FFCP PHASE1:Hg19::chr11:94439606..94439641,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154810|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17811|TSSclassifier=S|UniProt=F8WDH4|association_with_transcript=9bp_to_ENST00000299004_5end|coexpression_cluster_id=C1158|description=CAGE_peak_2_at_AMOTL1_5end|id=chr11:94439606..94439641,+|ontology_enrichment_celltype=CL:0002076!3.98e-18!43;CL:0000223!3.78e-12!59;CL:0002368!1.84e-11!13;CL:0000066!9.63e-11!254;CL:0002159!2.63e-10!13;CL:0002251!1.90e-09!21;CL:0002202!2.20e-07!9;CL:0002632!2.20e-07!9;CL:0000076!8.83e-07!62;CL:0000622!9.50e-07!5|ontology_enrichment_celltype_v019=CL:0002076;7.66e-20;42!CL:0002368;1.57e-16;13!CL:0002159;9.35e-16;14!CL:0002251;1.43e-12;20!CL:0000622;2.02e-10;5!CL:0002202;9.08e-10;9!CL:0002632;9.08e-10;9!CL:0000240;1.29e-08;6!CL:0000311;1.29e-08;6!CL:0000079;1.29e-08;6!CL:0000237;1.29e-08;6!CL:0000154;1.40e-08;6!CL:0000244;3.21e-08;4!CL:0000731;3.21e-08;4!CL:0000362;9.49e-08;9!CL:0002621;2.47e-07;3!CL:0002166;3.47e-07;3!CL:0002623;7.82e-07;3!CL:0000312;8.36e-07;5!CL:0000307;9.29e-07;3|ontology_enrichment_celltype_v019_2=CL:0002076,1.87e-25,42;CL:0000223,4.09e-19,58;CL:0002368,1.64e-16,13;CL:0002159,9.16e-16,14;CL:0002251,1.49e-12,20;CL:0000066,2.55e-12,253;CL:0000622,2.06e-10,5;CL:0002202,9.47e-10,9;CL:0002632,9.47e-10,9;CL:0000240,1.34e-08,6;CL:0000311,1.34e-08,6;CL:0000079,1.34e-08,6;CL:0000237,1.34e-08,6;CL:0000036,1.34e-08,6;CL:0000357,1.34e-08,6;CL:0000114,1.34e-08,6;CL:0000154,1.42e-08,6;CL:0000076,2.02e-08,63;CL:0000244,3.15e-08,4;CL:0000731,3.15e-08,4;CL:0000362,9.73e-08,9;CL:0002621,2.49e-07,3;CL:0002166,3.43e-07,3;CL:0002077,4.89e-07,34;CL:0002623,7.97e-07,3;CL:0000312,8.62e-07,5;CL:0000068,9.12e-07,3;CL:0000069,9.12e-07,3;CL:0000307,9.12e-07,3;CL:0000377,9.12e-07,3|ontology_enrichment_development_v019=CL:0000223;7.96e-11;58!CL:0000357;1.29e-08;6!CL:0000114;1.29e-08;6!CL:0000377;9.29e-07;3|ontology_enrichment_disease=DOID:1749!5.03e-12!14|ontology_enrichment_disease_v019=DOID:1749;1.22e-15;14|ontology_enrichment_disease_v019_2=DOID:1749,1.28e-15,14|ontology_enrichment_uberon=UBERON:0001004!8.56e-13!72;UBERON:0000166!8.55e-11!21;UBERON:0000161!2.97e-10!35;UBERON:0004119!2.00e-08!169;UBERON:0000925!2.00e-08!169;UBERON:0006595!2.00e-08!169;UBERON:0000165!5.31e-08!28;UBERON:0000930!5.31e-08!28;UBERON:0003102!6.42e-08!95;UBERON:0005631!8.41e-08!14;UBERON:0000158!8.41e-08!14;UBERON:0004175!9.34e-08!25;UBERON:0000065!3.05e-07!53;UBERON:0001044!9.99e-07!6;UBERON:0003293!9.99e-07!6;UBERON:0003294!9.99e-07!6;UBERON:0010047!9.99e-07!6;UBERON:0000167!9.99e-07!6|ontology_enrichment_uberon_v019=UBERON:0000161;1.44e-14;19!UBERON:0000166;1