FFCP PHASE1:Hg19::chr12:111078120..111078129,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79600|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26113|TSSclassifier=S|UniProt=F8VSB8|association_with_transcript=-121bp_to_ENST00000547461_5end|coexpression_cluster_id=C47|description=CAGE_peak_9_at_TCTN1_5end|id=chr12:111078120..111078129,+|ontology_enrichment_celltype=CL:0000945!4.31e-62!24;CL:0000826!4.31e-62!24;CL:0000236!7.65e-55!14;CL:0000838!1.33e-26!52;CL:0000542!4.97e-26!53;CL:0000051!4.97e-26!53;CL:0000785!1.18e-11!2;CL:0000955!1.18e-11!2;CL:0000818!1.18e-11!2;CL:0000954!1.18e-11!2;CL:0000816!1.18e-11!2;CL:0002087!2.08e-09!119;CL:0002031!6.88e-09!124;CL:0000738!1.43e-08!140;CL:0000817!4.72e-08!3;CL:0002032!1.18e-07!165;CL:0000837!1.18e-07!165;CL:0000037!3.48e-07!172;CL:0000566!3.48e-07!172|ontology_enrichment_celltype_v019=CL:0000236;1.13e-110;13!CL:0000945;7.36e-74;24!CL:0000542;9.31e-26;53|ontology_enrichment_celltype_v019_2=CL:0000236,7.75e-103,14;CL:0000945,6.82e-74,24;CL:0000826,6.82e-74,24;CL:0000838,6.33e-34,52;CL:0000542,2.81e-33,53;CL:0000051,2.81e-33,53;CL:0002087,6.45e-15,115;CL:0002031,2.83e-14,120;CL:0000738,1.57e-12,136;CL:0002032,1.72e-10,161;CL:0000837,1.72e-10,161;CL:0000037,5.01e-10,168;CL:0000988,1.75e-09,177|ontology_enrichment_development_v019=CL:0000051;9.31e-26;53|ontology_enrichment_disease=DOID:0060058!2.20e-13!10|ontology_enrichment_disease_v019=DOID:0060058;3.44e-08;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.63e-08,10|ontology_enrichment_uberon=UBERON:0006947!4.72e-08!3;UBERON:0004054!4.72e-08!3;UBERON:0001000!8.49e-07!1;UBERON:0005352!8.49e-07!1|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.32e-07,3;UBERON:0004854,2.32e-07,3;UBERON:0009034,2.32e-07,3;UBERON:0002095,2.32e-07,3;UBERON:0004782,2.32e-07,3;UBERON:0003281,2.32e-07,3;UBERON:0009664,2.32e-07,3;UBERON:0002296,2.32e-07,3;UBERON:0005602,2.32e-07,3;UBERON:0001179,2.32e-07,3;UBERON:0006293,2.32e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0.387336002901508,2.55904618477359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,4.36910889009705,2.66852776159066,0.426730222566507,2.40237592221607,3.4485146397269,3.96626923670917,4.77026877267682,2.84606484554724,1.76171156811282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,3.0981758336728,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@TCTN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26113 | |||
|TSSclassifier=S | |||
|UniProt=F8VSB8 | |||
|association_with_transcript=-121bp_to_ENST00000547461_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_9_at_TCTN1_5end | |||
|id=chr12:111078120..111078129,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.31e-62!24;CL:0000826!4.31e-62!24;CL:0000236!7.65e-55!14;CL:0000838!1.33e-26!52;CL:0000542!4.97e-26!53;CL:0000051!4.97e-26!53;CL:0000785!1.18e-11!2;CL:0000955!1.18e-11!2;CL:0000818!1.18e-11!2;CL:0000954!1.18e-11!2;CL:0000816!1.18e-11!2;CL:0002087!2.08e-09!119;CL:0002031!6.88e-09!124;CL:0000738!1.43e-08!140;CL:0000817!4.72e-08!3;CL:0002032!1.18e-07!165;CL:0000837!1.18e-07!165;CL:0000037!3.48e-07!172;CL:0000566!3.48e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.13e-110;13!CL:0000945;7.36e-74;24!CL:0000542;9.31e-26;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.75e-103,14;CL:0000945,6.82e-74,24;CL:0000826,6.82e-74,24;CL:0000838,6.33e-34,52;CL:0000542,2.81e-33,53;CL:0000051,2.81e-33,53;CL:0002087,6.45e-15,115;CL:0002031,2.83e-14,120;CL:0000738,1.57e-12,136;CL:0002032,1.72e-10,161;CL:0000837,1.72e-10,161;CL:0000037,5.01e-10,168;CL:0000988,1.75e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;9.31e-26;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.20e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.44e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.63e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0006947!4.72e-08!3;UBERON:0004054!4.72e-08!3;UBERON:0001000!8.49e-07!1;UBERON:0005352!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.32e-07,3;UBERON:0004854,2.32e-07,3;UBERON:0009034,2.32e-07,3;UBERON:0002095,2.32e-07,3;UBERON:0004782,2.32e-07,3;UBERON:0003281,2.32e-07,3;UBERON:0009664,2.32e-07,3;UBERON:0002296,2.32e-07,3;UBERON:0005602,2.32e-07,3;UBERON:0001179,2.32e-07,3;UBERON:0006293,2.32e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0.387336002901508,2.55904618477359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,4.36910889009705,2.66852776159066,0.426730222566507,2.40237592221607,3.4485146397269,3.96626923670917,4.77026877267682,2.84606484554724,1.76171156811282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,3.0981758336728,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@TCTN1 | |||
}} |
Revision as of 20:51, 10 September 2013
Short description: | p9@TCTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TCTN1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -121bp_to_ENST00000547461_5end |
EntrezGene: | TCTN1 |
HGNC: | 26113 |
UniProt: | F8VSB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.75e-103 | 14 |
lymphocyte of B lineage | 6.82e-74 | 24 |
pro-B cell | 6.82e-74 | 24 |
lymphoid lineage restricted progenitor cell | 6.33e-34 | 52 |
lymphocyte | 2.81e-33 | 53 |
common lymphoid progenitor | 2.81e-33 | 53 |
nongranular leukocyte | 6.45e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.83e-14 | 120 |
leukocyte | 1.57e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.72e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-10 | 161 |
hematopoietic stem cell | 5.01e-10 | 168 |
hematopoietic cell | 1.75e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.32e-07 | 3 |
gastrointestinal system mesentery | 2.32e-07 | 3 |
stomach region | 2.32e-07 | 3 |
mesentery | 2.32e-07 | 3 |
gastrointestinal system serosa | 2.32e-07 | 3 |
mesentery of stomach | 2.32e-07 | 3 |
gut mesentery | 2.32e-07 | 3 |
dorsal mesentery | 2.32e-07 | 3 |
dorsal mesogastrium | 2.32e-07 | 3 |
peritoneal cavity | 2.32e-07 | 3 |
spleen primordium | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.63e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.