FFCP PHASE1:Hg19::chr12:113494516..113494577,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1840|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3060|TSSclassifier=S|UniProt=|association_with_transcript=2bp_to_ENST00000548759_5end|coexpression_cluster_id=C138|description=CAGE_peak_1_at_DTX1_5end|id=chr12:113494516..113494577,+|ontology_enrichment_celltype=CL:0000542!2.72e-16!53;CL:0000051!2.72e-16!53;CL:0000838!1.37e-15!52;CL:0000945!3.91e-13!24;CL:0000826!3.91e-13!24;CL:0000236!6.78e-11!14|ontology_enrichment_celltype_v019=CL:0000945;2.90e-14;24!CL:0000236;2.26e-12;13!CL:0000542;1.52e-10;53|ontology_enrichment_celltype_v019_2=CL:0000542,4.70e-17,53;CL:0000051,4.70e-17,53;CL:0000838,3.14e-16,52;CL:0000945,3.10e-14,24;CL:0000826,3.10e-14,24;CL:0000236,4.09e-13,14|ontology_enrichment_development_v019=CL:0000051;1.52e-10;53!UBERON:0006601;1.94e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.87e-46!115;UBERON:0001017!4.52e-30!82;UBERON:0001049!1.79e-29!57;UBERON:0005068!1.79e-29!57;UBERON:0006241!1.79e-29!57;UBERON:0007135!1.79e-29!57;UBERON:0005743!2.45e-28!86;UBERON:0000073!9.25e-28!94;UBERON:0001016!9.25e-28!94;UBERON:0000955!2.22e-24!69;UBERON:0006238!2.22e-24!69;UBERON:0002616!4.73e-24!59;UBERON:0003080!4.22e-22!42;UBERON:0002780!1.29e-21!41;UBERON:0001890!1.29e-21!41;UBERON:0006240!1.29e-21!41;UBERON:0002020!5.84e-19!34;UBERON:0003528!5.84e-19!34;UBERON:0001893!5.91e-19!34;UBERON:0003075!1.69e-18!86;UBERON:0007284!1.69e-18!86;UBERON:0002791!2.63e-18!33;UBERON:0002346!3.30e-18!90;UBERON:0001869!5.15e-18!32;UBERON:0002619!4.45e-16!22;UBERON:0001950!6.60e-15!20;UBERON:0000956!5.27e-14!25;UBERON:0000203!5.27e-14!25;UBERON:0003056!1.29e-12!61;UBERON:0000924!1.83e-11!173;UBERON:0006601!1.83e-11!173;UBERON:0004121!2.04e-11!169;UBERON:0000153!3.46e-11!129;UBERON:0007811!3.46e-11!129;UBERON:0000033!3.34e-10!123;UBERON:0003076!1.75e-08!15;UBERON:0003057!1.75e-08!15;UBERON:0004732!4.42e-07!13;UBERON:0004733!6.23e-07!12;UBERON:0002028!6.23e-07!12;UBERON:0007277!6.23e-07!12;UBERON:0001871!7.93e-07!7|ontology_enrichment_uberon_v019=UBERON:0003528;5.17e-20;34!UBERON:0002020;5.17e-20;34!UBERON:0001869;5.34e-20;32!UBERON:0001893;6.19e-20;34!UBERON:0002791;9.27e-20;32!UBERON:0002619;1.48e-19;22!UBERON:0002780;2.02e-19;41!UBERON:0001890;2.02e-19;41!UBERON:0000073;2.80e-19;53!UBERON:0002616;2.80e-19;53!UBERON:0001950;3.97e-18;20!UBERON:0000956;2.17e-17;25!UBERON:0000203;2.17e-17;25!UBERON:0007023;1.53e-14;114!UBERON:0000955;3.17e-13;68!UBERON:0001016;7.03e-13;83!UBERON:0001017;7.33e-13;75!UBERON:0002420;7.77e-08;9!UBERON:0007245;7.77e-08;9!UBERON:0010009;7.77e-08;9!UBERON:0010011;7.77e-08;9!UBERON:0000454;7.77e-08;9!UBERON:0004732;9.83e-08;13!UBERON:0000125;1.41e-07;9!UBERON:0002308;1.41e-07;9!UBERON:0004733;1.59e-07;12!UBERON:0002028;1.59e-07;12!UBERON:0001871;2.94e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.31e-52,114;UBERON:0001049,4.07e-35,56;UBERON:0005068,4.07e-35,56;UBERON:0006241,4.07e-35,56;UBERON:0007135,4.07e-35,56;UBERON:0001017,2.69e-33,81;UBERON:0001016,3.63e-33,89;UBERON:0000073,4.68e-33,53;UBERON:0002616,4.68e-33,53;UBERON:0000955,8.91e