e-07;1!UBERON:0001736;4.32e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.55e-12,2;UBERON:0003127,2.70e-12,2;UBERON:0001044,3.57e-09,6;UBERON:0003293,3.57e-09,6;UBERON:0003294,3.57e-09,6;UBERON:0010047,3.57e-09,6;UBERON:0000167,3.57e-09,6;UBERON:0003408,4.34e-09,10;UBERON:0000178,7.77e-09,15;UBERON:0000179,7.77e-09,15;UBERON:0000463,7.77e-09,15;UBERON:0001831,4.09e-07,1;UBERON:0001567,4.09e-07,1;UBERON:0008801,4.09e-07,1;UBERON:0001736,4.33e-07,1;UBERON:0006298,4.33e-07,1;UBERON:0001764,8.03e-07,1;UBERON:0001825,8.03e-07,1 | |||
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| |||
|short_description=p6@EFCAB4B | |||
}} |
Revision as of 22:31, 10 September 2013
Short description: | p6@EFCAB4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_EFCAB4B_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -38bp_to_ENST00000444507, ENST00000535507, NM_001144958, NM_032680, uc001qmj.2, uc010sen.1, uc010seo.1_5end |
EntrezGene: | EFCAB4B |
HGNC: | 28657 |
UniProt: | D7UEQ6Q9BSW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.77e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.55e-12 | 2 |
open tracheal system trachea | 2.70e-12 | 2 |
saliva-secreting gland | 3.57e-09 | 6 |
gland of oral region | 3.57e-09 | 6 |
gland of foregut | 3.57e-09 | 6 |
oral gland | 3.57e-09 | 6 |
oral cavity | 3.57e-09 | 6 |
gland of gut | 4.34e-09 | 10 |
blood | 7.77e-09 | 15 |
haemolymphatic fluid | 7.77e-09 | 15 |
organism substance | 7.77e-09 | 15 |
parotid gland | 4.09e-07 | 1 |
cheek | 4.09e-07 | 1 |
parotid gland primordium | 4.09e-07 | 1 |
submandibular gland | 4.33e-07 | 1 |
submandibular gland primordium | 4.33e-07 | 1 |
maxillary sinus | 8.03e-07 | 1 |
paranasal sinus | 8.03e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.03e-07 | 1 |
maxillary sinus cancer | 8.03e-07 | 1 |
bone marrow cancer | 8.97e-07 | 1 |
myeloma | 8.97e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.