FFCP PHASE1:Hg19::chr11:65819813..65819855,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10992|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10769|TSSclassifier=S|UniProt=Q13435,E9PJT3,E9PJ04|association_with_transcript=0bp_to_ENST00000355456,ENST00000524627,ENST00000531041,ENST00000533595,NM_006842,uc001ogx.1,uc001ogy.1_5end|description=CAGE_peak_1_at_SF3B2_5end|id=chr11:65819813..65819855,+|ontology_enrichment_celltype=CL:0000548!1.45e-14!679;CL:0000004!1.45e-14!679;CL:0000255!1.45e-14!679;CL:0000012!8.90e-14!682;CL:0000055!7.86e-12!180;CL:0000066!7.59e-09!254;CL:0000003!9.92e-09!722;CL:0000144!1.50e-08!625;CL:0002371!7.63e-08!591;CL:1000449!1.94e-07!16;CL:0000076!3.20e-07!62;CL:0002321!6.74e-07!248|ontology_enrichment_celltype_v019=CL:1000449;1.64e-07;15|ontology_enrichment_celltype_v019_2=CL:0000066,9.17e-09,253;CL:1000449,1.69e-07,15;CL:0002321,4.05e-07,250;CL:0000076,5.26e-07,63|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!8.19e-08!312;UBERON:0004211!1.94e-07!16;UBERON:0001285!1.94e-07!16;UBERON:0007684!1.94e-07!16;UBERON:0003220!1.94e-07!16;UBERON:0004208!1.94e-07!16;UBERON:0000483!3.77e-07!309|ontology_enrichment_uberon_v019=UBERON:0006555;1.64e-07;15!UBERON:0004819;1.64e-07;15!UBERON:0001285;1.64e-07;15!UBERON:0007684;1.64e-07;15!UBERON:0006554;9.62e-07;30!UBERON:0001008;9.62e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.69e-07,15;UBERON:0009773,1.69e-07,15;UBERON:0001231,1.69e-07,15;UBERON:0001285,1.69e-07,15;UBERON:0007684,1.69e-07,15;UBERON:0004208,1.69e-07,15;UBERON:0000119,4.40e-07,309|phase1_expression=131.353468212612,119.68219285506,120.516015502055,109.079895204912,88.9452577910303,102.935945843844,106.38594883069,163.615447217549,171.337772099094,272.02746770717,254.697426309936,250.770695205438,250.842396295259,161.886389671741,149.128819077562,133.792704143903,128.373934469107,119.770854823529,107.833148532702,309.280097888891,246.432835023058,234.150676944132,155.998612986426,169.450538240231,162.828803554459,218.92440746788,228.650141618099,226.76576096471,173.867010367216,131.269654149247,168.904390537839,157.221029385897,178.313903916724,163.061518483553,146.103140294449,112.598032130038,118.027376612609,130.742916413523,160.235013528643,129.338478946648,103.448949098845,107.208803452282,98.6514424038935,126.93266245456,142.081354826992,137.78774675468,132.252121999335,122.939198518526,127.908731179678,119.392342813692,112.198389459746,108.072379059083,113.421328962348,127.160482666014,100.215600079813,144.193632089635,139.455042679559,101.799738453623,129.473486472892,122.915817370144,111.883997014832,148.762936384209,125.662104301628,137.67059442206,119.566206314977,114.61181538761,140.135006024004,117.584375340156,118.898105399806,105.770967371392,116.84210400824,104.222570984481,88.9259308708885,115.134131040008,118.845803680459,113.844644511048,130.638198023374,129.152127843695,149.956972388376,72.6782496540184,106.221505624314,106.127873337252,98.5578968983407,98.8510886384458,105.851601209763,82.3589329553359,90.0890970831028,89.0866281929449,92.5462821898807,83.956730399112,117.827084605656,137.4135023128,116.21106135007,105.737062863221,111.541204033326,112.991772368508,132.582385056723,117.510218062,130.556951864688,110.343086957848,98.7544467899779,82.3799181978436,107.154700624351,123.888428056313,101.049826263869,104.785532138053,133.506304836153,115.282187753108,108.729614560058,118.724167123854,100.591406474049,137.366662638415,115.811805829569,108.621576204424,124.397273327922,132.23200292806,90.4400364900534,95.1848023986885,124.738708165615,94.2953626399326,98.3136015323192,101.698368755976,102.692231211041,114.548016983204,131.177262879963,116.257630753612