FFCP PHASE1:Hg19::chr12:3409507..3409539,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:3409507..3409539,+|id=chr12:3409507..3409539,+|ontology_enrichment_celltype=CL:0000066!1.13e-14!254;CL:0000063!1.40e-07!578;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0002076!1.95e-07!43;CL:0000012!2.91e-07!682|ontology_enrichment_celltype_v019=CL:0000135;6.41e-10;3!CL:0000388;6.41e-10;3|ontology_enrichment_celltype_v019_2=CL:0000135,5.24e-10,3;CL:0000388,5.24e-10,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.65e-14!106;DOID:1749!2.18e-11!14;DOID:0050687!2.76e-11!143;DOID:14566!4.27e-07!239|ontology_enrichment_disease_v019=DOID:1749;5.63e-23;14!DOID:4556;1.92e-10;3!DOID:3151;6.85e-08;1!DOID:3149;6.85e-08;1|ontology_enrichment_disease_v019_2=DOID:1749,6.35e-23,14;DOID:305,3.95e-13,106;DOID:4556,1.92e-10,3;DOID:0050687,6.45e-09,143;DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1|ontology_enrichment_uberon=UBERON:0003102!6.96e-11!95;UBERON:0000161!5.94e-09!35;UBERON:0004119!5.32e-08!169;UBERON:0000925!5.32e-08!169;UBERON:0006595!5.32e-08!169|ontology_enrichment_uberon_v019=UBERON:0007846;6.41e-10;3!UBERON:0000043;6.41e-10;3!UBERON:0007845;6.41e-10;3!UBERON:0003343;1.20e-07;4!UBERON:0004785;1.20e-07;4!UBERON:0002394;1.75e-07;4!UBERON:0003928;1.75e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.24e-10,3;UBERON:0000043,5.24e-10,3;UBERON:0007845,5.24e-10,3;UBERON:0003343,1.39e-07,4;UBERON:0004785,1.39e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.286836620748814,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0.408308342509787,0.61417158655884,0.206651562351531,0,0,0,0,0.336672227908132,0,0.554128230968366,0.438977620880838,0.30648779579902,0,0.113432183160021,0.717558542755448,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0.502644862058154,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0.283550194484773,0.716468181622786,0.871901815541886,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0.739144404124282,1.03850885836724,0.464841513839837,0,0.200506470303285,0.552485933615378,0.34444334449382,1.0925470080403,0.524497659837696,0.902399225814824,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0.384380134730212,1.14851441245126,0.708104465988849,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.633322905892992,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0.23874448473769,0,0,0,0,1.44701316529778,0,0,0,0,0,0.20453736500431,0,0.311039587661807,1.25815691606258,1.43216939740487,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,3.76444109552229,0,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,2.15231080825299,0,0,0,0,0,2.55549813004637,0,0,0,0,1.19472429772959,0,0.138674673013139,0.173559738335131,0.195984794828755,1.21882889212564,0,0.343972064943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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:3409507..3409539,+ | |||
|id=chr12:3409507..3409539,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.13e-14!254;CL:0000063!1.40e-07!578;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0002076!1.95e-07!43;CL:0000012!2.91e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000135;6.41e-10;3!CL:0000388;6.41e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.24e-10,3;CL:0000388,5.24e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.65e-14!106;DOID:1749!2.18e-11!14;DOID:0050687!2.76e-11!143;DOID:14566!4.27e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.63e-23;14!DOID:4556;1.92e-10;3!DOID:3151;6.85e-08;1!DOID:3149;6.85e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.35e-23,14;DOID:305,3.95e-13,106;DOID:4556,1.92e-10,3;DOID:0050687,6.45e-09,143;DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.96e-11!95;UBERON:0000161!5.94e-09!35;UBERON:0004119!5.32e-08!169;UBERON:0000925!5.32e-08!169;UBERON:0006595!5.32e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.41e-10;3!UBERON:0000043;6.41e-10;3!UBERON:0007845;6.41e-10;3!UBERON:0003343;1.20e-07;4!UBERON:0004785;1.20e-07;4!UBERON:0002394;1.75e-07;4!UBERON:0003928;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.24e-10,3;UBERON:0000043,5.24e-10,3;UBERON:0007845,5.24e-10,3;UBERON:0003343,1.39e-07,4;UBERON:0004785,1.39e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.286836620748814,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0.408308342509787,0.61417158655884,0.206651562351531,0,0,0,0,0.336672227908132,0,0.554128230968366,0.438977620880838,0.30648779579902,0,0.113432183160021,0.717558542755448,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0.502644862058154,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0.283550194484773,0.716468181622786,0.871901815541886,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0.739144404124282,1.03850885836724,0.464841513839837,0,0.200506470303285,0.552485933615378,0.34444334449382,1.0925470080403,0.524497659837696,0.902399225814824,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0.384380134730212,1.14851441245126,0.708104465988849,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.633322905892992,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0.23874448473769,0,0,0,0,1.44701316529778,0,0,0,0,0,0.20453736500431,0,0.311039587661807,1.25815691606258,1.43216939740487,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,3.76444109552229,0,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,2.15231080825299,0,0,0,0,0,2.55549813004637,0,0,0,0,1.19472429772959,0,0.138674673013139,0.173559738335131,0.195984794828755,1.21882889212564,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0.685209623233754,0.19871461170299,0,0.195551382734803,0.160317640503067,0.213452994739353,0.39961921916426,0,0.114536596165916,0,1.1524383839052,0.124252535565433,0.471388069233591,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,1.0063040627978,0,0,7.18082288331964,0,6.71703190618059,0,0,0,0,0,0.979762080328227,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0.447764408660622,0,0,0.189403005275089,0,0.889811221596536,0,0,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0.521745061811734,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0.353378291891762,0.38582807654183,0,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0.184105950251841,0.839277046316667,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,2.55184068102667,0.11796972334774,1.10057159113007,0.462102664601353,0.381382095467167,0,0,0,0.40341013740704,0,0,0.49131575253029,0.887136517302272,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,0.222462803784138,0,0,0,0,2.37520350340484,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,3.01159151174194,0.118332000730565,0.511280428554946,0,0.9164274741762,0.62041277132864,0,0.223710863595585,8.53907032452614,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| |||
|short_description=p@chr12:3409507..3409539,+ | |||
}} |
Revision as of 22:30, 10 September 2013
Short description: | p@chr12:3409507..3409539, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:3409507..3409539, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.24e-10 | 3 |
tendon cell | 5.24e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.24e-10 | 3 |
tendon | 5.24e-10 | 3 |
regular connective tissue | 5.24e-10 | 3 |
mucosa of oral region | 1.39e-07 | 4 |
respiratory system mucosa | 1.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.35e-23 | 14 |
carcinoma | 3.95e-13 | 106 |
lung large cell carcinoma | 1.92e-10 | 3 |
cell type cancer | 6.45e-09 | 143 |
skin squamous cell carcinoma | 1.21e-07 | 1 |
keratoacanthoma | 1.21e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.