FFCP PHASE1:Hg19::chr11:86519290..86519308,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1006|description=CAGE_peak_at_chr11:86519290..86519308,+|id=chr11:86519290..86519308,+|ontology_enrichment_celltype=CL:0000055!2.27e-14!180;CL:0000222!1.69e-12!119;CL:0000057!6.38e-12!75;CL:0000220!3.90e-10!246;CL:0002321!5.12e-10!248;CL:0000213!1.93e-08!57;CL:0000215!1.93e-08!57;CL:0000548!1.34e-07!679;CL:0000004!1.34e-07!679;CL:0000255!1.34e-07!679;CL:0002139!1.58e-07!24;CL:0000012!3.26e-07!682;CL:0000066!4.05e-07!254|ontology_enrichment_celltype_v019=CL:0000135;1.03e-07;3!CL:0000388;1.03e-07;3!CL:0002615;3.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0000222,7.24e-08,121;CL:0000135,9.32e-08,3;CL:0000388,9.32e-08,3;CL:0000115,2.75e-07,36;CL:0000213,3.60e-07,58;CL:0000215,3.60e-07,58;CL:0002615,5.98e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.06e-07;3!DOID:127;1.06e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,9.52e-08,3;DOID:127,9.52e-08,3|ontology_enrichment_uberon=UBERON:0002049!3.26e-16!79;UBERON:0007798!3.26e-16!79;UBERON:0000055!8.40e-14!69;UBERON:0004535!2.52e-13!110;UBERON:0003914!3.44e-13!118;UBERON:0001981!7.17e-13!60;UBERON:0007500!7.17e-13!60;UBERON:0004537!7.17e-13!60;UBERON:0006965!7.17e-13!60;UBERON:0001009!9.98e-13!113;UBERON:0004872!9.33e-12!84;UBERON:0001637!4.98e-10!42;UBERON:0003509!4.98e-10!42;UBERON:0004572!4.98e-10!42;UBERON:0000477!2.15e-09!286;UBERON:0002100!3.91e-08!216;UBERON:0000490!4.23e-08!138;UBERON:0004573!5.78e-08!33;UBERON:0004571!5.78e-08!33|ontology_enrichment_uberon_v019=UBERON:0003688;1.28e-11;6!UBERON:0002358;1.28e-11;6!UBERON:0003684;1.28e-11;6!UBERON:0001178;1.28e-11;6!UBERON:0007846;1.03e-07;3!UBERON:0000043;1.03e-07;3!UBERON:0007845;1.03e-07;3!UBERON:0004457;1.83e-07;9!UBERON:0000042;1.83e-07;9!UBERON:0001737;7.89e-07;9!UBERON:0001557;7.89e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-11,6;UBERON:0002358,1.18e-11,6;UBERON:0003684,1.18e-11,6;UBERON:0001178,1.18e-11,6;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0000055,4.17e-10,68;UBERON:0007500,2.10e-09,59;UBERON:0001981,2.10e-09,59;UBERON:0004537,2.10e-09,59;UBERON:0006965,2.10e-09,59;UBERON:0004535,1.08e-08,109;UBERON:0001009,2.92e-08,112;UBERON:0004872,4.25e-08,83;UBERON:0007846,9.32e-08,3;UBERON:0000043,9.32e-08,3;UBERON:0007845,9.32e-08,3;UBERON:0001637,2.26e-07,42;UBERON:0003509,2.26e-07,42;UBERON:0004572,2.26e-07,42;UBERON:0003914,4.60e-07,117;UBERON:0001737,7.93e-07,9|phase1_expression=0.54503513781167,4.06790995392868,1.12763523276777,3.00219895059391,4.02264984984559,5.23403114460221,2.53299878168311,0,0,0.245733936501509,0,0,1.05506791291381,0.74259811776028,0.994192127183747,2.01697543935533,0,0,0.975865597581014,0.123121058076788,0.816002764977012,0.313454721478088,0,0.410623275218653,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,1.34140171940727,0.12786256184353,0.722878304769133,3.00802746381534,1.73815822752988,0,0.486634870302636,0.472674085820339,3.54767035940102,1.84453049955565,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,1.6507082516404,2.29894463190492,0.516833518338658,1.06729878806013,0,1.61131726843659,0,1.70843440283719,0.735326160691737,2.43042584364528,0.267899184852239,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0,0.379891534993739,0.529636723252875,2.86836620748814,2.12801029319014,0.560677600142307,1.06748995729705,1.48000529050296,0,0.404132016209064,1.30769522490767,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0,0.61246251376468,0.491337269247072,0.103325781175765,1.18800285728205,1.7308685049499,0,0.718618141816238,0.505008341862199,0.750711119231785,0,0.438977620880838,2.14541457059314,0.45071417671979,0.794025282120147,1.25572744982203,0.640672166455702,0.423863802319124,0.300091096084402,0,1.03056216018252,0.37223371266318,0.675105328965065,0,0.504867548488229,0.184099797284599,0.646584227275248,0,0.302256294682921,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0.252320850875628,0,0,5.78916844373597,0,1.39310378409594,0.721879481669586,1.41968160047813,1.51726221070292,0.241011029883482,1.98529150918309,0.653638332277218,1.18635309555548,1.07865046528132,1.17732879075208,0.38474715694639,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0,0,0,0,0,0.463721619900307,0.117408694235822,1.01056513432752,0.925971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2716726,8.31916131536553,5.19151874548547,0,0,0,0,0,0.36757959813938,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0.213233981900981,0,0,0,0.784923038064294,0,0,0,0.684466602170562,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,0,0.538951212639521,0,0,0.406896178315738,0,0.402547587182052,0|short_description=p@chr11:86519290..86519308,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1006 | |||