-29,68;UBERON:0006238,8.91e-29,68;UBERON:0002780,8.33e-27,41;UBERON:0001890,8.33e-27,41;UBERON:0003080,8.33e-27,41;UBERON:0006240,8.33e-27,41;UBERON:0003075,1.28e-23,82;UBERON:0007284,1.28e-23,82;UBERON:0003528,1.61e-23,34;UBERON:0002020,1.61e-23,34;UBERON:0001893,1.64e-23,34;UBERON:0001869,2.40e-22,32;UBERON:0002791,5.15e-22,32;UBERON:0002346,1.62e-21,86;UBERON:0002619,1.55e-19,22;UBERON:0001950,4.39e-18,20;UBERON:0000956,2.28e-17,25;UBERON:0000203,2.28e-17,25;UBERON:0010371,2.96e-17,104;UBERON:0003056,1.06e-16,61;UBERON:0011216,3.02e-16,223;UBERON:0004121,2.49e-12,171;UBERON:0000924,2.49e-12,171;UBERON:0006601,2.49e-12,171;UBERON:0010314,1.78e-10,132;UBERON:0003076,2.33e-09,15;UBERON:0003057,2.33e-09,15;UBERON:0002420,7.32e-08,9;UBERON:0007245,7.32e-08,9;UBERON:0010009,7.32e-08,9;UBERON:0010011,7.32e-08,9;UBERON:0000454,7.32e-08,9;UBERON:0004732,1.16e-07,13;UBERON:0000125,1.32e-07,9;UBERON:0002308,1.32e-07,9;UBERON:0004733,1.86e-07,12;UBERON:0002028,1.86e-07,12;UBERON:0007277,1.86e-07,12;UBERON:0001871,2.98e-07,6|phase1_expression=0,1.71280419112787,0.281908808191942,0,1.34088328328186,0,5.06599756336621,0.631719873426831,16.7158802047897,0,0,0,0,0,0,0,0,0,0,1.60057375499824,0.204000691244253,1.25381888591235,1.43117993565528,0,0,20.1731391174591,18.7189343945876,14.7976268869717,0.393364276848904,0.383829398097213,1.23852898652861,0,0,0,90.7915590801135,74.212339358434,0,0,0.401088894940283,0.217010870715852,1.11957737119962,1.29557466407592,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,12.3197371122926,15.2918811153397,25.7957683620431,17.0692089026603,8.80871171479227,14.3688109988621,15.2040320740518,7.63243003628291,13.661111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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3060 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000548759_5end | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_1_at_DTX1_5end | |||
|id=chr12:113494516..113494577,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.72e-16!53;CL:0000051!2.72e-16!53;CL:0000838!1.37e-15!52;CL:0000945!3.91e-13!24;CL:0000826!3.91e-13!24;CL:0000236!6.78e-11!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.90e-14;24!CL:0000236;2.26e-12;13!CL:0000542;1.52e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.70e-17,53;CL:0000051,4.70e-17,53;CL:0000838,3.14e-16,52;CL:0000945,3.10e-14,24;CL:0000826,3.10e-14,24;CL:0000236,4.09e-13,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.52e-10;53!UBERON:0006601;1.94e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@DTX1 | |||
}} |
Revision as of 20:58, 10 September 2013
Short description: | p1@DTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DTX1_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 2bp_to_ENST00000548759_5end |
EntrezGene: | DTX1 |
HGNC: | 3060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.70e-17 | 53 |
common lymphoid progenitor | 4.70e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.14e-16 | 52 |
lymphocyte of B lineage | 3.10e-14 | 24 |
pro-B cell | 3.10e-14 | 24 |
B cell | 4.09e-13 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.