FFCP PHASE1:Hg19::chr12:24967345..24967355,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=976|TSSclassifier=N|UniProt=|association_with_transcript=239bp_to_AK025615_5end|description=CAGE_peak_7_at_BCAT1_5end|id=chr12:24967345..24967355,-|ontology_enrichment_celltype=CL:0000548!1.31e-15!679;CL:0000004!1.31e-15!679;CL:0000255!1.31e-15!679;CL:0000012!5.56e-15!682;CL:0000144!9.66e-13!625;CL:0000003!3.48e-09!722;CL:0000048!2.18e-07!430;CL:0002371!3.04e-07!591;CL:0000034!4.56e-07!444;CL:0000055!6.75e-07!180;CL:0000723!8.00e-07!436|ontology_enrichment_celltype_v019=CL:0000039;4.23e-07;7!CL:0000586;4.23e-07;7|ontology_enrichment_celltype_v019_2=CL:0000039,4.24e-07,7;CL:0000586,4.24e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.32e-08!239;DOID:162!1.82e-08!235;DOID:2394!2.31e-07!14|ontology_enrichment_disease_v019=DOID:2394;2.21e-11;14|ontology_enrichment_disease_v019_2=DOID:2394,9.04e-12,14;DOID:193,7.23e-07,29|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000991;1.76e-10;21|ontology_enrichment_uberon_v019_2=UBERON:0000991,6.39e-11,21;UBERON:0009196,6.39e-11,21;UBERON:0009117,6.39e-11,21;UBERON:0005564,6.39e-11,21;UBERON:0004176,2.79e-10,22|phase1_expression=0.54503513781167,0.428201047781966,0.845726424575827,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,4.82155622419182,2.19093027116212,0.975865597581014,0.123121058076788,0,0,0,1.09499540058307,0.251085279189606,0.458480434487708,0.57470412614962,0.157421562627358,0,0,0,0,0,0,1.23947520928483,1.13735385989937,0,0,0,0,0.447830948479849,0,0.257575567634187,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,1.6446715520873,0,0,0.256160706529101,0.236482229888585,1.37898272294647,1.29096936716765,0,1.12945403725563,0.818718450173537,1.34834090667051,1.22433556948361,0.641858054152187,0,0,0.398927315243264,0.426224750532694,1.45104619314292,0.56738522469114,0,0.251248665256743,0.521482918420201,0.65156653411535,0,0,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,1.80719576192283,0,0.869079113764942,0,0.486634870302636,0.378139268656271,0.443458794925128,1.22968699970376,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,1.6507082516404,0.417989933073621,0.516833518338658,0,0,1.20848795132744,0.760272105718513,0.488124115096339,0.735326160691737,0,0.892997282840798,0,0.337834441449967,0,0,0.366403487860815,0,0,0,2.48485975847659,0.633152558322899,0.397227542439656,0.286836620748814,2.12801029319014,0,0,0.49333509683432,0.311211035399766,1.88594940897563,1.14423332179421,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.298897361103602,1.29177948508141,0.647491777472526,0.280901613404497,0.61246251376468,0.982674538494144,0.516628905878827,0,0.989067717114227,0,0,1.17835279767846,0.750711119231785,0.554128230968366,0,1.5324389789951,0.901428353439581,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.744467425326359,0.675105328965065,0,0.757301322732344,0.368199594569197,0.323292113637624,0,0.403008392910561,0,0.386521706326594,0.272746120590835,0,0.365921118388786,0.927708378250397,0.580969714347592,0.518305275076852,0.504641701751257,2.18986415445498,0,0,0,0.464367928031979,1.44375896333917,0.473227200159376,0,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.368965315629341,0.686271241194102,0,0,0,0.555530670951178,0.325808305310325,0,1.44331342025273,0.115930404975077,1.05667824812239,0.144366447761074,0.925971025153221,1.52203321787679,0,0,0.738651018262192,2.34004265139238,0.743155811443641,0.93733833986777,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.4400297149257,1.29271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,1.00084595560703,0,0,0.977208552881205,0.710783897485092,0.791951872933429,1.50719688529793,0,0.99972991182057,1.2162378064119,0,4.21667878966063,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,2.35378802386407,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,1.89885516589815,2.07970861530807,0.713715955188647,1.73472656537328,0.585707074963566,0,0,0,0.664225598535437,1.10621501125022,0,0,0,0,0,0,0.303127571446259,0,0,0.992431231275107,0.460385919864187,1.12264037773229,0.896974044789907,0,1.44768529029247,0,1.23367755042124,0,0.492762936082855,0.519254429183621,0.697262270759755,0.362578348774867,0,0.184161977871793,0.574072240823034,1.63882051206045,0.786746489756545,0,0.0770153371044148,0,0,0.422206515571503,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0,0,1.53870075069834,0.328014645699706,0.650756789328606,0.20608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365733,0.813792356631477,0,0,0.641136984606466|short_description=p7@BCAT1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=976 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=239bp_to_AK025615_5end | |||
|description=CAGE_peak_7_at_BCAT1_5end | |||
|id=chr12:24967345..24967355,- | |||
|ontology_enrichment_celltype=CL:0000548!1.31e-15!679;CL:0000004!1.31e-15!679;CL:0000255!1.31e-15!679;CL:0000012!5.56e-15!682;CL:0000144!9.66e-13!625;CL:0000003!3.48e-09!722;CL:0000048!2.18e-07!430;CL:0002371!3.04e-07!591;CL:0000034!4.56e-07!444;CL:0000055!6.75e-07!180;CL:0000723!8.00e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.23e-07;7!CL:0000586;4.23e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.24e-07,7;CL:0000586,4.24e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.32e-08!239;DOID:162!1.82e-08!235;DOID:2394!2.31e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.21e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.04e-12,14;DOID:193,7.23e-07,29 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;1.76e-10;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,6.39e-11,21;UBERON:0009196,6.39e-11,21;UBERON:0009117,6.39e-11,21;UBERON:0005564,6.39e-11,21;UBERON:0004176,2.79e-10,22 | |||
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| |||
|short_description=p7@BCAT1 | |||
}} |
Revision as of 22:13, 10 September 2013
Short description: | p7@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_BCAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 239bp_to_AK025615_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.24e-07 | 7 |
germ cell | 4.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gonad | 6.39e-11 | 21 |
indifferent external genitalia | 6.39e-11 | 21 |
indifferent gonad | 6.39e-11 | 21 |
gonad primordium | 6.39e-11 | 21 |
external genitalia | 2.79e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.04e-12 | 14 |
reproductive organ cancer | 7.23e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.