FFCP PHASE1:Hg19::chr12:122228579..122228598,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C489|description=CAGE_peak_at_chr12:122228579..122228598,+|id=chr12:122228579..122228598,+|ontology_enrichment_celltype=CL:0000738!4.75e-51!140;CL:0000037!7.72e-40!172;CL:0000566!7.72e-40!172;CL:0000988!4.68e-39!182;CL:0000766!6.34e-34!76;CL:0002032!1.19e-33!165;CL:0000837!1.19e-33!165;CL:0002031!7.07e-29!124;CL:0002087!3.18e-28!119;CL:0000763!1.09e-26!112;CL:0000049!1.09e-26!112;CL:0002057!6.90e-26!42;CL:0000094!4.55e-25!8;CL:0000860!7.17e-24!45;CL:0000557!1.71e-23!71;CL:0002009!2.44e-21!65;CL:0000839!2.84e-19!70;CL:0000081!5.97e-18!11;CL:0002194!1.59e-17!63;CL:0000576!1.59e-17!63;CL:0000040!1.59e-17!63;CL:0000559!1.59e-17!63;CL:0002393!8.09e-16!9;CL:0002397!8.09e-16!9;CL:0000134!3.63e-14!358;CL:0002320!1.04e-13!365;CL:0000623!1.61e-13!3;CL:0000825!1.61e-13!3;CL:0000767!4.69e-13!3;CL:0000842!5.51e-13!3;CL:0000219!4.32e-12!390;CL:0000034!3.60e-11!444;CL:0000080!6.53e-11!6;CL:0000048!3.73e-10!430;CL:0000723!7.02e-10!436;CL:0000224!7.54e-10!4;CL:0001014!8.19e-10!2;CL:0001016!8.19e-10!2;CL:0000771!8.55e-10!2;CL:0000451!5.19e-09!10;CL:0000453!5.32e-08!5;CL:0000990!1.80e-07!8;CL:0000838!4.13e-07!52;CL:0000840!5.96e-07!5;CL:0001029!5.96e-07!5;CL:0000542!6.16e-07!53;CL:0000051!6.16e-07!53|ontology_enrichment_celltype_v019=CL:0000094;2.27e-46;8!CL:0000081;1.49e-33;11!CL:0000623;4.76e-24;3!CL:0000767;2.83e-23;3!CL:0001014;4.36e-17;2!CL:0001016;4.36e-17;2!CL:0000771;4.53e-17;2!CL:0002393;1.11e-12;6!CL:0002397;1.11e-12;6!CL:0000840;2.31e-12;5!CL:0000775;3.25e-11;3!CL:0000226;3.51e-11;3!CL:0000842;3.51e-11;3!CL:0000990;2.10e-08;8!CL:0000453;2.35e-07;5!CL:0000451;5.88e-07;10|ontology_enrichment_celltype_v019_2=CL:0000094,2.36e-46,8;CL:0000081,1.53e-33,11;CL:0000738,1.71e-28,136;CL:0000623,4.23e-24,3;CL:0000825,4.23e-24,3;CL:0000767,3.18e-23,3;CL:0000037,2.30e-22,168;CL:0000988,4.91e-21,177;CL:0002032,3.01e-19,161;CL:0000837,3.01e-19,161;CL:0000766,4.51e-18,72;CL:0001014,4.19e-17,2;CL:0001016,4.19e-17,2;CL:0000771,4.54e-17,2;CL:0000763,3.43e-15,108;CL:0000049,3.43e-15,108;CL:0000840,2.41e-12,5;CL:0001029,2.41e-12,5;CL:0002031,1.51e-11,120;CL:0000226,2.93e-11,3;CL:0000842,2.93e-11,3;CL:0000775,3.09e-11,3;CL:0002087,2.11e-10,115;CL:0002393,1.29e-08,9;CL:0002397,1.29e-08,9;CL:0000134,1.63e-08,354;CL:0000990,2.15e-08,8;CL:0002320,2.87e-08,361;CL:0000557,6.86e-08,67;CL:0000034,9.95e-08,441;CL:0000219,2.12e-07,386;CL:0000453,2.31e-07,5;CL:0002009,5.61e-07,61;CL:0000451,6.00e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.63e-21!102;UBERON:0003061!1.63e-21!102;UBERON:0002371!2.97e-20!80;UBERON:0002193!4.95e-19!112;UBERON:0001474!1.80e-18!86;UBERON:0004765!6.13e-15!101;UBERON:0001434!6.13e-15!101;UBERON:0002384!4.41e-13!375;UBERON:0002405!1.77e-12!115;UBERON:0002204!5.15e-07!167;UBERON:0003081!6.14e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.21e-08,371;UBERON:0002390,1.36e-07,98;UBERON:0003061,1.36e-07,98;UBERON:0002371,8.23e-07,76;UBERON:0002193,9.97e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,1.85779347979291,0,0,0,0,0,0,23.2678071583389,20.8566225368947,16.2758153036889,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0.580418477257168,0,1.86846674698672,0,0,0.434377689410233,0,1.10483290796269,0.949387162322653,0,0.637812899895131,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,2.64342657158052,5.04457706683382,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3346767244424,4.52817907204986,3.9786341246722,0,0,0,0,0,2.99602809578873,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.94142780736755,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr12:122228579..122228598,+ | |||
