FFCP PHASE1:Hg19::chr12:32687273..32687303,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=121512|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19125|TSSclassifier=W|UniProt=E9PJX4|association_with_transcript=15bp_to_ENST00000525053,uc010ske.1_5end|description=CAGE_peak_5_at_FGD4_5end|id=chr12:32687273..32687303,+|ontology_enrichment_celltype=CL:0000057!3.99e-08!75;CL:0000055!8.24e-07!180|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000136,1.91e-07,15;CL:0000057,2.69e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.61e-15!115;UBERON:0000479!2.38e-07!787|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.43e-11,114;UBERON:0004457,9.28e-07,12;UBERON:0000042,9.28e-07,12|phase1_expression=10.9007027562334,4.06790995392868,10.9944435194858,6.00439790118782,4.46961094427288,6.10636966870258,0,0,1.30592814099919,0,0,0,0,18.4411865910469,12.5931002776608,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0,0,0.572471974262113,0,1.63205431473244,0,0,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,1.08454080812422,0.142169232487422,0.293600439334847,0,0.401088894940283,0.651032612147555,5.15005590751826,8.42123531649347,8.24241816429397,0.436194716338694,1.13362783106643,0.485168122375632,0.464858073811369,0.822335776043652,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,1.35426486594342,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.75374599577023,0,0.434377689410233,1.21079900526674,0,0.316462387440884,4.64761629886272,1.91343869968539,1.88692780957538,2.3589012540764,2.70318407114711,1.28580469357664,4.56020389985998,4.77400025277816,2.37463399894024,1.75996244461323,3.27683166757279,3.55803701545422,1.28019066769952,1.60158394814405,1.14950487990897,0,0.954053754535364,1.70763890732835,0.587237189370939,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.710331756132051,0,0,0,0,0,0.670700859703636,0.12786256184353,8.67453965722959,13.0347856765331,3.76600949298142,0.795285947051099,1.94653948121054,0.378139268656271,0.221729397462564,0.263504357079378,1.76821751921912,0,0,0,0,0,0,0,0.371457501329565,3.18019851786728,0,0.694281003215189,0.56530794192401,1.67799774483962,0.825354125820202,0.626984899610432,1.29208379584664,1.06729878806013,2.00832367658802,0.805658634218294,0,0,2.20597848207521,1.62028389576352,2.32179293538607,1.57170560838319,0.788280363383256,0,0,0.183201743930407,2.63560834872127,0,0,3.97577561356255,4.30543739659571,7.28250494472703,4.30254931123221,1.06400514659507,2.24271040056923,2.1349799145941,0.24666754841716,1.8672662123986,1.75123873690594,1.63461903113459,1.51357427644931,0.576175924479999,0.234321431833797,0,0,0.448346041655403,0.939475989150119,1.45685649931318,1.68540968042698,6.1246251376468,0.245668634623536,3.20309921644873,0,0,0,0,0.168336113954066,0.375355559615893,9.14311581097804,0.438977620880838,0.612975591598039,0.45071417671979,3.51639767796065,5.38168907066586,2.13557388818567,2.54318281391474,0.900273288253207,1.8549455262919,7.9868567414145,4.09457083929498,1.5189869901714,0.68205903612839,1.26216887122057,2.48534726334208,4.20279747728911,2.84007674013291,2.01504196455281,1.86516651541536,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,9.28735856063958,3.60939740834793,0.236613600079688,0,0,0.220587945464788,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,8.87285243752816,5.89696330006576,5.31710916013264,0,0.614942192715568,0.857839051492628,0,0,0,0,0.977424915930974,0,0,0.34779121492523,2.11335649624479,0.721832238805369,0.462985512576611,0.951270761172991,0.790204397959275,0,1.72351904261178,0,0.445893486866185,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.571481048629521,1.14596527667483,1.17217447210047,0,0.514137463516618,0.901029173531752,0.571652865261156,1.12131084345361,0,1.98013371716565,1.80980402060889,3.57656445851882,1.690605505112,2.12750493267896,1.04007436911366,0.771622122786426,0,0,2.14466990487221,0.542621605391443,0,0.325736184293735,2.13235169245527,0,0.301439377059586,0,0.499864955910285,2.43247561282381,2.00902836572851,4.21667878966063,4.31324739884849,1.14861935834114,0,16.0707250401013,4.72595541865882,3.9393411912777,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,19.7533301667815,10.5035809422532,5.15403545029498,6.03115498439341,3.7470087647404,2.05013139544115,1.87426263988341,0.902838299183157,0,1.03473071292505,0.664225598535437,2.21243002250044,5.21301686808497,0.783204629850962,0.686286847621712,1.03384013061444,0.215714200818617,0.640365346820666,0,0,0,2.97729369382532,6.44540287809862,1.12264037773229,5.76626171650654,7.163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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=121512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |||
|TSSclassifier=W | |||
|UniProt=E9PJX4 | |||
|association_with_transcript=15bp_to_ENST00000525053,uc010ske.1_5end | |||
|description=CAGE_peak_5_at_FGD4_5end | |||
|id=chr12:32687273..32687303,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.99e-08!75;CL:0000055!8.24e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.91e-07,15;CL:0000057,2.69e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-15!115;UBERON:0000479!2.38e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.43e-11,114;UBERON:0004457,9.28e-07,12;UBERON:0000042,9.28e-07,12 | |||
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| |||
|short_description=p5@FGD4 | |||
}} |
Revision as of 22:30, 10 September 2013
Short description: | p5@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FGD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000525053, uc010ske.1_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | E9PJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.91e-07 | 15 |
fibroblast | 2.69e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.43e-11 | 114 |
cavity lining | 9.28e-07 | 12 |
serous membrane | 9.28e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.