FFCP PHASE1:Hg19::chr11:65265673..65265687,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=378938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=29665|TSSclassifier=W|UniProt=|association_with_transcript=440bp_to_ENST00000534336,NR_002819,uc010roh.1_5end|description=CAGE_peak_5_at_MALAT1_5end|id=chr11:65265673..65265687,+|ontology_enrichment_celltype=CL:0000738!3.91e-10!140;CL:0002031!3.96e-09!124;CL:0002087!2.75e-08!119;CL:0000838!5.58e-08!52;CL:0000542!1.86e-07!53;CL:0000051!1.86e-07!53;CL:0000236!5.16e-07!14|ontology_enrichment_celltype_v019=CL:0000236;5.39e-11;13!CL:0000791;8.30e-07;18!CL:0000789;8.30e-07;18!CL:0002419;8.30e-07;18|ontology_enrichment_celltype_v019_2=CL:0000236,1.01e-09,14;CL:0000838,3.13e-09,52;CL:0000542,7.18e-09,53;CL:0000051,7.18e-09,53;CL:0000791,1.33e-07,18;CL:0000789,1.33e-07,18;CL:0002420,1.33e-07,18;CL:0002419,1.33e-07,18;CL:0000790,1.33e-07,18;CL:0000738,8.21e-07,136|ontology_enrichment_development_v019=CL:0000790;8.30e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.03e-16!115|ontology_enrichment_uberon_v019=UBERON:0004921;2.66e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-14,114|phase1_expression=0.726713517082227,0.214100523890983,0.986680828671798,4.00293193412522,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0.572471974262113,0.684372125364421,0.753255837568817,0.305653622991805,0.164201178899891,0.157421562627358,0.786728553697808,1.15148819429164,0.928896739896456,0,0.30120591877825,0,1.08454080812422,0,0.587200878669695,2.21598163412751,2.20598892217156,1.30206522429511,0.671746422719773,0.32389366601898,0,1.01778767145695,0.755751887377619,1.69808842831471,0.464858073811369,1.23350366406548,0.309706370895104,1.1507695692886,0.512321413058201,1.89185783910868,0.344745680736619,0.645484683583826,0,1.12945403725563,0.272906150057846,1.57306439111559,0.918251677112708,0.962787081228281,1.27867425159808,0.989553900560148,0.797854630486527,0.852449501065388,2.03146467040009,2.8369261234557,0.622822248995575,1.25624332628372,1.0429658368404,1.08594422352558,1.21079900526674,0,1.89877432464531,0.422510572623884,0.850417199860174,0.209658645508376,0.336985893439485,0.300353785683013,0.32145117339416,2.28010194992999,0.99458338599545,1.27864907635244,7.03984977845291,10.3766336139805,8.89509253863555,4.69403244823158,6.4063357925762,6.8970292794538,3.96626923670917,8.58648379081828,6.26134266020393,3.52342313622563,8.02773779062981,1.32171328579026,0.560508562981536,0.263384084775077,2.360517241366,0.393010762749165,1.85041349099558,2.00623794468814,1.95553359980154,1.89379122293893,1.94826728407911,1.55974639639243,3.53527088969805,3.32300841875432,5.1452734115353,0.896639238079726,2.08094956095805,0.328875809207352,0.276350017785848,0.289803085735052,1.18629250529648,1.07016331235885,2.09071047609954,0.906474741580529,1.91610246800961,2.06176467289578,3.28925599625354,0.95569624297229,2.60433381542567,2.85135613334512,1.80690142893327,2.30375900077953,1.24930726552346,1.89421801635213,4.10563998460523,3.62892137804518,1.87208137048455,1.30341963494519,0,0,0,1.0843174571537,0.50133791063589,0.144846518960824,0,0,0.472674085820339,0,0.43917392846563,0.851363990735132,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,1.22031028774085,0.367663080345869,0,0.446498641420399,0.44905874525234,0.112611480483322,0,0,0.183201743930407,3.9534125230819,0,0,0,0.12663051166458,1.72131935057184,2.0078563452417,1.06400514659507,0,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0.140450806702248,0.61246251376468,0.122834317311768,0.826606249406124,0,0,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.901428353439581,0,2.15267562826634,1.06778694409284,0.635795703478686,0.300091096084402,0.412210116953756,1.8034837803194,0.18611685633159,1.18143432568886,0.292311015483596,1.00973509697646,0.644349290496095,1.2931684545505,2.13005755509969,0.302256294682921,0,0,0.545492241181669,0,0.731842236777572,1.19276791489337,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,1.39310378409594,1.44375896333917,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0,0,0,0.769494313892781,0.738155454624648,0,0,0,8.87285243752816,0.982827216677626,2.36315962672562,0.441463099414651,3.44367627920718,0,0.219500570817251,1.1240175325762,0.201057944823262,0.277765335475589,0,1.03993478527958,0,0.579652024875384,0,0,0,0,5.53143078571493,2.57545848628462,0.492434012174795,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,2.95597942737566,0.528290604079356,0.829312462163088,0.576479813667846,0.50496973370552,0,0,0,0,0.205654985406647,0,0.57165286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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=378938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29665 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=440bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | |||
|description=CAGE_peak_5_at_MALAT1_5end | |||
