FFCP PHASE1:Hg19::chr12:125111152..125111184,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C65|description=CAGE_peak_at_chr12:125111152..125111184,+|id=chr12:125111152..125111184,+|ontology_enrichment_celltype=CL:0000860!1.76e-50!45;CL:0002057!3.29e-47!42;CL:0002194!6.35e-36!63;CL:0000576!6.35e-36!63;CL:0000040!6.35e-36!63;CL:0000559!6.35e-36!63;CL:0002009!2.46e-34!65;CL:0000839!9.08e-31!70;CL:0000766!3.11e-30!76;CL:0000557!4.07e-30!71;CL:0000763!1.41e-15!112;CL:0000049!1.41e-15!112;CL:0002087!2.85e-15!119;CL:0000738!4.33e-13!140;CL:0002031!9.06e-12!124;CL:0002393!5.36e-09!9;CL:0002397!5.36e-09!9;CL:0000037!4.98e-08!172;CL:0000566!4.98e-08!172;CL:0000988!7.49e-08!182;CL:0002032!7.71e-07!165;CL:0000837!7.71e-07!165|ontology_enrichment_celltype_v019=CL:0000860;2.23e-64;33!CL:0002057;2.23e-64;33!CL:0000473;1.18e-46;39!CL:0000234;1.18e-46;39!CL:0000576;4.85e-38;48!CL:0000766;1.04e-20;69!CL:0002087;2.09e-09;104!CL:0000763;8.87e-09;100!CL:0000738;2.89e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,2.73e-66,42;CL:0002057,2.73e-66,42;CL:0000473,1.88e-57,48;CL:0000234,1.88e-57,48;CL:0002194,4.53e-45,59;CL:0000576,4.53e-45,59;CL:0000040,4.53e-45,59;CL:0000559,4.53e-45,59;CL:0002009,1.80e-43,61;CL:0000839,6.80e-40,66;CL:0000557,3.06e-39,67;CL:0000766,3.03e-36,72;CL:0002087,2.21e-23,115;CL:0000763,8.80e-23,108;CL:0000049,8.80e-23,108;CL:0002031,4.51e-20,120;CL:0000738,4.47e-19,136;CL:0000037,1.43e-14,168;CL:0002032,7.64e-14,161;CL:0000837,7.64e-14,161;CL:0000988,1.35e-13,177|ontology_enrichment_development_v019=CL:0002057;6.22e-48;42!CL:0000049;7.85e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.28e-25!80;UBERON:0001474!2.98e-23!86;UBERON:0002390!2.16e-21!102;UBERON:0003061!2.16e-21!102;UBERON:0004765!1.25e-20!101;UBERON:0001434!1.25e-20!101;UBERON:0002193!6.00e-19!112;UBERON:0002405!2.60e-15!115;UBERON:0000926!1.12e-11!448;UBERON:0004120!1.12e-11!448;UBERON:0006603!1.12e-11!448;UBERON:0003081!1.20e-11!216;UBERON:0002204!3.00e-11!167|ontology_enrichment_uberon_v019=UBERON:0000997;3.10e-07;1!UBERON:0002171;3.10e-07;1!UBERON:0005056;3.10e-07;1!UBERON:0006518;3.10e-07;1!UBERON:0008949;3.10e-07;1!UBERON:0004176;3.10e-07;1!UBERON:0000101;3.10e-07;1!UBERON:0002167;3.10e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-34,76;UBERON:0001474,2.46e-31,82;UBERON:0002390,3.34e-28,98;UBERON:0003061,3.34e-28,98;UBERON:0004765,3.49e-28,90;UBERON:0002405,3.86e-27,93;UBERON:0002193,3.48e-25,108;UBERON:0001434,6.04e-25,100;UBERON:0003081,7.68e-14,203;UBERON:0002204,3.46e-13,167;UBERON:0000926,7.14e-10,315;UBERON:0004120,7.14e-10,315;UBERON:0006603,7.14e-10,315;UBERON:0002171,2.35e-07,1;UBERON:0006518,2.35e-07,1;UBERON:0008949,2.35e-07,1;UBERON:0000101,2.35e-07,1;UBERON:0002167,2.35e-07,1;UBERON:0000997,3.62e-07,1;UBERON:0005056,3.62e-07,1|phase1_expression=0,0,0,0,0,0,5.06599756336621,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.20326668482085,1.08505435357926,0.223915474239924,0.32389366601898,0,2.76256653681173,0.755751887377619,0.970336244751265,3.48643555358527,1.6446715520873,5.26500830521676,1.7261543539329,0.512321413058201,2.12834006899727,4.13694816883942,1.93645405075148,6.77132432971709,10.3533286748433,2.45615535052061,3.14612878223118,4.59125838556354,3.53021929783703,3.83602275479425,0.989553900560148,0.598390972864896,1.27867425159808,2.32167390902867,0,0.622822248995575,2.26123798731069,1.0429658368404,1.52032191293582,0.605399502633369,0,0.316462387440884,0.845021145247767,0.637812899895131,0.209658645508376,0.336985893439485,0.450530678524519,0.48217676009124,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0,3.06633274931766,0,0.549605231791222,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0.206768026122887,3.01999881146064,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.137333840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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_at_chr12:125111152..125111184,+ | |||
