FFCP PHASE1:Hg19::chr12:3278109..3278123,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C19|description=CAGE_peak_at_chr12:3278109..3278123,+|id=chr12:3278109..3278123,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000322;6.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0000322,7.76e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060084!3.19e-08!3;DOID:127!3.19e-08!3;DOID:2394!2.11e-07!14|ontology_enrichment_disease_v019=DOID:4074;2.12e-11;2!DOID:4905;2.12e-11;2!DOID:3498;2.12e-11;2!DOID:3910;3.34e-11;2!DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3|ontology_enrichment_disease_v019_2=DOID:4074,2.02e-11,2;DOID:4905,2.02e-11,2;DOID:3498,2.02e-11,2;DOID:3910,4.09e-11,2;DOID:0060084,5.54e-08,3;DOID:127,5.54e-08,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.09e-11,2;UBERON:0002173,4.09e-11,2;UBERON:0002186,4.09e-11,2;UBERON:0004821,7.76e-08,3;UBERON:0003215,7.76e-08,3;UBERON:0010368,7.76e-08,3;UBERON:0009911,7.76e-08,3;UBERON:0002299,7.76e-08,3;UBERON:0006524,7.76e-08,3;UBERON:0008874,7.76e-08,3;UBERON:0002169,7.76e-08,3;UBERON:0004894,7.76e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.541892875087706,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0,2.14245036494787,0,0,0,0,0.20453736500431,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,0,0,2.18502341580683,0,0,0,0,10.071669100771,0,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0,0,0,0,0,0,0,0.959293472527256,0,0,0,0.721429382263803,0,0,0,0,0,0.288109595976299,0,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0.864221491201268,1.95952416065645,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0,0,1.32920857278997,0,1.05180326298053,0.761610424337591,0.406870733204662,0.727394636810238,0.429642228169954,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.926404341482917,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0.332660356546013,0,0.320182037633146,0,0,0,0,0,0,0,0|short_description=p@chr12:3278109..3278123,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr12:3278109..3278123,+ | |||
|id=chr12:3278109..3278123,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!3.19e-08!3;DOID:127!3.19e-08!3;DOID:2394!2.11e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.12e-11;2!DOID:4905;2.12e-11;2!DOID:3498;2.12e-11;2!DOID:3910;3.34e-11;2!DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.02e-11,2;DOID:4905,2.02e-11,2;DOID:3498,2.02e-11,2;DOID:3910,4.09e-11,2;DOID:0060084,5.54e-08,3;DOID:127,5.54e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.09e-11,2;UBERON:0002173,4.09e-11,2;UBERON:0002186,4.09e-11,2;UBERON:0004821,7.76e-08,3;UBERON:0003215,7.76e-08,3;UBERON:0010368,7.76e-08,3;UBERON:0009911,7.76e-08,3;UBERON:0002299,7.76e-08,3;UBERON:0006524,7.76e-08,3;UBERON:0008874,7.76e-08,3;UBERON:0002169,7.76e-08,3;UBERON:0004894,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.541892875087706,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0,2.14245036494787,0,0,0,0,0.20453736500431,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,0,0,2.18502341580683,0,0,0,0,10.071669100771,0,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0,0,0,0,0,0,0,0.959293472527256,0,0,0,0.721429382263803,0,0,0,0,0,0.288109595976299,0,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0.864221491201268,1.95952416065645,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0,0,1.32920857278997,0,1.05180326298053,0.761610424337591,0.406870733204662,0.727394636810238,0.429642228169954,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.926404341482917,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0.332660356546013,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:3278109..3278123,+ | |||
}} |
Revision as of 22:30, 10 September 2013
Short description: | p@chr12:3278109..3278123, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:3278109..3278123, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.09e-11 | 2 |
alveolar duct | 4.09e-11 | 2 |
bronchiole | 4.09e-11 | 2 |
pulmonary alveolus epithelium | 7.76e-08 | 3 |
alveolus | 7.76e-08 | 3 |
pulmonary lobule | 7.76e-08 | 3 |
lobule | 7.76e-08 | 3 |
alveolus of lung | 7.76e-08 | 3 |
alveolar system | 7.76e-08 | 3 |
pulmonary acinus | 7.76e-08 | 3 |
alveolar sac | 7.76e-08 | 3 |
alveolar wall | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.02e-11 | 2 |
pancreatic carcinoma | 2.02e-11 | 2 |
pancreatic ductal adenocarcinoma | 2.02e-11 | 2 |
lung adenocarcinoma | 4.09e-11 | 2 |
cell type benign neoplasm | 5.54e-08 | 3 |
leiomyoma | 5.54e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.