.44e-14;19!UBERON:0000165;7.00e-14;28!UBERON:0001044;1.82e-10;6!UBERON:0003293;1.82e-10;6!UBERON:0003294;1.82e-10;6!UBERON:0010047;1.82e-10;6!UBERON:0003408;1.82e-10;6!UBERON:0000167;1.82e-10;6!UBERON:0000365;8.78e-10;5!UBERON:0000486;1.10e-09;12!UBERON:0007196;1.60e-08;15!UBERON:0001558;1.60e-08;15!UBERON:0005910;4.64e-08;6!UBERON:0000974;5.35e-08;6!UBERON:0004175;1.32e-07;21!UBERON:0001004;1.70e-07;65!UBERON:0001949;2.47e-07;3!UBERON:0003729;2.92e-07;13!UBERON:0001041;3.42e-07;14!UBERON:0000344;9.10e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.22e-18,74;UBERON:0000161,1.67e-17,36;UBERON:0000166,3.20e-16,22;UBERON:0003102,7.79e-16,99;UBERON:0004119,2.03e-13,160;UBERON:0000925,2.03e-13,160;UBERON:0006595,2.03e-13,160;UBERON:0000165,3.43e-13,29;UBERON:0000930,3.43e-13,29;UBERON:0000153,2.25e-12,62;UBERON:0007811,2.25e-12,62;UBERON:0001044,2.24e-10,6;UBERON:0003293,2.24e-10,6;UBERON:0003294,2.24e-10,6;UBERON:0010047,2.24e-10,6;UBERON:0000167,2.24e-10,6;UBERON:0003408,2.93e-10,10;UBERON:0000365,8.63e-10,5;UBERON:0000033,8.95e-10,56;UBERON:0000065,1.29e-09,54;UBERON:0004175,1.43e-08,25;UBERON:0007196,1.70e-08,15;UBERON:0001558,1.70e-08,15;UBERON:0000974,2.37e-08,10;UBERON:0001444,3.98e-08,49;UBERON:0005910,4.57e-08,6;UBERON:0001007,6.67e-08,145;UBERON:0001555,6.67e-08,145;UBERON:0007026,6.67e-08,145;UBERON:0001949,2.49e-07,3;UBERON:0006562,2.90e-07,11;UBERON:0003729,2.95e-07,13;UBERON:0005181,6.50e-07,35;UBERON:0000072,6.55e-07,47;UBERON:0004921,7.37e-07,118;UBERON:0000344,9.14e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.873765488520689,0.527533956456907,0,0,6.72325146451775,3.01347264011988,2.19093027116212,1.95173119516203,0,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0,0,0.309632246632152,21.1466881630153,21.9880320708123,20.3364705591733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,14.5718115317017,21.8762821242813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,29.2183014935498,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=154810 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17811 | |||
|TSSclassifier=S | |||
|UniProt=F8WDH4 | |||
|association_with_transcript=9bp_to_ENST00000299004_5end | |||
|coexpression_cluster_id=C1158 | |||
|description=CAGE_peak_2_at_AMOTL1_5end | |||