,106.746639599736,141.729540486987,139.068901807424,117.742240356716,80.4562658836074,130.115966782505,129.141187461966,107.708867410601,157.921441850305,126.016471495917,177.348766192395,143.557286739278,145.961757701321,145.897943530367,137.637109181129,183.108747545802,259.37824526429,217.65046791446,104.504260756808,114.403237405619,97.591143020847,142.8558839589,125.266885460848,128.1528379587,181.072553111068,172.907153616331,207.590019961341,175.810769938367,130.044825225071,159.293346283299,185.378535318151,127.399462270479,125.229724465722,135.561848169691,131.322357377582,120.883264809243,150.586289507221,162.87474459322,149.066118410244,157.16752177998,140.555387263982,144.593140940586,157.91613658986,207.88917944542,149.492623047212,177.903563538685,124.089684527464,249.009703773387,92.9337549670246,150.310417345856,158.36138025261,172.675645690786,152.152735963095,161.475148840984,239.117750434539,123.087106660163,152.804618381285,114.773492603374,136.654151002852,225.522567190948,167.0910180992,430.917113142352,147.963876417572,248.72571419338,149.299231871249,185.781376854436,177.250874083104,177.108467251535,149.032545016072,143.83898557208,168.937652222376,147.312354302975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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10769 | |||
|TSSclassifier=S | |||
|UniProt=Q13435,E9PJT3,E9PJ04 | |||
|association_with_transcript=0bp_to_ENST00000355456,ENST00000524627,ENST00000531041,ENST00000533595,NM_006842,uc001ogx.1,uc001ogy.1_5end | |||
|description=CAGE_peak_1_at_SF3B2_5end | |||
|id=chr11:65819813..65819855,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.45e-14!679;CL:0000004!1.45e-14!679;CL:0000255!1.45e-14!679;CL:0000012!8.90e-14!682;CL:0000055!7.86e-12!180;CL:0000066!7.59e-09!254;CL:0000003!9.92e-09!722;CL:0000144!1.50e-08!625;CL:0002371!7.63e-08!591;CL:1000449!1.94e-07!16;CL:0000076!3.20e-07!62;CL:0002321!6.74e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.64e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.17e-09,253;CL:1000449,1.69e-07,15;CL:0002321,4.05e-07,250;CL:0000076,5.26e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.19e-08!312;UBERON:0004211!1.94e-07!16;UBERON:0001285!1.94e-07!16;UBERON:0007684!1.94e-07!16;UBERON:0003220!1.94e-07!16;UBERON:0004208!1.94e-07!16;UBERON:0000483!3.77e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.64e-07;15!UBERON:0004819;1.64e-07;15!UBERON:0001285;1.64e-07;15!UBERON:0007684;1.64e-07;15!UBERON:0006554;9.62e-07;30!UBERON:0001008;9.62e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.69e-07,15;UBERON:0009773,1.69e-07,15;UBERON:0001231,1.69e-07,15;UBERON:0001285,1.69e-07,15;UBERON:0007684,1.69e-07,15;UBERON:0004208,1.69e-07,15;UBERON:0000119,4.40e-07,309 | |||
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| |||
|short_description=p1@SF3B2 | |||
}} |
Revision as of 19:05, 10 September 2013
Short description: | p1@SF3B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SF3B2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355456, ENST00000524627, ENST00000531041, ENST00000533595, NM_006842, uc001ogx.1, uc001ogy.1_5end |
EntrezGene: | SF3B2 |
HGNC: | 10769 |
UniProt: | Q13435E9PJT3E9PJ04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.17e-09 | 253 |
epithelial cell of nephron | 1.69e-07 | 15 |
embryonic cell | 4.05e-07 | 250 |
squamous epithelial cell | 5.26e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.69e-07 | 15 |
renal tubule | 1.69e-07 | 15 |
nephron tubule | 1.69e-07 | 15 |
nephron | 1.69e-07 | 15 |
uriniferous tubule | 1.69e-07 | 15 |
nephrogenic mesenchyme | 1.69e-07 | 15 |
cell layer | 4.40e-07 | 309 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.