FFCP PHASE1:Hg19::chr12:12510241..12510263,+: Difference between revisions
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{{FFCP | 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792,1.3741032706134,0.243835849964539,0,0.205325613712494,0,3.39997695141398,0.467878926924211,0.596852325484105,0,0.33883824611688,0,0,0.926089897295336,0.874238242015829,2.35158648180761,0.735444965261716,0.942706188406504,1.57046773691956,0.297046400327086,1.2679671827502,0.339854229375634,0.751871343838829,1.4180735354187,1.79894080664872,0.357107877211315,2.47026410200984,0.722172300202514,1.46067277649303,1.37618785021362,0.716697915757256,0,3.94350643107305,0,2.1161073620616,0,0.462175628631418,0.432626562123789,0,0.109265571963696,0.506794004045748,0.407955318967927,0.26721740526556,0.827054095813604,0,0.151557396436479,0.535928260312357,0.829169439458779,0.20686599172379,1.27940389140589,1.90451545170992,0.258355639344024,0.372448285775147,0.112131862580613,0,0.202117188958219,1.30630048738177,0.684466602170562,1.48174516632093,0.645499848534087,0.99798106963804,0.162806537221949,0.213454691755431,0,0.359300808426348,2.34640942403454,0.855690109280065,1.22068853494722,0,1.20764276154616,2.24397944612263|short_description=p4@LOH12CR1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=118426 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17950 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_ENST00000543990_5end | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_4_at_LOH12CR1_5end | |||
|id=chr12:12510241..12510263,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.00e-36!140;CL:0000037!7.39e-29!172;CL:0000566!7.39e-29!172;CL:0002087!1.80e-28!119;CL:0000988!3.84e-28!182;CL:0002031!9.40e-27!124;CL:0002032!1.36e-26!165;CL:0000837!1.36e-26!165;CL:0000766!5.27e-19!76;CL:0000557!1.85e-16!71;CL:0002057!4.66e-16!42;CL:0002009!1.07e-15!65;CL:0002194!9.33e-15!63;CL:0000576!9.33e-15!63;CL:0000040!9.33e-15!63;CL:0000559!9.33e-15!63;CL:0000763!1.84e-14!112;CL:0000049!1.84e-14!112;CL:0000839!3.16e-14!70;CL:0000860!6.38e-14!45;CL:0000542!4.96e-12!53;CL:0000051!4.96e-12!53;CL:0000838!1.24e-11!52;CL:0000945!9.65e-09!24;CL:0000826!9.65e-09!24;CL:0000451!1.06e-07!10;CL:0000134!2.34e-07!358;CL:0002320!5.88e-07!365;CL:0000236!9.02e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-13;33!CL:0002057;1.44e-13;33!CL:0000473;2.36e-13;39!CL:0000234;2.36e-13;39!CL:0000766;6.96e-11;69!CL:0000451;1.74e-10;10!CL:0000576;3.59e-10;48!CL:0002087;5.15e-10;104!CL:0000738;5.43e-10;136!CL:0000945;2.37e-09;24!CL:0000990;1.07e-08;8!CL:0000542;1.28e-08;53!CL:0000094;3.95e-08;8!CL:0000624;1.75e-07;6!CL:0000236;1.89e-07;13!CL:0000988;2.85e-07;177!CL:0000081;8.50e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.37e-47,136;CL:0002087,1.60e-38,115;CL:0000988,6.52e-37,177;CL:0000037,1.08e-36,168;CL:0002032,1.11e-33,161;CL:0000837,1.11e-33,161;CL:0002031,1.86e-33,120;CL:0000766,6.49e-25,72;CL:0000473,8.09e-23,48;CL:0000234,8.09e-23,48;CL:0002009,1.01e-22,61;CL:0002194,2.64e-21,59;CL:0000576,2.64e-21,59;CL:0000040,2.64e-21,59;CL:0000559,2.64e-21,59;CL:0000557,3.23e-21,67;CL:0000860,6.20e-21,42;CL:0002057,6.20e-21,42;CL:0000763,1.45e-18,108;CL:0000049,1.45e-18,108;CL:0000839,5.86e-18,66;CL:0000542,2.11e-14,53;CL:0000051,2.11e-14,53;CL:0000838,7.65e-14,52;CL:0000451,1.20e-10,10;CL:0000945,7.92e-10,24;CL:0000826,7.92e-10,24;CL:0000990,7.27e-09,8;CL:0000236,2.40e-08,14;CL:0000094,3.37e-08,8;CL:0000134,1.42e-07,354;CL:0000624,1.77e-07,6;CL:0002320,4.08e-07,361;CL:0000081,7.53e-07,11;CL:0000840,8.44e-07,5;CL:0001029,8.44e-07,5;CL:0002393,9.05e-07,9;CL:0002397,9.05e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.15e-15;42!CL:0000051;1.28e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.24e-18!102;UBERON:0003061!3.24e-18!102;UBERON:0002371!8.32e-15!80;UBERON:0002193!1.42e-14!112;UBERON:0001474!2.67e-14!86;UBERON:0004765!4.38e-11!101;UBERON:0001434!4.38e-11!101;UBERON:0002405!9.35e-09!115;UBERON:0001869!2.98e-07!32;UBERON:0001893!3.62e-07!34;UBERON:0002619!4.12e-07!22;UBERON:0001950!6.15e-07!20;UBERON:0002780!7.58e-07!41;UBERON:0001890!7.58e-07!41;UBERON:0006240!7.58e-07!41;UBERON:0002791!8.80e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.12e-09;20!UBERON:0002619;1.38e-09;22!UBERON:0001869;1.52e-09;32!UBERON:0002791;1.09e-08;32!UBERON:0001893;1.84e-08;34!UBERON:0003528;1.85e-08;34!UBERON:0002020;1.85e-08;34!UBERON:0000956;9.17e-08;25!UBERON:0000203;9.17e-08;25 | |||
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| |||
|short_description=p4@LOH12CR1 | |||
}} |
Revision as of 21:35, 10 September 2013
Short description: | p4@LOH12CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LOH12CR1_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -28bp_to_ENST00000543990_5end |
EntrezGene: | LOH12CR1 |
HGNC: | 17950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.31e-23 | 98 |
blood island | 5.31e-23 | 98 |
hemolymphoid system | 3.56e-20 | 108 |
bone marrow | 4.46e-19 | 76 |
bone element | 1.28e-17 | 82 |
immune system | 5.62e-16 | 93 |
skeletal element | 2.11e-14 | 90 |
skeletal system | 6.20e-12 | 100 |
cerebral hemisphere | 9.17e-11 | 32 |
neocortex | 8.27e-10 | 20 |
regional part of cerebral cortex | 9.36e-10 | 22 |
telencephalon | 1.15e-09 | 34 |
regional part of telencephalon | 1.28e-09 | 32 |
brain grey matter | 2.74e-09 | 34 |
gray matter | 2.74e-09 | 34 |
regional part of forebrain | 7.80e-09 | 41 |
forebrain | 7.80e-09 | 41 |
anterior neural tube | 7.80e-09 | 41 |
future forebrain | 7.80e-09 | 41 |
cerebral cortex | 6.59e-08 | 25 |
pallium | 6.59e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.