|id=chr12:125111152..125111184,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.76e-50!45;CL:0002057!3.29e-47!42;CL:0002194!6.35e-36!63;CL:0000576!6.35e-36!63;CL:0000040!6.35e-36!63;CL:0000559!6.35e-36!63;CL:0002009!2.46e-34!65;CL:0000839!9.08e-31!70;CL:0000766!3.11e-30!76;CL:0000557!4.07e-30!71;CL:0000763!1.41e-15!112;CL:0000049!1.41e-15!112;CL:0002087!2.85e-15!119;CL:0000738!4.33e-13!140;CL:0002031!9.06e-12!124;CL:0002393!5.36e-09!9;CL:0002397!5.36e-09!9;CL:0000037!4.98e-08!172;CL:0000566!4.98e-08!172;CL:0000988!7.49e-08!182;CL:0002032!7.71e-07!165;CL:0000837!7.71e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-64;33!CL:0002057;2.23e-64;33!CL:0000473;1.18e-46;39!CL:0000234;1.18e-46;39!CL:0000576;4.85e-38;48!CL:0000766;1.04e-20;69!CL:0002087;2.09e-09;104!CL:0000763;8.87e-09;100!CL:0000738;2.89e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.73e-66,42;CL:0002057,2.73e-66,42;CL:0000473,1.88e-57,48;CL:0000234,1.88e-57,48;CL:0002194,4.53e-45,59;CL:0000576,4.53e-45,59;CL:0000040,4.53e-45,59;CL:0000559,4.53e-45,59;CL:0002009,1.80e-43,61;CL:0000839,6.80e-40,66;CL:0000557,3.06e-39,67;CL:0000766,3.03e-36,72;CL:0002087,2.21e-23,115;CL:0000763,8.80e-23,108;CL:0000049,8.80e-23,108;CL:0002031,4.51e-20,120;CL:0000738,4.47e-19,136;CL:0000037,1.43e-14,168;CL:0002032,7.64e-14,161;CL:0000837,7.64e-14,161;CL:0000988,1.35e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.22e-48;42!CL:0000049;7.85e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.28e-25!80;UBERON:0001474!2.98e-23!86;UBERON:0002390!2.16e-21!102;UBERON:0003061!2.16e-21!102;UBERON:0004765!1.25e-20!101;UBERON:0001434!1.25e-20!101;UBERON:0002193!6.00e-19!112;UBERON:0002405!2.60e-15!115;UBERON:0000926!1.12e-11!448;UBERON:0004120!1.12e-11!448;UBERON:0006603!1.12e-11!448;UBERON:0003081!1.20e-11!216;UBERON:0002204!3.00e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.10e-07;1!UBERON:0002171;3.10e-07;1!UBERON:0005056;3.10e-07;1!UBERON:0006518;3.10e-07;1!UBERON:0008949;3.10e-07;1!UBERON:0004176;3.10e-07;1!UBERON:0000101;3.10e-07;1!UBERON:0002167;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-34,76;UBERON:0001474,2.46e-31,82;UBERON:0002390,3.34e-28,98;UBERON:0003061,3.34e-28,98;UBERON:0004765,3.49e-28,90;UBERON:0002405,3.86e-27,93;UBERON:0002193,3.48e-25,108;UBERON:0001434,6.04e-25,100;UBERON:0003081,7.68e-14,203;UBERON:0002204,3.46e-13,167;UBERON:0000926,7.14e-10,315;UBERON:0004120,7.14e-10,315;UBERON:0006603,7.14e-10,315;UBERON:0002171,2.35e-07,1;UBERON:0006518,2.35e-07,1;UBERON:0008949,2.35e-07,1;UBERON:0000101,2.35e-07,1;UBERON:0002167,2.35e-07,1;UBERON:0000997,3.62e-07,1;UBERON:0005056,3.62e-07,1 | |||
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|short_description=p@chr12:125111152..125111184,+ | |||
}} |
Revision as of 21:35, 10 September 2013
Short description: | p@chr12:125111152..125111184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:125111152..125111184, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.73e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-66 | 42 |
defensive cell | 1.88e-57 | 48 |
phagocyte | 1.88e-57 | 48 |
monopoietic cell | 4.53e-45 | 59 |
monocyte | 4.53e-45 | 59 |
monoblast | 4.53e-45 | 59 |
promonocyte | 4.53e-45 | 59 |
macrophage dendritic cell progenitor | 1.80e-43 | 61 |
myeloid lineage restricted progenitor cell | 6.80e-40 | 66 |
granulocyte monocyte progenitor cell | 3.06e-39 | 67 |
myeloid leukocyte | 3.03e-36 | 72 |
nongranular leukocyte | 2.21e-23 | 115 |
myeloid cell | 8.80e-23 | 108 |
common myeloid progenitor | 8.80e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 4.51e-20 | 120 |
leukocyte | 4.47e-19 | 136 |
hematopoietic stem cell | 1.43e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.64e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.64e-14 | 161 |
hematopoietic cell | 1.35e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-34 | 76 |
bone element | 2.46e-31 | 82 |
hematopoietic system | 3.34e-28 | 98 |
blood island | 3.34e-28 | 98 |
skeletal element | 3.49e-28 | 90 |
immune system | 3.86e-27 | 93 |
hemolymphoid system | 3.48e-25 | 108 |
skeletal system | 6.04e-25 | 100 |
lateral plate mesoderm | 7.68e-14 | 203 |
musculoskeletal system | 3.46e-13 | 167 |
mesoderm | 7.14e-10 | 315 |
mesoderm-derived structure | 7.14e-10 | 315 |
presumptive mesoderm | 7.14e-10 | 315 |
lower lobe of right lung | 2.35e-07 | 1 |
right lung lobe | 2.35e-07 | 1 |
lower lobe of lung | 2.35e-07 | 1 |
lobe of lung | 2.35e-07 | 1 |
right lung | 2.35e-07 | 1 |
mammalian vulva | 3.62e-07 | 1 |
external female genitalia | 3.62e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.