|id=chr12:122228579..122228598,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.75e-51!140;CL:0000037!7.72e-40!172;CL:0000566!7.72e-40!172;CL:0000988!4.68e-39!182;CL:0000766!6.34e-34!76;CL:0002032!1.19e-33!165;CL:0000837!1.19e-33!165;CL:0002031!7.07e-29!124;CL:0002087!3.18e-28!119;CL:0000763!1.09e-26!112;CL:0000049!1.09e-26!112;CL:0002057!6.90e-26!42;CL:0000094!4.55e-25!8;CL:0000860!7.17e-24!45;CL:0000557!1.71e-23!71;CL:0002009!2.44e-21!65;CL:0000839!2.84e-19!70;CL:0000081!5.97e-18!11;CL:0002194!1.59e-17!63;CL:0000576!1.59e-17!63;CL:0000040!1.59e-17!63;CL:0000559!1.59e-17!63;CL:0002393!8.09e-16!9;CL:0002397!8.09e-16!9;CL:0000134!3.63e-14!358;CL:0002320!1.04e-13!365;CL:0000623!1.61e-13!3;CL:0000825!1.61e-13!3;CL:0000767!4.69e-13!3;CL:0000842!5.51e-13!3;CL:0000219!4.32e-12!390;CL:0000034!3.60e-11!444;CL:0000080!6.53e-11!6;CL:0000048!3.73e-10!430;CL:0000723!7.02e-10!436;CL:0000224!7.54e-10!4;CL:0001014!8.19e-10!2;CL:0001016!8.19e-10!2;CL:0000771!8.55e-10!2;CL:0000451!5.19e-09!10;CL:0000453!5.32e-08!5;CL:0000990!1.80e-07!8;CL:0000838!4.13e-07!52;CL:0000840!5.96e-07!5;CL:0001029!5.96e-07!5;CL:0000542!6.16e-07!53;CL:0000051!6.16e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.27e-46;8!CL:0000081;1.49e-33;11!CL:0000623;4.76e-24;3!CL:0000767;2.83e-23;3!CL:0001014;4.36e-17;2!CL:0001016;4.36e-17;2!CL:0000771;4.53e-17;2!CL:0002393;1.11e-12;6!CL:0002397;1.11e-12;6!CL:0000840;2.31e-12;5!CL:0000775;3.25e-11;3!CL:0000226;3.51e-11;3!CL:0000842;3.51e-11;3!CL:0000990;2.10e-08;8!CL:0000453;2.35e-07;5!CL:0000451;5.88e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.36e-46,8;CL:0000081,1.53e-33,11;CL:0000738,1.71e-28,136;CL:0000623,4.23e-24,3;CL:0000825,4.23e-24,3;CL:0000767,3.18e-23,3;CL:0000037,2.30e-22,168;CL:0000988,4.91e-21,177;CL:0002032,3.01e-19,161;CL:0000837,3.01e-19,161;CL:0000766,4.51e-18,72;CL:0001014,4.19e-17,2;CL:0001016,4.19e-17,2;CL:0000771,4.54e-17,2;CL:0000763,3.43e-15,108;CL:0000049,3.43e-15,108;CL:0000840,2.41e-12,5;CL:0001029,2.41e-12,5;CL:0002031,1.51e-11,120;CL:0000226,2.93e-11,3;CL:0000842,2.93e-11,3;CL:0000775,3.09e-11,3;CL:0002087,2.11e-10,115;CL:0002393,1.29e-08,9;CL:0002397,1.29e-08,9;CL:0000134,1.63e-08,354;CL:0000990,2.15e-08,8;CL:0002320,2.87e-08,361;CL:0000557,6.86e-08,67;CL:0000034,9.95e-08,441;CL:0000219,2.12e-07,386;CL:0000453,2.31e-07,5;CL:0002009,5.61e-07,61;CL:0000451,6.00e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.63e-21!102;UBERON:0003061!1.63e-21!102;UBERON:0002371!2.97e-20!80;UBERON:0002193!4.95e-19!112;UBERON:0001474!1.80e-18!86;UBERON:0004765!6.13e-15!101;UBERON:0001434!6.13e-15!101;UBERON:0002384!4.41e-13!375;UBERON:0002405!1.77e-12!115;UBERON:0002204!5.15e-07!167;UBERON:0003081!6.14e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.21e-08,371;UBERON:0002390,1.36e-07,98;UBERON:0003061,1.36e-07,98;UBERON:0002371,8.23e-07,76;UBERON:0002193,9.97e-07,108 | |||
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|short_description=p@chr12:122228579..122228598,+ | |||
}} |
Revision as of 21:23, 10 September 2013
Short description: | p@chr12:122228579..122228598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:122228579..122228598, + |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.21e-08 | 371 |
hematopoietic system | 1.36e-07 | 98 |
blood island | 1.36e-07 | 98 |
bone marrow | 8.23e-07 | 76 |
hemolymphoid system | 9.97e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.