|id=chr11:94439606..94439641,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.98e-18!43;CL:0000223!3.78e-12!59;CL:0002368!1.84e-11!13;CL:0000066!9.63e-11!254;CL:0002159!2.63e-10!13;CL:0002251!1.90e-09!21;CL:0002202!2.20e-07!9;CL:0002632!2.20e-07!9;CL:0000076!8.83e-07!62;CL:0000622!9.50e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.66e-20;42!CL:0002368;1.57e-16;13!CL:0002159;9.35e-16;14!CL:0002251;1.43e-12;20!CL:0000622;2.02e-10;5!CL:0002202;9.08e-10;9!CL:0002632;9.08e-10;9!CL:0000240;1.29e-08;6!CL:0000311;1.29e-08;6!CL:0000079;1.29e-08;6!CL:0000237;1.29e-08;6!CL:0000154;1.40e-08;6!CL:0000244;3.21e-08;4!CL:0000731;3.21e-08;4!CL:0000362;9.49e-08;9!CL:0002621;2.47e-07;3!CL:0002166;3.47e-07;3!CL:0002623;7.82e-07;3!CL:0000312;8.36e-07;5!CL:0000307;9.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.87e-25,42;CL:0000223,4.09e-19,58;CL:0002368,1.64e-16,13;CL:0002159,9.16e-16,14;CL:0002251,1.49e-12,20;CL:0000066,2.55e-12,253;CL:0000622,2.06e-10,5;CL:0002202,9.47e-10,9;CL:0002632,9.47e-10,9;CL:0000240,1.34e-08,6;CL:0000311,1.34e-08,6;CL:0000079,1.34e-08,6;CL:0000237,1.34e-08,6;CL:0000036,1.34e-08,6;CL:0000357,1.34e-08,6;CL:0000114,1.34e-08,6;CL:0000154,1.42e-08,6;CL:0000076,2.02e-08,63;CL:0000244,3.15e-08,4;CL:0000731,3.15e-08,4;CL:0000362,9.73e-08,9;CL:0002621,2.49e-07,3;CL:0002166,3.43e-07,3;CL:0002077,4.89e-07,34;CL:0002623,7.97e-07,3;CL:0000312,8.62e-07,5;CL:0000068,9.12e-07,3;CL:0000069,9.12e-07,3;CL:0000307,9.12e-07,3;CL:0000377,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;7.96e-11;58!CL:0000357;1.29e-08;6!CL:0000114;1.29e-08;6!CL:0000377;9.29e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!5.03e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.22e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.28e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.56e-13!72;UBERON:0000166!8.55e-11!21;UBERON:0000161!2.97e-10!35;UBERON:0004119!2.00e-08!169;UBERON:0000925!2.00e-08!169;UBERON:0006595!2.00e-08!169;UBERON:0000165!5.31e-08!28;UBERON:0000930!5.31e-08!28;UBERON:0003102!6.42e-08!95;UBERON:0005631!8.41e-08!14;UBERON:0000158!8.41e-08!14;UBERON:0004175!9.34e-08!25;UBERON:0000065!3.05e-07!53;UBERON:0001044!9.99e-07!6;UBERON:0003293!9.99e-07!6;UBERON:0003294!9.99e-07!6;UBERON:0010047!9.99e-07!6;UBERON:0000167!9.99e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.44e-14;19!UBERON:0000166;1.44e-14;19!UBERON:0000165;7.00e-14;28!UBERON:0001044;1.82e-10;6!UBERON:0003293;1.82e-10;6!UBERON:0003294;1.82e-10;6!UBERON:0010047;1.82e-10;6!UBERON:0003408;1.82e-10;6!UBERON:0000167;1.82e-10;6!UBERON:0000365;8.78e-10;5!UBERON:0000486;1.10e-09;12!UBERON:0007196;1.60e-08;15!UBERON:0001558;1.60e-08;15!UBERON:0005910;4.64e-08;6!UBERON:0000974;5.35e-08;6!UBERON:0004175;1.32e-07;21!UBERON:0001004;1.70e-07;65!UBERON:0001949;2.47e-07;3!UBERON:0003729;2.92e-07;13!UBERON:0001041;3.42e-07;14!UBERON:0000344;9.10e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.22e-18,74;UBERON:0000161,1.67e-17,36;UBERON:0000166,3.20e-16,22;UBERON:0003102,7.79e-16,99;UBERON:0004119,2.03e-13,160;UBERON:0000925