|id=chr11:65265673..65265687,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.91e-10!140;CL:0002031!3.96e-09!124;CL:0002087!2.75e-08!119;CL:0000838!5.58e-08!52;CL:0000542!1.86e-07!53;CL:0000051!1.86e-07!53;CL:0000236!5.16e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.39e-11;13!CL:0000791;8.30e-07;18!CL:0000789;8.30e-07;18!CL:0002419;8.30e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.01e-09,14;CL:0000838,3.13e-09,52;CL:0000542,7.18e-09,53;CL:0000051,7.18e-09,53;CL:0000791,1.33e-07,18;CL:0000789,1.33e-07,18;CL:0002420,1.33e-07,18;CL:0002419,1.33e-07,18;CL:0000790,1.33e-07,18;CL:0000738,8.21e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;8.30e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-16!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.66e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-14,114 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.986680828671798,4.00293193412522,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0.572471974262113,0.684372125364421,0.753255837568817,0.305653622991805,0.164201178899891,0.157421562627358,0.786728553697808,1.15148819429164,0.928896739896456,0,0.30120591877825,0,1.08454080812422,0,0.587200878669695,2.21598163412751,2.20598892217156,1.30206522429511,0.671746422719773,0.32389366601898,0,1.01778767145695,0.755751887377619,1.69808842831471,0.464858073811369,1.23350366406548,0.309706370895104,1.1507695692886,0.512321413058201,1.89185783910868,0.344745680736619,0.645484683583826,0,1.12945403725563,0.272906150057846,1.57306439111559,0.918251677112708,0.962787081228281,1.27867425159808,0.989553900560148,0.797854630486527,0.852449501065388,2.03146467040009,2.8369261234557,0.622822248995575,1.25624332628372,1.0429658368404,1.08594422352558,1.21079900526674,0,1.89877432464531,0.422510572623884,0.850417199860174,0.209658645508376,0.336985893439485,0.300353785683013,0.32145117339416,2.28010194992999,0.99458338599545,1.27864907635244,7.03984977845291,10.3766336139805,8.89509253863555,4.69403244823158,6.4063357925762,6.8970292794538,3.96626923670917,8.58648379081828,6.26134266020393,3.52342313622563,8.02773779062981,1.32171328579026,0.560508562981536,0.263384084775077,2.360517241366,0.393010762749165,1.85041349099558,2.00623794468814,1.95553359980154,1.89379122293893,1.94826728407911,1.55974639639243,3.53527088969805,3.32300841875432,5.1452734115353,0.896639238079726,2.08094956095805,0.328875809207352,0.276350017785848,0.289803085735052,1.18629250529648,1.07016331235885,2.09071047609954,0.906474741580529,1.91610246800961,2.06176467289578,3.28925599625354,0.95569624297229,2.60433381542567,2.85135613334512,1.80690142893327,2.30375900077953,1.24930726552346,1.89421801635213,4.10563998460523,3.62892137804518,1.87208137048455,1.30341963494519,0,0,0,1.0843174571537,0.50133791063589,0.144846518960824,0,0,0.472674085820339,0,0.43917392846563,0.851363990735132,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,1.22031028774085,0.367663080345869,0,0.446498641420399,0.44905874525234,0.112611480483322,0,0,0.183201743930407,3.9534125230819,0,0,0,0.12663051166458,1.72131935057184,2.0078563452417,1.06400514659507,0,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0.140450806702248,0.61246251376468,0.122834317311768,0.826606249406124,0,0,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.901428353439581,0,2.15267562826634,1.06778694409284,0.635795703478686,0.300091096084402,0.412210116953756,1.8034837803194,0.18611685633159,1.18143432568886,0.292311015483596,1.00973509697646,0.644349290496095,1.2931684545505,2.13005755509969,0.302256294682921,0,0,0.545492241181669,0,0.731842236777572,1.19276791489337,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,1.39310378409594,1.44375896333917,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0,0,0,0.769494313892781,0.738155454624648,0,0,0,8.87285243752816,0.982827216677626,2.36315962672562,0.441463099414651,3.44367627920718,0,0.219500570817251,1.1240175325762,0.201057944823262,0.277765335475589,0,1.03993478527958,0,0.579652024875384,0,0,0,0,5.53143078571493,2.57545848628462,0.492434012174795,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,2.95597942737566,0.528290604079356,0.829312462163088,0.576479813667846,0.50496973370552,0,0,0,0,0.205654985406647,0,0.571652865261156,0,0,0,0.517086863031111,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0.448340575974109,1.57624608161542,0.862510299438069,2.05348858047597,1.77866236955724,0,0,0.167516265334349,1.91381625495949,2.24702107184155,0,3.31532410748828,0,0,0,0.415941723061614,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,3.3082884179662,2.80428461064202,1.921096040462,1.21251028578504,0,0.30239029332968,0,1.53461973288062,0.561320188866147,1.40953064181271,0.511707249066704,0.321707842287215,0,0,0.355123450626254,0,0,0.116210378459959,1.81289174387433,0.200506470303285,0.920809889358963,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0,4.16593765627276,1.8300481571743,0,0.328014645699706,0,2.88514832613622,0.0915694648183434,0.41254749960294,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0.826424576804891,0.576570202095319,1.14851441245126,1.11273558941105,0,1.25924938732256,0,0,0,0,0.18532421910392,0.858749320451947,0.372158369359667,0,0.190630193923825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| |||
|short_description=p5@MALAT1 | |||
}} |
Revision as of 18:57, 10 September 2013
Short description: | p5@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MALAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 440bp_to_ENST00000534336, NR_002819, uc010roh.1_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.01e-09 | 14 |
lymphoid lineage restricted progenitor cell | 3.13e-09 | 52 |
lymphocyte | 7.18e-09 | 53 |
common lymphoid progenitor | 7.18e-09 | 53 |
mature alpha-beta T cell | 1.33e-07 | 18 |
alpha-beta T cell | 1.33e-07 | 18 |
immature T cell | 1.33e-07 | 18 |
mature T cell | 1.33e-07 | 18 |
immature alpha-beta T cell | 1.33e-07 | 18 |
leukocyte | 8.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-14 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.