|description=CAGE_peak_at_chr11:86519290..86519308,+ | |||
|id=chr11:86519290..86519308,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.27e-14!180;CL:0000222!1.69e-12!119;CL:0000057!6.38e-12!75;CL:0000220!3.90e-10!246;CL:0002321!5.12e-10!248;CL:0000213!1.93e-08!57;CL:0000215!1.93e-08!57;CL:0000548!1.34e-07!679;CL:0000004!1.34e-07!679;CL:0000255!1.34e-07!679;CL:0002139!1.58e-07!24;CL:0000012!3.26e-07!682;CL:0000066!4.05e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.03e-07;3!CL:0000388;1.03e-07;3!CL:0002615;3.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.24e-08,121;CL:0000135,9.32e-08,3;CL:0000388,9.32e-08,3;CL:0000115,2.75e-07,36;CL:0000213,3.60e-07,58;CL:0000215,3.60e-07,58;CL:0002615,5.98e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.06e-07;3!DOID:127;1.06e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.52e-08,3;DOID:127,9.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.26e-16!79;UBERON:0007798!3.26e-16!79;UBERON:0000055!8.40e-14!69;UBERON:0004535!2.52e-13!110;UBERON:0003914!3.44e-13!118;UBERON:0001981!7.17e-13!60;UBERON:0007500!7.17e-13!60;UBERON:0004537!7.17e-13!60;UBERON:0006965!7.17e-13!60;UBERON:0001009!9.98e-13!113;UBERON:0004872!9.33e-12!84;UBERON:0001637!4.98e-10!42;UBERON:0003509!4.98e-10!42;UBERON:0004572!4.98e-10!42;UBERON:0000477!2.15e-09!286;UBERON:0002100!3.91e-08!216;UBERON:0000490!4.23e-08!138;UBERON:0004573!5.78e-08!33;UBERON:0004571!5.78e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.28e-11;6!UBERON:0002358;1.28e-11;6!UBERON:0003684;1.28e-11;6!UBERON:0001178;1.28e-11;6!UBERON:0007846;1.03e-07;3!UBERON:0000043;1.03e-07;3!UBERON:0007845;1.03e-07;3!UBERON:0004457;1.83e-07;9!UBERON:0000042;1.83e-07;9!UBERON:0001737;7.89e-07;9!UBERON:0001557;7.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-11,6;UBERON:0002358,1.18e-11,6;UBERON:0003684,1.18e-11,6;UBERON:0001178,1.18e-11,6;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0000055,4.17e-10,68;UBERON:0007500,2.10e-09,59;UBERON:0001981,2.10e-09,59;UBERON:0004537,2.10e-09,59;UBERON:0006965,2.10e-09,59;UBERON:0004535,1.08e-08,109;UBERON:0001009,2.92e-08,112;UBERON:0004872,4.25e-08,83;UBERON:0007846,9.32e-08,3;UBERON:0000043,9.32e-08,3;UBERON:0007845,9.32e-08,3;UBERON:0001637,2.26e-07,42;UBERON:0003509,2.26e-07,42;UBERON:0004572,2.26e-07,42;UBERON:0003914,4.60e-07,117;UBERON:0001737,7.93e-07,9 | |||
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| |||
|short_description=p@chr11:86519290..86519308,+ | |||
}} |
Revision as of 20:04, 10 September 2013
Short description: | p@chr11:86519290..86519308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86519290..86519308, + |
Coexpression cluster: | C1006_Adipocyte_Olfactory_Preadipocyte_tenocyte_Hair_meningioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.24e-08 | 121 |
fibrocyte | 9.32e-08 | 3 |
tendon cell | 9.32e-08 | 3 |
endothelial cell | 2.75e-07 | 36 |
lining cell | 3.60e-07 | 58 |
barrier cell | 3.60e-07 | 58 |
adipocyte of omentum tissue | 5.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.18e-11 | 6 |
peritoneum | 1.18e-11 | 6 |
abdominal cavity | 1.18e-11 | 6 |
visceral peritoneum | 1.18e-11 | 6 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
vessel | 4.17e-10 | 68 |
epithelial tube open at both ends | 2.10e-09 | 59 |
blood vessel | 2.10e-09 | 59 |
blood vasculature | 2.10e-09 | 59 |
vascular cord | 2.10e-09 | 59 |
cardiovascular system | 1.08e-08 | 109 |
circulatory system | 2.92e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 4.25e-08 | 83 |
dense regular connective tissue | 9.32e-08 | 3 |
tendon | 9.32e-08 | 3 |
regular connective tissue | 9.32e-08 | 3 |
artery | 2.26e-07 | 42 |
arterial blood vessel | 2.26e-07 | 42 |
arterial system | 2.26e-07 | 42 |
epithelial tube | 4.60e-07 | 117 |
larynx | 7.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.52e-08 | 3 |
leiomyoma | 9.52e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.