,2.03e-13,160;UBERON:0006595,2.03e-13,160;UBERON:0000165,3.43e-13,29;UBERON:0000930,3.43e-13,29;UBERON:0000153,2.25e-12,62;UBERON:0007811,2.25e-12,62;UBERON:0001044,2.24e-10,6;UBERON:0003293,2.24e-10,6;UBERON:0003294,2.24e-10,6;UBERON:0010047,2.24e-10,6;UBERON:0000167,2.24e-10,6;UBERON:0003408,2.93e-10,10;UBERON:0000365,8.63e-10,5;UBERON:0000033,8.95e-10,56;UBERON:0000065,1.29e-09,54;UBERON:0004175,1.43e-08,25;UBERON:0007196,1.70e-08,15;UBERON:0001558,1.70e-08,15;UBERON:0000974,2.37e-08,10;UBERON:0001444,3.98e-08,49;UBERON:0005910,4.57e-08,6;UBERON:0001007,6.67e-08,145;UBERON:0001555,6.67e-08,145;UBERON:0007026,6.67e-08,145;UBERON:0001949,2.49e-07,3;UBERON:0006562,2.90e-07,11;UBERON:0003729,2.95e-07,13;UBERON:0005181,6.50e-07,35;UBERON:0000072,6.55e-07,47;UBERON:0004921,7.37e-07,118;UBERON:0000344,9.14e-07,20 | |||
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| |||
|short_description=p2@AMOTL1 | |||
}} |
Revision as of 20:14, 10 September 2013
Short description: | p2@AMOTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AMOTL1_5end |
Coexpression cluster: | C1158_Small_malignant_Gingival_Keratinocyte_cervical_Mallassezderived_oral |
Association with transcript: | 9bp_to_ENST00000299004_5end |
EntrezGene: | AMOTL1 |
HGNC: | 17811 |
UniProt: | F8WDH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.22e-18 | 74 |
orifice | 1.67e-17 | 36 |
oral opening | 3.20e-16 | 22 |
surface structure | 7.79e-16 | 99 |
endoderm-derived structure | 2.03e-13 | 160 |
endoderm | 2.03e-13 | 160 |
presumptive endoderm | 2.03e-13 | 160 |
mouth | 3.43e-13 | 29 |
stomodeum | 3.43e-13 | 29 |
anterior region of body | 2.25e-12 | 62 |
craniocervical region | 2.25e-12 | 62 |
saliva-secreting gland | 2.24e-10 | 6 |
gland of oral region | 2.24e-10 | 6 |
gland of foregut | 2.24e-10 | 6 |
oral gland | 2.24e-10 | 6 |
oral cavity | 2.24e-10 | 6 |
gland of gut | 2.93e-10 | 10 |
urothelium | 8.63e-10 | 5 |
head | 8.95e-10 | 56 |
respiratory tract | 1.29e-09 | 54 |
internal genitalia | 1.43e-08 | 25 |
tracheobronchial tree | 1.70e-08 | 15 |
lower respiratory tract | 1.70e-08 | 15 |
neck | 2.37e-08 | 10 |
subdivision of head | 3.98e-08 | 49 |
transitional epithelium | 4.57e-08 | 6 |
digestive system | 6.67e-08 | 145 |
digestive tract | 6.67e-08 | 145 |
primitive gut | 6.67e-08 | 145 |
gingival epithelium | 2.49e-07 | 3 |
pharynx | 2.90e-07 | 11 |
mouth mucosa | 2.95e-07 | 13 |
thoracic segment organ | 6.50e-07 | 35 |
segment of respiratory tract | 6.55e-07 | 47 |
subdivision of digestive tract | 7.37e-07 | 118 |
mucosa | 9.14e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.28e-15 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.